RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 DHX37Q8IY37 1157 aaKnown RBP11.39□□□□□ -0.59
CAST-232ENST00000510500 PUS7Q96PZ0 661 aaKnown RBP11.39□□□□□ -0.59
CAST-232ENST00000510500 AAMPQ13685 434 aa11.37□□□□□ -0.59
CAST-232ENST00000510500 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
CAST-232ENST00000510500 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
CAST-232ENST00000510500 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
CAST-232ENST00000510500 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
CAST-232ENST00000510500 BCCIPQ9P287 314 aaKnown RBP eCLIP11.32□□□□□ -0.6
CAST-232ENST00000510500 DSG3P32926 999 aa11.31□□□□□ -0.6
CAST-232ENST00000510500 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
CAST-232ENST00000510500 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
CAST-232ENST00000510500 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
CAST-232ENST00000510500 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
CAST-232ENST00000510500 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
CAST-232ENST00000510500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.618e-7■■■□□ 15.9
CAST-232ENST00000510500 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
CAST-232ENST00000510500 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
CAST-232ENST00000510500 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
CAST-232ENST00000510500 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
CAST-232ENST00000510500 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CAST-232ENST00000510500 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
CAST-232ENST00000510500 RB1CC1Q8TDY2 1594 aa11.22□□□□□ -0.61
CAST-232ENST00000510500 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
CAST-232ENST00000510500 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.62
CAST-232ENST00000510500 RBM10P98175 930 aaKnown RBP11.19□□□□□ -0.62
CAST-232ENST00000510500 SP7Q8TDD2 431 aaPredicted RBP11.18□□□□□ -0.62
CAST-232ENST00000510500 NAP1L5Q96NT1 182 aaPredicted RBP11.16□□□□□ -0.62
CAST-232ENST00000510500 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
CAST-232ENST00000510500 CCDC136Q96JN2 1154 aa11.15□□□□□ -0.62
CAST-232ENST00000510500 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
CAST-232ENST00000510500 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
CAST-232ENST00000510500 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
CAST-232ENST00000510500 ARID3AQ99856 593 aa11.08□□□□□ -0.64
CAST-232ENST00000510500 CAPN15O75808 1086 aa11.07□□□□□ -0.64
CAST-232ENST00000510500 DEKP35659 375 aaKnown RBP11.06□□□□□ -0.64
CAST-232ENST00000510500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAST-232ENST00000510500 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
CAST-232ENST00000510500 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
CAST-232ENST00000510500 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.65
CAST-232ENST00000510500 PKD2Q13563 968 aa11□□□□□ -0.65
CAST-232ENST00000510500 NACADO15069 1562 aa10.99□□□□□ -0.65
CAST-232ENST00000510500 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
CAST-232ENST00000510500 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
CAST-232ENST00000510500 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
CAST-232ENST00000510500 TICAM2Q86XR7 235 aa10.98□□□□□ -0.65
CAST-232ENST00000510500 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
CAST-232ENST00000510500 UNC13AQ9UPW8 1703 aa10.97□□□□□ -0.65
CAST-232ENST00000510500 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
CAST-232ENST00000510500 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
CAST-232ENST00000510500 RAD21O60216 631 aa10.94□□□□□ -0.66
CAST-232ENST00000510500 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
CAST-232ENST00000510500 CLSTN1O94985 981 aa10.93□□□□□ -0.66
CAST-232ENST00000510500 KCTD17Q8N5Z5 321 aa10.93□□□□□ -0.66
CAST-232ENST00000510500 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.93□□□□□ -0.66
CAST-232ENST00000510500 TEX2Q8IWB9 1127 aa10.93□□□□□ -0.66
CAST-232ENST00000510500 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
CAST-232ENST00000510500 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
CAST-232ENST00000510500 IPO4Q8TEX9 1081 aaKnown RBP10.91□□□□□ -0.66
CAST-232ENST00000510500 NCLP19338 710 aaKnown RBP10.88□□□□□ -0.67
CAST-232ENST00000510500 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
CAST-232ENST00000510500 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
CAST-232ENST00000510500 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
CAST-232ENST00000510500 PSMD1Q99460 953 aa10.86□□□□□ -0.67
CAST-232ENST00000510500 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
CAST-232ENST00000510500 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
CAST-232ENST00000510500 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
CAST-232ENST00000510500 MTMR7Q9Y216 660 aa10.84□□□□□ -0.67
CAST-232ENST00000510500 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
CAST-232ENST00000510500 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
CAST-232ENST00000510500 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
CAST-232ENST00000510500 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
CAST-232ENST00000510500 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
CAST-232ENST00000510500 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
CAST-232ENST00000510500 FAM177A1Q8N128 213 aaPredicted RBP10.8□□□□□ -0.68
CAST-232ENST00000510500 CERS3Q8IU89 383 aa10.79□□□□□ -0.68
CAST-232ENST00000510500 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
CAST-232ENST00000510500 FTSJ3Q8IY81 847 aaKnown RBP10.76□□□□□ -0.69
CAST-232ENST00000510500 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
CAST-232ENST00000510500 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
CAST-232ENST00000510500 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
CAST-232ENST00000510500 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
CAST-232ENST00000510500 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
CAST-232ENST00000510500 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
CAST-232ENST00000510500 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
CAST-232ENST00000510500 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
CAST-232ENST00000510500 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
CAST-232ENST00000510500 TMED8Q6PL24 325 aaPredicted RBP10.72□□□□□ -0.69
CAST-232ENST00000510500 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
CAST-232ENST00000510500 ABCB7O75027 752 aa10.71□□□□□ -0.69
CAST-232ENST00000510500 E9PSI1 815 aa10.7□□□□□ -0.7
CAST-232ENST00000510500 APBB1O00213 710 aa10.7□□□□□ -0.7
CAST-232ENST00000510500 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
CAST-232ENST00000510500 PLCD4Q9BRC7 762 aa10.7□□□□□ -0.7
CAST-232ENST00000510500 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
CAST-232ENST00000510500 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
CAST-232ENST00000510500 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
CAST-232ENST00000510500 PPM1GO15355 546 aaPredicted RBP10.68□□□□□ -0.7
CAST-232ENST00000510500 SETQ01105 290 aaPredicted RBP10.68□□□□□ -0.7
CAST-232ENST00000510500 TMCO4Q5TGY1 634 aa10.68□□□□□ -0.7
CAST-232ENST00000510500 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms