RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CARMIL1Q5VZK9 1371 aa31.81■■■□□ 2.68
UBE3D-207ENST00000509102 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
UBE3D-207ENST00000509102 ERCC6L2Q5T890 1561 aa31.8■■■□□ 2.68
UBE3D-207ENST00000509102 PRG4Q92954 1404 aaPredicted RBP31.78■■■□□ 2.68
UBE3D-207ENST00000509102 TRHP20396 242 aaPredicted RBP31.78■■■□□ 2.68
UBE3D-207ENST00000509102 KIAA0586Q9BVV6 1533 aa31.74■■■□□ 2.67
UBE3D-207ENST00000509102 RAPGEF2Q9Y4G8 1499 aa31.59■■■□□ 2.65
UBE3D-207ENST00000509102 IQGAP2Q13576 1575 aa31.51■■■□□ 2.63
UBE3D-207ENST00000509102 CARMIL2Q6F5E8 1435 aa31.49■■■□□ 2.63
UBE3D-207ENST00000509102 NPM1P06748 294 aaKnown RBP eCLIP31.43■■■□□ 2.62
UBE3D-207ENST00000509102 PTPRGP23470 1445 aa31.38■■■□□ 2.61
UBE3D-207ENST00000509102 TNIKQ9UKE5 1360 aa31.36■■■□□ 2.61
UBE3D-207ENST00000509102 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
UBE3D-207ENST00000509102 TTBK1Q5TCY1 1321 aaPredicted RBP31.32■■■□□ 2.6
UBE3D-207ENST00000509102 UGGT2Q9NYU1 1516 aa31.29■■■□□ 2.6
UBE3D-207ENST00000509102 ADCY10Q96PN6 1610 aa31.29■■■□□ 2.6
UBE3D-207ENST00000509102 EEA1Q15075 1411 aa31.27■■■□□ 2.6
UBE3D-207ENST00000509102 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
UBE3D-207ENST00000509102 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
UBE3D-207ENST00000509102 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
UBE3D-207ENST00000509102 MAPKBP1O60336 1514 aa31.22■■■□□ 2.59
UBE3D-207ENST00000509102 KIAA0556O60303 1618 aa31.19■■■□□ 2.58
UBE3D-207ENST00000509102 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
UBE3D-207ENST00000509102 UACAQ9BZF9 1416 aa31.14■■■□□ 2.58
UBE3D-207ENST00000509102 ABCC10Q5T3U5 1492 aa31.13■■■□□ 2.57
UBE3D-207ENST00000509102 ABCC2Q92887 1545 aa31.12■■■□□ 2.57
UBE3D-207ENST00000509102 UHRF1BP1LA0JNW5 1464 aa31.11■■■□□ 2.57
UBE3D-207ENST00000509102 FAM69CQ0P6D2 419 aa31.11■■■□□ 2.57
UBE3D-207ENST00000509102 KIF13AQ9H1H9 1805 aa31.1■■■□□ 2.57
UBE3D-207ENST00000509102 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
UBE3D-207ENST00000509102 DIP2BQ9P265 1576 aa31.04■■■□□ 2.56
UBE3D-207ENST00000509102 PLB1Q6P1J6 1458 aa30.98■■■□□ 2.55
UBE3D-207ENST00000509102 ASXL2Q76L83 1435 aa30.96■■■□□ 2.55
UBE3D-207ENST00000509102 KDM5BQ9UGL1 1544 aa30.95■■■□□ 2.55
UBE3D-207ENST00000509102 KIF21BO75037 1637 aa30.91■■■□□ 2.54
UBE3D-207ENST00000509102 ZCCHC11Q5TAX3 1644 aaKnown RBP30.88■■■□□ 2.53
UBE3D-207ENST00000509102 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
UBE3D-207ENST00000509102 ABCA8O94911 1581 aa30.84■■■□□ 2.53
UBE3D-207ENST00000509102 SAMD9Q5K651 1589 aa30.83■■■□□ 2.53
UBE3D-207ENST00000509102 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
UBE3D-207ENST00000509102 GLI2P10070 1586 aa30.8■■■□□ 2.52
UBE3D-207ENST00000509102 TSPOAP1O95153 1857 aa30.78■■■□□ 2.52
UBE3D-207ENST00000509102 EPRSP07814 1512 aaKnown RBP30.76■■■□□ 2.51
UBE3D-207ENST00000509102 WDR7Q9Y4E6 1490 aa30.76■■■□□ 2.51
UBE3D-207ENST00000509102 UBTFP17480 764 aaKnown RBP30.75■■■□□ 2.51
UBE3D-207ENST00000509102 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.51
UBE3D-207ENST00000509102 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
UBE3D-207ENST00000509102 KDM6BO15054 1643 aa30.69■■■□□ 2.5
UBE3D-207ENST00000509102 FHOD3Q2V2M9 1422 aa30.65■■■□□ 2.5
UBE3D-207ENST00000509102 RAPGEF6Q8TEU7 1601 aa30.65■■■□□ 2.5
UBE3D-207ENST00000509102 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
UBE3D-207ENST00000509102 MAP3K4Q9Y6R4 1608 aa30.63■■■□□ 2.49
UBE3D-207ENST00000509102 ARID3CA6NKF2 412 aa30.63■■■□□ 2.49
UBE3D-207ENST00000509102 KCNH8Q96L42 1107 aa30.62■■■□□ 2.49
UBE3D-207ENST00000509102 ATP10BO94823 1461 aa30.6■■■□□ 2.49
UBE3D-207ENST00000509102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.59■■■□□ 2.49
UBE3D-207ENST00000509102 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
UBE3D-207ENST00000509102 PPRC1Q5VV67 1664 aaKnown RBP30.58■■■□□ 2.49
UBE3D-207ENST00000509102 CD109Q6YHK3 1445 aa30.53■■■□□ 2.48
UBE3D-207ENST00000509102 CFAP43Q8NDM7 1665 aa30.52■■■□□ 2.48
UBE3D-207ENST00000509102 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
UBE3D-207ENST00000509102 MAGI3Q5TCQ9 1506 aa30.46■■■□□ 2.47
UBE3D-207ENST00000509102 FMN1Q68DA7 1419 aa30.45■■■□□ 2.46
UBE3D-207ENST00000509102 PLEKHD1A6NEE1 506 aa30.41■■■□□ 2.46
UBE3D-207ENST00000509102 ARHGAP35Q9NRY4 1499 aa30.41■■■□□ 2.46
UBE3D-207ENST00000509102 ATP1B4Q9UN42 357 aaPredicted RBP30.36■■■□□ 2.45
UBE3D-207ENST00000509102 ABCA9Q8IUA7 1624 aa30.36■■■□□ 2.45
UBE3D-207ENST00000509102 COL17A1Q9UMD9 1497 aaPredicted RBP30.33■■■□□ 2.45
UBE3D-207ENST00000509102 HECW1Q76N89 1606 aa30.32■■■□□ 2.44
UBE3D-207ENST00000509102 PHLDB1Q86UU1 1377 aa30.28■■■□□ 2.44
UBE3D-207ENST00000509102 CDK11AQ9UQ88 783 aaPredicted RBP30.25■■■□□ 2.43
UBE3D-207ENST00000509102 CDK13Q14004 1512 aaKnown RBP30.25■■■□□ 2.43
UBE3D-207ENST00000509102 NEO1Q92859 1461 aa30.2■■■□□ 2.43
UBE3D-207ENST00000509102 ARAP3Q8WWN8 1544 aa30.2■■■□□ 2.42
UBE3D-207ENST00000509102 CLIP1P30622 1438 aa30.17■■■□□ 2.42
UBE3D-207ENST00000509102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.14■■■□□ 2.42
UBE3D-207ENST00000509102 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
UBE3D-207ENST00000509102 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
UBE3D-207ENST00000509102 KDM4FA0A1W2PPD8 638 aa30.09■■■□□ 2.41
UBE3D-207ENST00000509102 CCDC18Q5T9S5 1454 aa30.09■■■□□ 2.41
UBE3D-207ENST00000509102 TTC37Q6PGP7 1564 aa30.09■■■□□ 2.41
UBE3D-207ENST00000509102 FANCAO15360 1455 aa30.08■■■□□ 2.41
UBE3D-207ENST00000509102 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
UBE3D-207ENST00000509102 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
UBE3D-207ENST00000509102 FYCO1Q9BQS8 1478 aa30.04■■■□□ 2.4
UBE3D-207ENST00000509102 KIF14Q15058 1648 aa30.04■■■□□ 2.4
UBE3D-207ENST00000509102 RAPGEF3O95398 923 aa30.03■■■□□ 2.4
UBE3D-207ENST00000509102 ADGRL1O94910 1474 aa30.03■■■□□ 2.4
UBE3D-207ENST00000509102 AKNAQ7Z591 1439 aa30.03■■■□□ 2.4
UBE3D-207ENST00000509102 PLCH2O75038 1416 aa30■■■□□ 2.39
UBE3D-207ENST00000509102 DENND4BO75064 1496 aaPredicted RBP29.99■■■□□ 2.39
UBE3D-207ENST00000509102 LRRIQ1Q96JM4 1722 aa29.98■■■□□ 2.39
UBE3D-207ENST00000509102 MYO5CQ9NQX4 1742 aa29.96■■■□□ 2.39
UBE3D-207ENST00000509102 EFCAB2Q5VUJ9 269 aa29.94■■■□□ 2.38
UBE3D-207ENST00000509102 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
UBE3D-207ENST00000509102 FRMPD1Q5SYB0 1578 aa29.91■■■□□ 2.38
UBE3D-207ENST00000509102 ARHGAP5Q13017 1502 aa29.87■■■□□ 2.37
UBE3D-207ENST00000509102 RICTORQ6R327 1708 aa29.87■■■□□ 2.37
UBE3D-207ENST00000509102 SCAPERQ9BY12 1400 aa29.86■■■□□ 2.37
UBE3D-207ENST00000509102 ZMYM4Q5VZL5 1548 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms