RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSBP2-213ENST00000509743 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
SSBP2-213ENST00000509743 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
SSBP2-213ENST00000509743 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
SSBP2-213ENST00000509743 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
SSBP2-213ENST00000509743 PBRM1Q86U86 1689 aa12□□□□□ -0.49
SSBP2-213ENST00000509743 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
SSBP2-213ENST00000509743 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
SSBP2-213ENST00000509743 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
SSBP2-213ENST00000509743 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
SSBP2-213ENST00000509743 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
SSBP2-213ENST00000509743 FHOD3Q2V2M9 1422 aa11.96□□□□□ -0.49
SSBP2-213ENST00000509743 CASKIN1Q8WXD9 1431 aa11.96□□□□□ -0.49
SSBP2-213ENST00000509743 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.5
SSBP2-213ENST00000509743 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
SSBP2-213ENST00000509743 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
SSBP2-213ENST00000509743 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
SSBP2-213ENST00000509743 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
SSBP2-213ENST00000509743 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
SSBP2-213ENST00000509743 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
SSBP2-213ENST00000509743 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
SSBP2-213ENST00000509743 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
SSBP2-213ENST00000509743 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
SSBP2-213ENST00000509743 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
SSBP2-213ENST00000509743 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
SSBP2-213ENST00000509743 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
SSBP2-213ENST00000509743 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
SSBP2-213ENST00000509743 CFAP43Q8NDM7 1665 aa11.88□□□□□ -0.51
SSBP2-213ENST00000509743 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
SSBP2-213ENST00000509743 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
SSBP2-213ENST00000509743 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
SSBP2-213ENST00000509743 CCDC18Q5T9S5 1454 aa11.84□□□□□ -0.51
SSBP2-213ENST00000509743 NUP160Q12769 1436 aa11.84□□□□□ -0.51
SSBP2-213ENST00000509743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
SSBP2-213ENST00000509743 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
SSBP2-213ENST00000509743 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
SSBP2-213ENST00000509743 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
SSBP2-213ENST00000509743 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
SSBP2-213ENST00000509743 KIAA0556O60303 1618 aa11.79□□□□□ -0.52
SSBP2-213ENST00000509743 DISP1Q96F81 1524 aa11.79□□□□□ -0.52
SSBP2-213ENST00000509743 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
SSBP2-213ENST00000509743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
SSBP2-213ENST00000509743 EHBP1L1Q8N3D4 1523 aa11.78□□□□□ -0.52
SSBP2-213ENST00000509743 PHLDB1Q86UU1 1377 aa11.78□□□□□ -0.52
SSBP2-213ENST00000509743 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
SSBP2-213ENST00000509743 FBLN2P98095 1184 aa11.76□□□□□ -0.53
SSBP2-213ENST00000509743 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
SSBP2-213ENST00000509743 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
SSBP2-213ENST00000509743 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
SSBP2-213ENST00000509743 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
SSBP2-213ENST00000509743 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
SSBP2-213ENST00000509743 MYOM3Q5VTT5 1437 aa11.71□□□□□ -0.53
SSBP2-213ENST00000509743 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
SSBP2-213ENST00000509743 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
SSBP2-213ENST00000509743 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
SSBP2-213ENST00000509743 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
SSBP2-213ENST00000509743 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
SSBP2-213ENST00000509743 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-213ENST00000509743 CDK13Q14004 1512 aaKnown RBP11.67□□□□□ -0.54
SSBP2-213ENST00000509743 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
SSBP2-213ENST00000509743 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
SSBP2-213ENST00000509743 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
SSBP2-213ENST00000509743 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
SSBP2-213ENST00000509743 DHX57Q6P158 1386 aaKnown RBP11.65□□□□□ -0.55
SSBP2-213ENST00000509743 TCOF1Q13428 1488 aaKnown RBP11.64□□□□□ -0.55
SSBP2-213ENST00000509743 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
SSBP2-213ENST00000509743 ITGAEP38570 1179 aa11.64□□□□□ -0.55
SSBP2-213ENST00000509743 RAB3GAP2Q9H2M9 1393 aa11.63□□□□□ -0.55
SSBP2-213ENST00000509743 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
SSBP2-213ENST00000509743 ABCA8O94911 1581 aa11.62□□□□□ -0.55
SSBP2-213ENST00000509743 TROQ12816 1431 aaPredicted RBP11.62□□□□□ -0.55
SSBP2-213ENST00000509743 PTPRGP23470 1445 aa11.6□□□□□ -0.55
SSBP2-213ENST00000509743 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
SSBP2-213ENST00000509743 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
SSBP2-213ENST00000509743 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
SSBP2-213ENST00000509743 CHD1O14646 1710 aa11.58□□□□□ -0.56
SSBP2-213ENST00000509743 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
SSBP2-213ENST00000509743 CLASP1Q7Z460 1538 aa11.57□□□□□ -0.56
SSBP2-213ENST00000509743 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
SSBP2-213ENST00000509743 UACAQ9BZF9 1416 aa11.55□□□□□ -0.56
SSBP2-213ENST00000509743 ATP10BO94823 1461 aa11.55□□□□□ -0.56
SSBP2-213ENST00000509743 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
SSBP2-213ENST00000509743 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
SSBP2-213ENST00000509743 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
SSBP2-213ENST00000509743 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
SSBP2-213ENST00000509743 NAIPQ13075 1403 aa11.52□□□□□ -0.56
SSBP2-213ENST00000509743 KIF14Q15058 1648 aa11.51□□□□□ -0.57
SSBP2-213ENST00000509743 ROCK1Q13464 1354 aa11.51□□□□□ -0.57
SSBP2-213ENST00000509743 MAPKBP1O60336 1514 aa11.5□□□□□ -0.57
SSBP2-213ENST00000509743 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
SSBP2-213ENST00000509743 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
SSBP2-213ENST00000509743 DAPK1P53355 1430 aa11.5□□□□□ -0.57
SSBP2-213ENST00000509743 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
SSBP2-213ENST00000509743 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
SSBP2-213ENST00000509743 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
SSBP2-213ENST00000509743 ABCC10Q5T3U5 1492 aa11.49□□□□□ -0.57
SSBP2-213ENST00000509743 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
SSBP2-213ENST00000509743 CAMSAP2Q08AD1 1489 aa11.47□□□□□ -0.57
SSBP2-213ENST00000509743 ABCC5O15440 1437 aa11.47□□□□□ -0.57
SSBP2-213ENST00000509743 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms