RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
UBE2D3-227ENST00000508818 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
UBE2D3-227ENST00000508818 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
UBE2D3-227ENST00000508818 IGF1RP08069 1367 aa17.37■□□□□ 0.37
UBE2D3-227ENST00000508818 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-227ENST00000508818 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
UBE2D3-227ENST00000508818 CUL7Q14999 1698 aa17.29■□□□□ 0.36
UBE2D3-227ENST00000508818 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
UBE2D3-227ENST00000508818 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBE2D3-227ENST00000508818 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
UBE2D3-227ENST00000508818 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
UBE2D3-227ENST00000508818 MSH5O43196 834 aa17.21■□□□□ 0.35
UBE2D3-227ENST00000508818 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
UBE2D3-227ENST00000508818 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
UBE2D3-227ENST00000508818 PTPRGP23470 1445 aa17.14■□□□□ 0.33
UBE2D3-227ENST00000508818 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
UBE2D3-227ENST00000508818 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
UBE2D3-227ENST00000508818 FAM69CQ0P6D2 419 aa17.12■□□□□ 0.33
UBE2D3-227ENST00000508818 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
UBE2D3-227ENST00000508818 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
UBE2D3-227ENST00000508818 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
UBE2D3-227ENST00000508818 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
UBE2D3-227ENST00000508818 ADRA2BP18089 450 aa17.06■□□□□ 0.32
UBE2D3-227ENST00000508818 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
UBE2D3-227ENST00000508818 ABCC10Q5T3U5 1492 aa17.04■□□□□ 0.32
UBE2D3-227ENST00000508818 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.31
UBE2D3-227ENST00000508818 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
UBE2D3-227ENST00000508818 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
UBE2D3-227ENST00000508818 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
UBE2D3-227ENST00000508818 UGGT2Q9NYU1 1516 aa16.97■□□□□ 0.31
UBE2D3-227ENST00000508818 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
UBE2D3-227ENST00000508818 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
UBE2D3-227ENST00000508818 UHRF1BP1LA0JNW5 1464 aa16.94■□□□□ 0.3
UBE2D3-227ENST00000508818 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
UBE2D3-227ENST00000508818 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
UBE2D3-227ENST00000508818 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
UBE2D3-227ENST00000508818 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
UBE2D3-227ENST00000508818 ASXL2Q76L83 1435 aa16.92■□□□□ 0.3
UBE2D3-227ENST00000508818 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
UBE2D3-227ENST00000508818 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
UBE2D3-227ENST00000508818 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
UBE2D3-227ENST00000508818 KDM5BQ9UGL1 1544 aa16.86■□□□□ 0.29
UBE2D3-227ENST00000508818 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
UBE2D3-227ENST00000508818 EEA1Q15075 1411 aa16.84■□□□□ 0.29
UBE2D3-227ENST00000508818 KDM6BO15054 1643 aa16.83■□□□□ 0.28
UBE2D3-227ENST00000508818 GLI2P10070 1586 aa16.81■□□□□ 0.28
UBE2D3-227ENST00000508818 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-227ENST00000508818 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
UBE2D3-227ENST00000508818 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
UBE2D3-227ENST00000508818 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
UBE2D3-227ENST00000508818 ARID3CA6NKF2 412 aa16.77■□□□□ 0.28
UBE2D3-227ENST00000508818 WDR7Q9Y4E6 1490 aa16.75■□□□□ 0.27
UBE2D3-227ENST00000508818 ABCA8O94911 1581 aa16.75■□□□□ 0.27
UBE2D3-227ENST00000508818 TEX14Q8IWB6 1497 aa16.74■□□□□ 0.27
UBE2D3-227ENST00000508818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-227ENST00000508818 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-227ENST00000508818 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
UBE2D3-227ENST00000508818 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
UBE2D3-227ENST00000508818 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
UBE2D3-227ENST00000508818 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
UBE2D3-227ENST00000508818 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-227ENST00000508818 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
UBE2D3-227ENST00000508818 ATP10BO94823 1461 aa16.66■□□□□ 0.26
UBE2D3-227ENST00000508818 KDM4FA0A1W2PPD8 638 aa16.63■□□□□ 0.25
UBE2D3-227ENST00000508818 KIF21BO75037 1637 aa16.63■□□□□ 0.25
UBE2D3-227ENST00000508818 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
UBE2D3-227ENST00000508818 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
UBE2D3-227ENST00000508818 RAPGEF6Q8TEU7 1601 aa16.62■□□□□ 0.25
UBE2D3-227ENST00000508818 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
UBE2D3-227ENST00000508818 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
UBE2D3-227ENST00000508818 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
UBE2D3-227ENST00000508818 EFCAB5A4FU69 1503 aa16.57■□□□□ 0.24
UBE2D3-227ENST00000508818 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
UBE2D3-227ENST00000508818 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-227ENST00000508818 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
UBE2D3-227ENST00000508818 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
UBE2D3-227ENST00000508818 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
UBE2D3-227ENST00000508818 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
UBE2D3-227ENST00000508818 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
UBE2D3-227ENST00000508818 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
UBE2D3-227ENST00000508818 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
UBE2D3-227ENST00000508818 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-227ENST00000508818 NEO1Q92859 1461 aa16.46■□□□□ 0.23
UBE2D3-227ENST00000508818 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
UBE2D3-227ENST00000508818 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-227ENST00000508818 ARID4BQ4LE39 1312 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-227ENST00000508818 HECW1Q76N89 1606 aa16.38■□□□□ 0.21
UBE2D3-227ENST00000508818 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
UBE2D3-227ENST00000508818 FANCAO15360 1455 aa16.38■□□□□ 0.21
UBE2D3-227ENST00000508818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.38■□□□□ 0.216e-33■□□□□ 10.7
UBE2D3-227ENST00000508818 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-227ENST00000508818 CFAP74Q9C0B2 1584 aa16.34■□□□□ 0.21
UBE2D3-227ENST00000508818 EFCAB2Q5VUJ9 269 aa16.34■□□□□ 0.21
UBE2D3-227ENST00000508818 CLIP1P30622 1438 aa16.33■□□□□ 0.2
UBE2D3-227ENST00000508818 TTC37Q6PGP7 1564 aa16.33■□□□□ 0.2
UBE2D3-227ENST00000508818 PLCH2O75038 1416 aa16.32■□□□□ 0.2
UBE2D3-227ENST00000508818 TROQ12816 1431 aaPredicted RBP16.3■□□□□ 0.2
UBE2D3-227ENST00000508818 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
UBE2D3-227ENST00000508818 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
UBE2D3-227ENST00000508818 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms