RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 CTTNBP2Q8WZ74 1663 aa24.88■■□□□ 1.57
CLDND1-222ENST00000510545 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
CLDND1-222ENST00000510545 P3H3Q8IVL6 736 aa24.82■■□□□ 1.56
CLDND1-222ENST00000510545 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
CLDND1-222ENST00000510545 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
CLDND1-222ENST00000510545 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
CLDND1-222ENST00000510545 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
CLDND1-222ENST00000510545 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
CLDND1-222ENST00000510545 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
CLDND1-222ENST00000510545 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
CLDND1-222ENST00000510545 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
CLDND1-222ENST00000510545 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
CLDND1-222ENST00000510545 TIAM1Q13009 1591 aa24.65■■□□□ 1.54
CLDND1-222ENST00000510545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-222ENST00000510545 MAP3K1Q13233 1512 aa24.64■■□□□ 1.54
CLDND1-222ENST00000510545 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
CLDND1-222ENST00000510545 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-222ENST00000510545 IQGAP2Q13576 1575 aa24.59■■□□□ 1.53
CLDND1-222ENST00000510545 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.53
CLDND1-222ENST00000510545 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.53
CLDND1-222ENST00000510545 FMN1Q68DA7 1419 aa24.58■■□□□ 1.52
CLDND1-222ENST00000510545 ATP1B4Q9UN42 357 aaPredicted RBP24.56■■□□□ 1.52
CLDND1-222ENST00000510545 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
CLDND1-222ENST00000510545 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
CLDND1-222ENST00000510545 LRRC9Q6ZRR7 1453 aa24.55■■□□□ 1.52
CLDND1-222ENST00000510545 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
CLDND1-222ENST00000510545 CCER1Q8TC90 406 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-222ENST00000510545 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
CLDND1-222ENST00000510545 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
CLDND1-222ENST00000510545 KIAA0586Q9BVV6 1533 aa24.49■■□□□ 1.51
CLDND1-222ENST00000510545 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
CLDND1-222ENST00000510545 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
CLDND1-222ENST00000510545 LRRIQ1Q96JM4 1722 aa24.43■■□□□ 1.5
CLDND1-222ENST00000510545 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
CLDND1-222ENST00000510545 FBLN2P98095 1184 aa24.43■■□□□ 1.5
CLDND1-222ENST00000510545 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
CLDND1-222ENST00000510545 PHLDB1Q86UU1 1377 aa24.41■■□□□ 1.5
CLDND1-222ENST00000510545 DISP1Q96F81 1524 aa24.39■■□□□ 1.49
CLDND1-222ENST00000510545 NUP160Q12769 1436 aa24.36■■□□□ 1.49
CLDND1-222ENST00000510545 KIAA0556O60303 1618 aa24.35■■□□□ 1.49
CLDND1-222ENST00000510545 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
CLDND1-222ENST00000510545 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
CLDND1-222ENST00000510545 ITGAEP38570 1179 aa24.25■■□□□ 1.47
CLDND1-222ENST00000510545 CCDC18Q5T9S5 1454 aa24.25■■□□□ 1.47
CLDND1-222ENST00000510545 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
CLDND1-222ENST00000510545 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
CLDND1-222ENST00000510545 EPRSP07814 1512 aaKnown RBP24.24■■□□□ 1.47
CLDND1-222ENST00000510545 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
CLDND1-222ENST00000510545 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.46
CLDND1-222ENST00000510545 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
CLDND1-222ENST00000510545 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
CLDND1-222ENST00000510545 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
CLDND1-222ENST00000510545 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
CLDND1-222ENST00000510545 CHD1O14646 1710 aa24.16■■□□□ 1.46
CLDND1-222ENST00000510545 NUP153P49790 1475 aaKnown RBP24.15■■□□□ 1.46
CLDND1-222ENST00000510545 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
CLDND1-222ENST00000510545 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.46
CLDND1-222ENST00000510545 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
CLDND1-222ENST00000510545 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
CLDND1-222ENST00000510545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.11■■□□□ 1.45
CLDND1-222ENST00000510545 PLB1Q6P1J6 1458 aa24.1■■□□□ 1.45
CLDND1-222ENST00000510545 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
CLDND1-222ENST00000510545 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
CLDND1-222ENST00000510545 RAB3GAP2Q9H2M9 1393 aa24.05■■□□□ 1.44
CLDND1-222ENST00000510545 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-222ENST00000510545 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
CLDND1-222ENST00000510545 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
CLDND1-222ENST00000510545 PTPN23Q9H3S7 1636 aa23.98■■□□□ 1.43
CLDND1-222ENST00000510545 ABCA8O94911 1581 aa23.98■■□□□ 1.43
CLDND1-222ENST00000510545 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
CLDND1-222ENST00000510545 CLSPNQ9HAW4 1339 aa23.94■■□□□ 1.42
CLDND1-222ENST00000510545 TCOF1Q13428 1488 aaKnown RBP23.93■■□□□ 1.42
CLDND1-222ENST00000510545 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-222ENST00000510545 PTPRGP23470 1445 aa23.92■■□□□ 1.42
CLDND1-222ENST00000510545 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
CLDND1-222ENST00000510545 MIA2Q96PC5 1412 aa23.89■■□□□ 1.42
CLDND1-222ENST00000510545 ERCC6L2Q5T890 1561 aa23.89■■□□□ 1.41
CLDND1-222ENST00000510545 ATP10BO94823 1461 aa23.88■■□□□ 1.41
CLDND1-222ENST00000510545 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
CLDND1-222ENST00000510545 KIF14Q15058 1648 aa23.84■■□□□ 1.41
CLDND1-222ENST00000510545 HFM1A2PYH4 1435 aa23.83■■□□□ 1.41
CLDND1-222ENST00000510545 MAPKBP1O60336 1514 aa23.83■■□□□ 1.41
CLDND1-222ENST00000510545 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
CLDND1-222ENST00000510545 NAIPQ13075 1403 aa23.8■■□□□ 1.4
CLDND1-222ENST00000510545 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-222ENST00000510545 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
CLDND1-222ENST00000510545 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
CLDND1-222ENST00000510545 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
CLDND1-222ENST00000510545 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
CLDND1-222ENST00000510545 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
CLDND1-222ENST00000510545 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
CLDND1-222ENST00000510545 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
CLDND1-222ENST00000510545 ABCC5O15440 1437 aa23.7■■□□□ 1.38
CLDND1-222ENST00000510545 DAPK1P53355 1430 aa23.7■■□□□ 1.38
CLDND1-222ENST00000510545 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.38
CLDND1-222ENST00000510545 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
CLDND1-222ENST00000510545 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
CLDND1-222ENST00000510545 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
CLDND1-222ENST00000510545 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
CLDND1-222ENST00000510545 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms