RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
SIL1-212ENST00000509400 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
SIL1-212ENST00000509400 ABCC10Q5T3U5 1492 aa19.05■□□□□ 0.64
SIL1-212ENST00000509400 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
SIL1-212ENST00000509400 ADCY10Q96PN6 1610 aa19.03■□□□□ 0.64
SIL1-212ENST00000509400 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
SIL1-212ENST00000509400 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
SIL1-212ENST00000509400 DIP2BQ9P265 1576 aa19.01■□□□□ 0.63
SIL1-212ENST00000509400 IGF1RP08069 1367 aa18.99■□□□□ 0.63
SIL1-212ENST00000509400 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
SIL1-212ENST00000509400 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
SIL1-212ENST00000509400 KDM4FA0A1W2PPD8 638 aa18.93■□□□□ 0.62
SIL1-212ENST00000509400 KIAA0586Q9BVV6 1533 aa18.92■□□□□ 0.62
SIL1-212ENST00000509400 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
SIL1-212ENST00000509400 KDM6BO15054 1643 aa18.89■□□□□ 0.62
SIL1-212ENST00000509400 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
SIL1-212ENST00000509400 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
SIL1-212ENST00000509400 CUL7Q14999 1698 aa18.83■□□□□ 0.61
SIL1-212ENST00000509400 PTPRGP23470 1445 aa18.81■□□□□ 0.6
SIL1-212ENST00000509400 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
SIL1-212ENST00000509400 EEA1Q15075 1411 aa18.78■□□□□ 0.6
SIL1-212ENST00000509400 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
SIL1-212ENST00000509400 ABCC2Q92887 1545 aa18.75■□□□□ 0.59
SIL1-212ENST00000509400 ASXL2Q76L83 1435 aa18.74■□□□□ 0.59
SIL1-212ENST00000509400 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
SIL1-212ENST00000509400 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
SIL1-212ENST00000509400 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
SIL1-212ENST00000509400 GLI2P10070 1586 aa18.71■□□□□ 0.59
SIL1-212ENST00000509400 RAPGEF2Q9Y4G8 1499 aa18.71■□□□□ 0.59
SIL1-212ENST00000509400 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
SIL1-212ENST00000509400 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
SIL1-212ENST00000509400 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
SIL1-212ENST00000509400 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
SIL1-212ENST00000509400 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
SIL1-212ENST00000509400 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
SIL1-212ENST00000509400 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
SIL1-212ENST00000509400 ILDR1Q86SU0 546 aaPredicted RBP18.65■□□□□ 0.58
SIL1-212ENST00000509400 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
SIL1-212ENST00000509400 EPRSP07814 1512 aaKnown RBP18.63■□□□□ 0.57
SIL1-212ENST00000509400 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
SIL1-212ENST00000509400 MAP3K4Q9Y6R4 1608 aa18.62■□□□□ 0.57
SIL1-212ENST00000509400 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
SIL1-212ENST00000509400 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.56
SIL1-212ENST00000509400 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
SIL1-212ENST00000509400 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
SIL1-212ENST00000509400 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
SIL1-212ENST00000509400 TEX14Q8IWB6 1497 aa18.52■□□□□ 0.55
SIL1-212ENST00000509400 KIF21BO75037 1637 aa18.51■□□□□ 0.55
SIL1-212ENST00000509400 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
SIL1-212ENST00000509400 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
SIL1-212ENST00000509400 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
SIL1-212ENST00000509400 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
SIL1-212ENST00000509400 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
SIL1-212ENST00000509400 ABCA8O94911 1581 aa18.42■□□□□ 0.54
SIL1-212ENST00000509400 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
SIL1-212ENST00000509400 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
SIL1-212ENST00000509400 MAGI3Q5TCQ9 1506 aa18.4■□□□□ 0.54
SIL1-212ENST00000509400 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
SIL1-212ENST00000509400 CFAP43Q8NDM7 1665 aa18.39■□□□□ 0.53
SIL1-212ENST00000509400 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
SIL1-212ENST00000509400 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
SIL1-212ENST00000509400 ATP10BO94823 1461 aa18.26■□□□□ 0.51
SIL1-212ENST00000509400 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
SIL1-212ENST00000509400 ARHGAP35Q9NRY4 1499 aa18.25■□□□□ 0.51
SIL1-212ENST00000509400 CLIP1P30622 1438 aa18.23■□□□□ 0.51
SIL1-212ENST00000509400 ADAMTSL3P82987 1691 aa18.22■□□□□ 0.51
SIL1-212ENST00000509400 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
SIL1-212ENST00000509400 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
SIL1-212ENST00000509400 SAMD9Q5K651 1589 aa18.21■□□□□ 0.51
SIL1-212ENST00000509400 RAPGEF3O95398 923 aa18.2■□□□□ 0.5
SIL1-212ENST00000509400 PTPRMP28827 1452 aa18.2■□□□□ 0.5
SIL1-212ENST00000509400 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
SIL1-212ENST00000509400 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
SIL1-212ENST00000509400 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
SIL1-212ENST00000509400 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
SIL1-212ENST00000509400 BCORL1Q5H9F3 1711 aa18.13■□□□□ 0.49
SIL1-212ENST00000509400 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
SIL1-212ENST00000509400 NEO1Q92859 1461 aa18.12■□□□□ 0.49
SIL1-212ENST00000509400 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
SIL1-212ENST00000509400 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
SIL1-212ENST00000509400 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
SIL1-212ENST00000509400 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
SIL1-212ENST00000509400 PCF11O94913 1555 aaKnown RBP18.07■□□□□ 0.48
SIL1-212ENST00000509400 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
SIL1-212ENST00000509400 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
SIL1-212ENST00000509400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
SIL1-212ENST00000509400 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
SIL1-212ENST00000509400 ARHGEF40Q8TER5 1519 aa18.04■□□□□ 0.48
SIL1-212ENST00000509400 RICTORQ6R327 1708 aa18.04■□□□□ 0.48
SIL1-212ENST00000509400 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
SIL1-212ENST00000509400 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
SIL1-212ENST00000509400 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
SIL1-212ENST00000509400 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
SIL1-212ENST00000509400 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
SIL1-212ENST00000509400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
SIL1-212ENST00000509400 HSPA2P54652 639 aa17.98■□□□□ 0.47
SIL1-212ENST00000509400 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
SIL1-212ENST00000509400 FANCAO15360 1455 aa17.97■□□□□ 0.47
SIL1-212ENST00000509400 YEATS2Q9ULM3 1422 aa17.97■□□□□ 0.47
SIL1-212ENST00000509400 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms