RNA–Protein interactions for RNA: ENST00000510168.5

ATP2C1-218, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ATP2C1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-218ENST00000510168 RTN4Q9NQC3 1192 aaKnown RBP21.87■■□□□ 1.09
ATP2C1-218ENST00000510168 PTMAP06454 111 aaKnown RBP21.87■■□□□ 1.09
ATP2C1-218ENST00000510168 NAP1L5Q96NT1 182 aaPredicted RBP21.86■■□□□ 1.09
ATP2C1-218ENST00000510168 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
ATP2C1-218ENST00000510168 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
ATP2C1-218ENST00000510168 DNTTIP2Q5QJE6 756 aaKnown RBP21.83■■□□□ 1.09
ATP2C1-218ENST00000510168 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
ATP2C1-218ENST00000510168 CDK11BP21127 795 aaKnown RBP21.82■■□□□ 1.08
ATP2C1-218ENST00000510168 PPP4R2Q9NY27 417 aa21.81■■□□□ 1.08
ATP2C1-218ENST00000510168 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
ATP2C1-218ENST00000510168 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
ATP2C1-218ENST00000510168 ABCC9O60706 1549 aa21.79■■□□□ 1.08
ATP2C1-218ENST00000510168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.07
ATP2C1-218ENST00000510168 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
ATP2C1-218ENST00000510168 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
ATP2C1-218ENST00000510168 ZRSR1Q15695 479 aaKnown RBP21.69■■□□□ 1.06
ATP2C1-218ENST00000510168 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
ATP2C1-218ENST00000510168 MTUS2Q5JR59 1369 aa21.67■■□□□ 1.06
ATP2C1-218ENST00000510168 DEKP35659 375 aaKnown RBP21.65■■□□□ 1.06
ATP2C1-218ENST00000510168 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
ATP2C1-218ENST00000510168 RGS3P49796 1198 aa21.62■■□□□ 1.05
ATP2C1-218ENST00000510168 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
ATP2C1-218ENST00000510168 CLIP1P30622 1438 aa21.61■■□□□ 1.05
ATP2C1-218ENST00000510168 B4GALNT3Q6L9W6 998 aa21.58■■□□□ 1.05
ATP2C1-218ENST00000510168 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
ATP2C1-218ENST00000510168 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.04
ATP2C1-218ENST00000510168 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
ATP2C1-218ENST00000510168 PLCB2Q00722 1185 aa21.56■■□□□ 1.04
ATP2C1-218ENST00000510168 RBM19Q9Y4C8 960 aaKnown RBP21.56■■□□□ 1.04
ATP2C1-218ENST00000510168 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
ATP2C1-218ENST00000510168 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
ATP2C1-218ENST00000510168 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
ATP2C1-218ENST00000510168 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
ATP2C1-218ENST00000510168 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
ATP2C1-218ENST00000510168 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
ATP2C1-218ENST00000510168 NRDCO43847 1150 aa21.46■■□□□ 1.03
ATP2C1-218ENST00000510168 NPM1P06748 294 aaKnown RBP eCLIP21.46■■□□□ 1.03
ATP2C1-218ENST00000510168 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
ATP2C1-218ENST00000510168 GOLGA6L6A8MZA4 724 aa21.44■■□□□ 1.02
ATP2C1-218ENST00000510168 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
ATP2C1-218ENST00000510168 NEUROD2Q15784 382 aa21.44■■□□□ 1.02
ATP2C1-218ENST00000510168 RGL3Q3MIN7 710 aa21.44■■□□□ 1.02
ATP2C1-218ENST00000510168 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
ATP2C1-218ENST00000510168 CHMP4BQ9H444 224 aaKnown RBP21.42■■□□□ 1.02
ATP2C1-218ENST00000510168 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
ATP2C1-218ENST00000510168 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
ATP2C1-218ENST00000510168 MS4A1P11836 297 aa21.41■■□□□ 1.02
ATP2C1-218ENST00000510168 HSCBQ8IWL3 235 aa21.41■■□□□ 1.02
ATP2C1-218ENST00000510168 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
ATP2C1-218ENST00000510168 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
ATP2C1-218ENST00000510168 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
ATP2C1-218ENST00000510168 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
ATP2C1-218ENST00000510168 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
ATP2C1-218ENST00000510168 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
ATP2C1-218ENST00000510168 EEA1Q15075 1411 aa21.33■■□□□ 1.01
ATP2C1-218ENST00000510168 PNNQ9H307 717 aaKnown RBP21.33■■□□□ 1
ATP2C1-218ENST00000510168 GOLGA6L4A6NEF3 574 aa21.32■■□□□ 1
ATP2C1-218ENST00000510168 GOLGA3Q08378 1498 aa21.31■■□□□ 1
ATP2C1-218ENST00000510168 ARID4BQ4LE39 1312 aaPredicted RBP21.31■■□□□ 1
ATP2C1-218ENST00000510168 FGD1P98174 961 aa21.28■■□□□ 1
ATP2C1-218ENST00000510168 SCRIBQ14160 1630 aa21.28■■□□□ 1
ATP2C1-218ENST00000510168 ZBTB7CA1YPR0 619 aa21.27■■□□□ 1
ATP2C1-218ENST00000510168 C14orf37Q86TY3 774 aa21.27■■□□□ 1
ATP2C1-218ENST00000510168 A0A0G2JS52 829 aa21.25■□□□□ 0.99
ATP2C1-218ENST00000510168 KCNJ4P48050 445 aa21.25■□□□□ 0.99
ATP2C1-218ENST00000510168 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
ATP2C1-218ENST00000510168 PPP1R15AO75807 674 aaPredicted RBP21.24■□□□□ 0.99
ATP2C1-218ENST00000510168 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
ATP2C1-218ENST00000510168 AMER1Q5JTC6 1135 aaPredicted RBP21.23■□□□□ 0.99
ATP2C1-218ENST00000510168 CC2D1BQ5T0F9 858 aaKnown RBP21.23■□□□□ 0.99
ATP2C1-218ENST00000510168 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.22■□□□□ 0.99
ATP2C1-218ENST00000510168 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
ATP2C1-218ENST00000510168 GBP4Q96PP9 640 aa21.21■□□□□ 0.99
ATP2C1-218ENST00000510168 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
ATP2C1-218ENST00000510168 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
ATP2C1-218ENST00000510168 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
ATP2C1-218ENST00000510168 DRC7Q8IY82 874 aa21.21■□□□□ 0.99
ATP2C1-218ENST00000510168 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
ATP2C1-218ENST00000510168 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
ATP2C1-218ENST00000510168 PTMSP20962 102 aa21.2■□□□□ 0.98
ATP2C1-218ENST00000510168 OS9Q13438 667 aaPredicted RBP21.18■□□□□ 0.98
ATP2C1-218ENST00000510168 MCCP23508 829 aa21.18■□□□□ 0.98
ATP2C1-218ENST00000510168 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
ATP2C1-218ENST00000510168 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
ATP2C1-218ENST00000510168 GZF1Q9H116 711 aaPredicted RBP21.16■□□□□ 0.98
ATP2C1-218ENST00000510168 TAOK2Q9UL54 1235 aa21.16■□□□□ 0.98
ATP2C1-218ENST00000510168 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
ATP2C1-218ENST00000510168 SLKQ9H2G2 1235 aaPredicted RBP21.15■□□□□ 0.98
ATP2C1-218ENST00000510168 IPO9Q96P70 1041 aaKnown RBP21.15■□□□□ 0.98
ATP2C1-218ENST00000510168 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.98
ATP2C1-218ENST00000510168 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
ATP2C1-218ENST00000510168 TULP1O00294 542 aaPredicted RBP21.12■□□□□ 0.97
ATP2C1-218ENST00000510168 GOLGA6L3A6NEY3 463 aa21.11■□□□□ 0.97
ATP2C1-218ENST00000510168 TMF1P82094 1093 aa21.11■□□□□ 0.97
ATP2C1-218ENST00000510168 ARID3AQ99856 593 aa21.1■□□□□ 0.97
ATP2C1-218ENST00000510168 PODXL2Q9NZ53 605 aa21.1■□□□□ 0.97
ATP2C1-218ENST00000510168 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
ATP2C1-218ENST00000510168 RCAN3Q9UKA8 241 aa21.09■□□□□ 0.97
ATP2C1-218ENST00000510168 TNNT3P45378 269 aaPredicted RBP21.07■□□□□ 0.96
ATP2C1-218ENST00000510168 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms