RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
CCSER1-208ENST00000509109 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCSER1-208ENST00000509109 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
CCSER1-208ENST00000509109 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
CCSER1-208ENST00000509109 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
CCSER1-208ENST00000509109 GABBR2O75899 941 aa14.47□□□□□ -0.09
CCSER1-208ENST00000509109 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
CCSER1-208ENST00000509109 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
CCSER1-208ENST00000509109 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
CCSER1-208ENST00000509109 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
CCSER1-208ENST00000509109 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
CCSER1-208ENST00000509109 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
CCSER1-208ENST00000509109 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
CCSER1-208ENST00000509109 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
CCSER1-208ENST00000509109 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
CCSER1-208ENST00000509109 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
CCSER1-208ENST00000509109 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
CCSER1-208ENST00000509109 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
CCSER1-208ENST00000509109 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
CCSER1-208ENST00000509109 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
CCSER1-208ENST00000509109 NUBP1P53384 320 aa14.32□□□□□ -0.12
CCSER1-208ENST00000509109 GALR2O43603 387 aaPredicted RBP14.28□□□□□ -0.12
CCSER1-208ENST00000509109 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
CCSER1-208ENST00000509109 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
CCSER1-208ENST00000509109 CLCN6P51797 869 aa14.25□□□□□ -0.13
CCSER1-208ENST00000509109 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-208ENST00000509109 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
CCSER1-208ENST00000509109 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
CCSER1-208ENST00000509109 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
CCSER1-208ENST00000509109 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
CCSER1-208ENST00000509109 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
CCSER1-208ENST00000509109 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
CCSER1-208ENST00000509109 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
CCSER1-208ENST00000509109 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
CCSER1-208ENST00000509109 CUX2O14529 1486 aa14.16□□□□□ -0.14
CCSER1-208ENST00000509109 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
CCSER1-208ENST00000509109 MAP3K13O43283 966 aa14.14□□□□□ -0.15
CCSER1-208ENST00000509109 LHX8Q68G74 356 aa14.13□□□□□ -0.15
CCSER1-208ENST00000509109 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
CCSER1-208ENST00000509109 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
CCSER1-208ENST00000509109 PYGBP11216 843 aa14.07□□□□□ -0.16
CCSER1-208ENST00000509109 NESP48681 1621 aa14.06□□□□□ -0.16
CCSER1-208ENST00000509109 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
CCSER1-208ENST00000509109 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
CCSER1-208ENST00000509109 GSE1Q14687 1217 aa14.03□□□□□ -0.16
CCSER1-208ENST00000509109 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
CCSER1-208ENST00000509109 WIZO95785 1651 aa14.01□□□□□ -0.17
CCSER1-208ENST00000509109 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
CCSER1-208ENST00000509109 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
CCSER1-208ENST00000509109 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
CCSER1-208ENST00000509109 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
CCSER1-208ENST00000509109 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.17
CCSER1-208ENST00000509109 ATMINO43313 823 aaPredicted RBP13.95□□□□□ -0.18
CCSER1-208ENST00000509109 SGIP1Q9BQI5 828 aa13.95□□□□□ -0.18
CCSER1-208ENST00000509109 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
CCSER1-208ENST00000509109 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
CCSER1-208ENST00000509109 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
CCSER1-208ENST00000509109 ATN1P54259 1190 aaPredicted RBP13.92□□□□□ -0.18
CCSER1-208ENST00000509109 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
CCSER1-208ENST00000509109 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
CCSER1-208ENST00000509109 TIE1P35590 1138 aa13.89□□□□□ -0.19
CCSER1-208ENST00000509109 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
CCSER1-208ENST00000509109 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
CCSER1-208ENST00000509109 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
CCSER1-208ENST00000509109 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
CCSER1-208ENST00000509109 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-208ENST00000509109 WDR62O43379 1518 aa13.84□□□□□ -0.19
CCSER1-208ENST00000509109 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
CCSER1-208ENST00000509109 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
CCSER1-208ENST00000509109 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
CCSER1-208ENST00000509109 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
CCSER1-208ENST00000509109 CFTRP13569 1480 aa13.8□□□□□ -0.2
CCSER1-208ENST00000509109 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
CCSER1-208ENST00000509109 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
CCSER1-208ENST00000509109 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
CCSER1-208ENST00000509109 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
CCSER1-208ENST00000509109 C7P10643 843 aa13.76□□□□□ -0.21
CCSER1-208ENST00000509109 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
CCSER1-208ENST00000509109 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
CCSER1-208ENST00000509109 PSEN1P49768 467 aa13.7□□□□□ -0.22
CCSER1-208ENST00000509109 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
CCSER1-208ENST00000509109 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
CCSER1-208ENST00000509109 SEC24BO95487 1268 aa13.66□□□□□ -0.22
CCSER1-208ENST00000509109 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
CCSER1-208ENST00000509109 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
CCSER1-208ENST00000509109 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
CCSER1-208ENST00000509109 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
CCSER1-208ENST00000509109 ECM2O94769 699 aaPredicted RBP13.62□□□□□ -0.23
CCSER1-208ENST00000509109 IER5LQ5T953 404 aa13.62□□□□□ -0.23
CCSER1-208ENST00000509109 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
CCSER1-208ENST00000509109 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
CCSER1-208ENST00000509109 PKD2Q13563 968 aa13.6□□□□□ -0.23
CCSER1-208ENST00000509109 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
CCSER1-208ENST00000509109 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
CCSER1-208ENST00000509109 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
CCSER1-208ENST00000509109 PLCG2P16885 1265 aa13.56□□□□□ -0.24
CCSER1-208ENST00000509109 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
CCSER1-208ENST00000509109 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
CCSER1-208ENST00000509109 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
CCSER1-208ENST00000509109 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms