RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
CXCL1-202ENST00000509101 ADCY10Q96PN6 1610 aa28.5■■■□□ 2.15
CXCL1-202ENST00000509101 MAPKBP1O60336 1514 aa28.47■■■□□ 2.15
CXCL1-202ENST00000509101 ABCC10Q5T3U5 1492 aa28.46■■■□□ 2.15
CXCL1-202ENST00000509101 DIP2BQ9P265 1576 aa28.46■■■□□ 2.15
CXCL1-202ENST00000509101 CUL7Q14999 1698 aa28.43■■■□□ 2.14
CXCL1-202ENST00000509101 FAM69CQ0P6D2 419 aa28.4■■■□□ 2.14
CXCL1-202ENST00000509101 NPM1P06748 294 aaKnown RBP eCLIP28.39■■■□□ 2.14
CXCL1-202ENST00000509101 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
CXCL1-202ENST00000509101 TSPOAP1O95153 1857 aa28.34■■■□□ 2.13
CXCL1-202ENST00000509101 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
CXCL1-202ENST00000509101 KDM6BO15054 1643 aa28.32■■■□□ 2.12
CXCL1-202ENST00000509101 IGF1RP08069 1367 aa28.31■■■□□ 2.12
CXCL1-202ENST00000509101 PTPRGP23470 1445 aa28.16■■■□□ 2.1
CXCL1-202ENST00000509101 IQGAP2Q13576 1575 aa28.15■■■□□ 2.1
CXCL1-202ENST00000509101 TTBK1Q5TCY1 1321 aaPredicted RBP28.15■■■□□ 2.1
CXCL1-202ENST00000509101 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
CXCL1-202ENST00000509101 CARMIL2Q6F5E8 1435 aa28.11■■■□□ 2.09
CXCL1-202ENST00000509101 ABCC2Q92887 1545 aa28.11■■■□□ 2.09
CXCL1-202ENST00000509101 TNIKQ9UKE5 1360 aa28.1■■■□□ 2.09
CXCL1-202ENST00000509101 PPRC1Q5VV67 1664 aaKnown RBP28.09■■■□□ 2.09
CXCL1-202ENST00000509101 ASXL2Q76L83 1435 aa28.04■■■□□ 2.08
CXCL1-202ENST00000509101 KDM4FA0A1W2PPD8 638 aa28.04■■■□□ 2.08
CXCL1-202ENST00000509101 GLI2P10070 1586 aa28.03■■■□□ 2.08
CXCL1-202ENST00000509101 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
CXCL1-202ENST00000509101 UHRF1BP1LA0JNW5 1464 aa28■■■□□ 2.07
CXCL1-202ENST00000509101 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
CXCL1-202ENST00000509101 UACAQ9BZF9 1416 aa27.96■■■□□ 2.07
CXCL1-202ENST00000509101 ZCCHC11Q5TAX3 1644 aaKnown RBP27.93■■■□□ 2.06
CXCL1-202ENST00000509101 MAP3K4Q9Y6R4 1608 aa27.92■■■□□ 2.06
CXCL1-202ENST00000509101 KIAA0556O60303 1618 aa27.91■■■□□ 2.06
CXCL1-202ENST00000509101 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
CXCL1-202ENST00000509101 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
CXCL1-202ENST00000509101 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.05
CXCL1-202ENST00000509101 EPRSP07814 1512 aaKnown RBP27.88■■■□□ 2.05
CXCL1-202ENST00000509101 CTTNBP2Q8WZ74 1663 aa27.84■■■□□ 2.05
CXCL1-202ENST00000509101 ADGRL1O94910 1474 aa27.83■■■□□ 2.05
CXCL1-202ENST00000509101 COL17A1Q9UMD9 1497 aaPredicted RBP27.81■■■□□ 2.04
CXCL1-202ENST00000509101 TEX14Q8IWB6 1497 aa27.8■■■□□ 2.04
CXCL1-202ENST00000509101 WDR7Q9Y4E6 1490 aa27.73■■■□□ 2.03
CXCL1-202ENST00000509101 CFAP43Q8NDM7 1665 aa27.67■■■□□ 2.02
CXCL1-202ENST00000509101 ABCA8O94911 1581 aa27.65■■■□□ 2.02
CXCL1-202ENST00000509101 GOLGA3Q08378 1498 aa27.64■■■□□ 2.01
CXCL1-202ENST00000509101 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
CXCL1-202ENST00000509101 MAGI3Q5TCQ9 1506 aa27.57■■■□□ 2
CXCL1-202ENST00000509101 CD109Q6YHK3 1445 aa27.56■■■□□ 2
CXCL1-202ENST00000509101 ILDR1Q86SU0 546 aaPredicted RBP27.54■■■□□ 2
CXCL1-202ENST00000509101 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
CXCL1-202ENST00000509101 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
CXCL1-202ENST00000509101 KIF21BO75037 1637 aa27.5■■□□□ 1.99
CXCL1-202ENST00000509101 ARID3CA6NKF2 412 aa27.38■■□□□ 1.97
CXCL1-202ENST00000509101 ABCA9Q8IUA7 1624 aa27.37■■□□□ 1.97
CXCL1-202ENST00000509101 ARAP3Q8WWN8 1544 aa27.36■■□□□ 1.97
CXCL1-202ENST00000509101 ATP10BO94823 1461 aa27.35■■□□□ 1.97
CXCL1-202ENST00000509101 SAMD9Q5K651 1589 aa27.35■■□□□ 1.97
CXCL1-202ENST00000509101 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
CXCL1-202ENST00000509101 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
CXCL1-202ENST00000509101 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
CXCL1-202ENST00000509101 ADAMTSL3P82987 1691 aa27.24■■□□□ 1.95
CXCL1-202ENST00000509101 FRMPD1Q5SYB0 1578 aa27.22■■□□□ 1.95
CXCL1-202ENST00000509101 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.94
CXCL1-202ENST00000509101 NEO1Q92859 1461 aa27.19■■□□□ 1.94
CXCL1-202ENST00000509101 BCORL1Q5H9F3 1711 aa27.17■■□□□ 1.94
CXCL1-202ENST00000509101 PTPRMP28827 1452 aa27.16■■□□□ 1.94
CXCL1-202ENST00000509101 NUP153P49790 1475 aaKnown RBP27.16■■□□□ 1.94
CXCL1-202ENST00000509101 RAPGEF3O95398 923 aa27.15■■□□□ 1.94
CXCL1-202ENST00000509101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
CXCL1-202ENST00000509101 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
CXCL1-202ENST00000509101 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
CXCL1-202ENST00000509101 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CXCL1-202ENST00000509101 FHOD3Q2V2M9 1422 aa27.11■■□□□ 1.93
CXCL1-202ENST00000509101 ARHGEF40Q8TER5 1519 aa27.1■■□□□ 1.93
CXCL1-202ENST00000509101 RICTORQ6R327 1708 aa27.09■■□□□ 1.93
CXCL1-202ENST00000509101 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
CXCL1-202ENST00000509101 CFAP74Q9C0B2 1584 aa27.06■■□□□ 1.92
CXCL1-202ENST00000509101 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
CXCL1-202ENST00000509101 PCF11O94913 1555 aaKnown RBP27.02■■□□□ 1.92
CXCL1-202ENST00000509101 ARID4BQ4LE39 1312 aaPredicted RBP27.02■■□□□ 1.92
CXCL1-202ENST00000509101 TTC37Q6PGP7 1564 aa27.01■■□□□ 1.92
CXCL1-202ENST00000509101 EEA1Q15075 1411 aa27.01■■□□□ 1.91
CXCL1-202ENST00000509101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27■■□□□ 1.91
CXCL1-202ENST00000509101 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
CXCL1-202ENST00000509101 FANCAO15360 1455 aa26.98■■□□□ 1.91
CXCL1-202ENST00000509101 EFCAB5A4FU69 1503 aa26.97■■□□□ 1.91
CXCL1-202ENST00000509101 AKNAQ7Z591 1439 aa26.97■■□□□ 1.91
CXCL1-202ENST00000509101 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
CXCL1-202ENST00000509101 SIGLEC1Q9BZZ2 1709 aa26.95■■□□□ 1.9
CXCL1-202ENST00000509101 PLEKHD1A6NEE1 506 aa26.94■■□□□ 1.9
CXCL1-202ENST00000509101 FBXO41Q8TF61 875 aa26.94■■□□□ 1.9
CXCL1-202ENST00000509101 ZMYM4Q5VZL5 1548 aa26.94■■□□□ 1.9
CXCL1-202ENST00000509101 CDK13Q14004 1512 aaKnown RBP26.91■■□□□ 1.9
CXCL1-202ENST00000509101 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
CXCL1-202ENST00000509101 FER1L4A9Z1Z3 1794 aa26.86■■□□□ 1.89
CXCL1-202ENST00000509101 YEATS2Q9ULM3 1422 aa26.86■■□□□ 1.89
CXCL1-202ENST00000509101 HECW1Q76N89 1606 aa26.86■■□□□ 1.89
CXCL1-202ENST00000509101 POGZQ7Z3K3 1410 aa26.84■■□□□ 1.89
CXCL1-202ENST00000509101 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
CXCL1-202ENST00000509101 PLPPR3Q6T4P5 718 aa26.81■■□□□ 1.88
CXCL1-202ENST00000509101 MAGI2Q86UL8 1455 aa26.8■■□□□ 1.88
CXCL1-202ENST00000509101 PLCH2O75038 1416 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms