RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TSPOAP1O95153 1857 aa20.49■□□□□ 0.87
SNF8-207ENST00000509995 ADGRL1O94910 1474 aa20.45■□□□□ 0.86
SNF8-207ENST00000509995 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
SNF8-207ENST00000509995 ADCY10Q96PN6 1610 aa20.4■□□□□ 0.86
SNF8-207ENST00000509995 NPM1P06748 294 aaKnown RBP eCLIP20.39■□□□□ 0.85
SNF8-207ENST00000509995 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
SNF8-207ENST00000509995 FBXO41Q8TF61 875 aa20.32■□□□□ 0.84
SNF8-207ENST00000509995 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
SNF8-207ENST00000509995 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
SNF8-207ENST00000509995 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
SNF8-207ENST00000509995 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
SNF8-207ENST00000509995 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
SNF8-207ENST00000509995 GLI2P10070 1586 aa20.15■□□□□ 0.82
SNF8-207ENST00000509995 COL17A1Q9UMD9 1497 aaPredicted RBP20.12■□□□□ 0.81
SNF8-207ENST00000509995 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
SNF8-207ENST00000509995 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
SNF8-207ENST00000509995 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
SNF8-207ENST00000509995 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
SNF8-207ENST00000509995 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
SNF8-207ENST00000509995 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
SNF8-207ENST00000509995 MAP3K4Q9Y6R4 1608 aa20.03■□□□□ 0.8
SNF8-207ENST00000509995 CUL7Q14999 1698 aa20■□□□□ 0.79
SNF8-207ENST00000509995 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
SNF8-207ENST00000509995 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
SNF8-207ENST00000509995 PTPRGP23470 1445 aa19.97■□□□□ 0.79
SNF8-207ENST00000509995 EPRSP07814 1512 aaKnown RBP19.94■□□□□ 0.78
SNF8-207ENST00000509995 SOCS7O14512 581 aa19.9■□□□□ 0.78
SNF8-207ENST00000509995 UHRF1BP1LA0JNW5 1464 aa19.89■□□□□ 0.77
SNF8-207ENST00000509995 KIF21BO75037 1637 aa19.87■□□□□ 0.77
SNF8-207ENST00000509995 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
SNF8-207ENST00000509995 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
SNF8-207ENST00000509995 ILDR2Q71H61 639 aa19.84■□□□□ 0.77
SNF8-207ENST00000509995 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
SNF8-207ENST00000509995 CARMIL2Q6F5E8 1435 aa19.82■□□□□ 0.76
SNF8-207ENST00000509995 ZCCHC11Q5TAX3 1644 aaKnown RBP19.81■□□□□ 0.76
SNF8-207ENST00000509995 UACAQ9BZF9 1416 aa19.81■□□□□ 0.76
SNF8-207ENST00000509995 PTPRMP28827 1452 aa19.79■□□□□ 0.76
SNF8-207ENST00000509995 PCF11O94913 1555 aaKnown RBP19.78■□□□□ 0.76
SNF8-207ENST00000509995 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
SNF8-207ENST00000509995 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
SNF8-207ENST00000509995 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
SNF8-207ENST00000509995 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
SNF8-207ENST00000509995 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
SNF8-207ENST00000509995 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
SNF8-207ENST00000509995 IGF1RP08069 1367 aa19.7■□□□□ 0.74
SNF8-207ENST00000509995 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
SNF8-207ENST00000509995 CD109Q6YHK3 1445 aa19.67■□□□□ 0.74
SNF8-207ENST00000509995 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
SNF8-207ENST00000509995 SPATA31D1Q6ZQQ2 1576 aa19.63■□□□□ 0.73
SNF8-207ENST00000509995 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
SNF8-207ENST00000509995 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
SNF8-207ENST00000509995 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
SNF8-207ENST00000509995 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
SNF8-207ENST00000509995 KIAA0556O60303 1618 aa19.56■□□□□ 0.72
SNF8-207ENST00000509995 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
SNF8-207ENST00000509995 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
SNF8-207ENST00000509995 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
SNF8-207ENST00000509995 HSPA2P54652 639 aa19.52■□□□□ 0.72
SNF8-207ENST00000509995 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
SNF8-207ENST00000509995 FRMPD1Q5SYB0 1578 aa19.44■□□□□ 0.7
SNF8-207ENST00000509995 ABCA8O94911 1581 aa19.43■□□□□ 0.7
SNF8-207ENST00000509995 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
SNF8-207ENST00000509995 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
SNF8-207ENST00000509995 ARHGEF40Q8TER5 1519 aa19.4■□□□□ 0.7
SNF8-207ENST00000509995 RAPGEF3O95398 923 aa19.39■□□□□ 0.69
SNF8-207ENST00000509995 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
SNF8-207ENST00000509995 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
SNF8-207ENST00000509995 NEO1Q92859 1461 aa19.35■□□□□ 0.69
SNF8-207ENST00000509995 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
SNF8-207ENST00000509995 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
SNF8-207ENST00000509995 FER1L4A9Z1Z3 1794 aa19.29■□□□□ 0.68
SNF8-207ENST00000509995 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
SNF8-207ENST00000509995 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
SNF8-207ENST00000509995 TTC37Q6PGP7 1564 aa19.29■□□□□ 0.68
SNF8-207ENST00000509995 FANCAO15360 1455 aa19.28■□□□□ 0.68
SNF8-207ENST00000509995 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
SNF8-207ENST00000509995 RICTORQ6R327 1708 aa19.28■□□□□ 0.68
SNF8-207ENST00000509995 SIGLEC1Q9BZZ2 1709 aa19.28■□□□□ 0.68
SNF8-207ENST00000509995 POGZQ7Z3K3 1410 aa19.27■□□□□ 0.68
SNF8-207ENST00000509995 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
SNF8-207ENST00000509995 YEATS2Q9ULM3 1422 aa19.26■□□□□ 0.67
SNF8-207ENST00000509995 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
SNF8-207ENST00000509995 ATP10BO94823 1461 aa19.22■□□□□ 0.67
SNF8-207ENST00000509995 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
SNF8-207ENST00000509995 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
SNF8-207ENST00000509995 ZMYM4Q5VZL5 1548 aa19.19■□□□□ 0.66
SNF8-207ENST00000509995 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
SNF8-207ENST00000509995 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
SNF8-207ENST00000509995 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
SNF8-207ENST00000509995 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
SNF8-207ENST00000509995 EFCAB5A4FU69 1503 aa19.16■□□□□ 0.66
SNF8-207ENST00000509995 ZFYVE16Q7Z3T8 1539 aa19.16■□□□□ 0.66
SNF8-207ENST00000509995 PTPRTO14522 1441 aa19.13■□□□□ 0.65
SNF8-207ENST00000509995 ARHGEF12Q9NZN5 1544 aa19.13■□□□□ 0.65
SNF8-207ENST00000509995 CFAP74Q9C0B2 1584 aa19.12■□□□□ 0.65
SNF8-207ENST00000509995 MLECQ14165 292 aa19.12■□□□□ 0.65
SNF8-207ENST00000509995 UHRF1BP1Q6BDS2 1440 aa19.1■□□□□ 0.65
SNF8-207ENST00000509995 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
SNF8-207ENST00000509995 SETD1BQ9UPS6 1966 aaKnown RBP19.09■□□□□ 0.65
SNF8-207ENST00000509995 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms