RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 NUP160Q12769 1436 aa10.71□□□□□ -0.69
KDM3B-205ENST00000508386 ABCA10Q8WWZ4 1543 aa10.71□□□□□ -0.69
KDM3B-205ENST00000508386 ABCA5Q8WWZ7 1642 aa10.71□□□□□ -0.69
KDM3B-205ENST00000508386 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
KDM3B-205ENST00000508386 GRIN2AQ12879 1464 aa10.7□□□□□ -0.7
KDM3B-205ENST00000508386 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
KDM3B-205ENST00000508386 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
KDM3B-205ENST00000508386 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
KDM3B-205ENST00000508386 KCNA4P22459 653 aa10.66□□□□□ -0.7
KDM3B-205ENST00000508386 ADAMTS12P58397 1594 aa10.65□□□□□ -0.71
KDM3B-205ENST00000508386 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
KDM3B-205ENST00000508386 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
KDM3B-205ENST00000508386 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
KDM3B-205ENST00000508386 PRG4Q92954 1404 aaPredicted RBP10.63□□□□□ -0.71
KDM3B-205ENST00000508386 ABCC10Q5T3U5 1492 aa10.62□□□□□ -0.71
KDM3B-205ENST00000508386 FHAD1B1AJZ9 1412 aa10.61□□□□□ -0.71
KDM3B-205ENST00000508386 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
KDM3B-205ENST00000508386 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
KDM3B-205ENST00000508386 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
KDM3B-205ENST00000508386 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
KDM3B-205ENST00000508386 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
KDM3B-205ENST00000508386 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
KDM3B-205ENST00000508386 KDM6BO15054 1643 aa10.51□□□□□ -0.73
KDM3B-205ENST00000508386 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
KDM3B-205ENST00000508386 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
KDM3B-205ENST00000508386 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
KDM3B-205ENST00000508386 TSPOAP1O95153 1857 aa10.5□□□□□ -0.73
KDM3B-205ENST00000508386 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
KDM3B-205ENST00000508386 HOXD11P31277 338 aaPredicted RBP10.48□□□□□ -0.73
KDM3B-205ENST00000508386 COL17A1Q9UMD9 1497 aaPredicted RBP10.48□□□□□ -0.73
KDM3B-205ENST00000508386 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
KDM3B-205ENST00000508386 ADGRL1O94910 1474 aa10.44□□□□□ -0.74
KDM3B-205ENST00000508386 DCAF8L1A6NGE4 600 aa10.44□□□□□ -0.74
KDM3B-205ENST00000508386 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
KDM3B-205ENST00000508386 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
KDM3B-205ENST00000508386 KIAA0586Q9BVV6 1533 aa10.43□□□□□ -0.74
KDM3B-205ENST00000508386 IGF1RP08069 1367 aa10.43□□□□□ -0.74
KDM3B-205ENST00000508386 PTPRGP23470 1445 aa10.41□□□□□ -0.74
KDM3B-205ENST00000508386 HECW2Q9P2P5 1572 aa10.4□□□□□ -0.74
KDM3B-205ENST00000508386 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
KDM3B-205ENST00000508386 ASXL2Q76L83 1435 aa10.4□□□□□ -0.75
KDM3B-205ENST00000508386 GLI2P10070 1586 aa10.38□□□□□ -0.75
KDM3B-205ENST00000508386 ABCC2Q92887 1545 aa10.38□□□□□ -0.75
KDM3B-205ENST00000508386 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
KDM3B-205ENST00000508386 PLB1Q6P1J6 1458 aa10.35□□□□□ -0.75
KDM3B-205ENST00000508386 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
KDM3B-205ENST00000508386 UHRF1BP1LA0JNW5 1464 aa10.33□□□□□ -0.76
KDM3B-205ENST00000508386 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
KDM3B-205ENST00000508386 MAP3K4Q9Y6R4 1608 aa10.31□□□□□ -0.76
KDM3B-205ENST00000508386 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
KDM3B-205ENST00000508386 CUL7Q14999 1698 aa10.31□□□□□ -0.76
KDM3B-205ENST00000508386 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
KDM3B-205ENST00000508386 KDM5BQ9UGL1 1544 aa10.3□□□□□ -0.76
KDM3B-205ENST00000508386 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
KDM3B-205ENST00000508386 KIF27Q86VH2 1401 aa10.29□□□□□ -0.76
KDM3B-205ENST00000508386 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
KDM3B-205ENST00000508386 ZCCHC11Q5TAX3 1644 aaKnown RBP10.25□□□□□ -0.77
KDM3B-205ENST00000508386 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
KDM3B-205ENST00000508386 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
KDM3B-205ENST00000508386 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
KDM3B-205ENST00000508386 CD109Q6YHK3 1445 aa10.21□□□□□ -0.78
KDM3B-205ENST00000508386 WDR7Q9Y4E6 1490 aa10.21□□□□□ -0.78
KDM3B-205ENST00000508386 MAGI3Q5TCQ9 1506 aa10.21□□□□□ -0.78
KDM3B-205ENST00000508386 UGGT2Q9NYU1 1516 aa10.21□□□□□ -0.78
KDM3B-205ENST00000508386 KIF21BO75037 1637 aa10.18□□□□□ -0.78
KDM3B-205ENST00000508386 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
KDM3B-205ENST00000508386 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
KDM3B-205ENST00000508386 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
KDM3B-205ENST00000508386 PTPRMP28827 1452 aa10.17□□□□□ -0.78
KDM3B-205ENST00000508386 ADAMTSL3P82987 1691 aa10.15□□□□□ -0.79
KDM3B-205ENST00000508386 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
KDM3B-205ENST00000508386 RAPGEF3O95398 923 aa10.14□□□□□ -0.79
KDM3B-205ENST00000508386 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
KDM3B-205ENST00000508386 RAPGEF2Q9Y4G8 1499 aa10.14□□□□□ -0.79
KDM3B-205ENST00000508386 ABCA8O94911 1581 aa10.14□□□□□ -0.79
KDM3B-205ENST00000508386 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
KDM3B-205ENST00000508386 LMTK3Q96Q04 1460 aa10.12□□□□□ -0.79
KDM3B-205ENST00000508386 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
KDM3B-205ENST00000508386 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
KDM3B-205ENST00000508386 HSPA2P54652 639 aa10.1□□□□□ -0.79
KDM3B-205ENST00000508386 ATP10BO94823 1461 aa10.09□□□□□ -0.79
KDM3B-205ENST00000508386 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
KDM3B-205ENST00000508386 MADDQ8WXG6 1647 aa10.07□□□□□ -0.8
KDM3B-205ENST00000508386 FRMPD1Q5SYB0 1578 aa10.06□□□□□ -0.8
KDM3B-205ENST00000508386 BCORL1Q5H9F3 1711 aa10.06□□□□□ -0.8
KDM3B-205ENST00000508386 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
KDM3B-205ENST00000508386 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
KDM3B-205ENST00000508386 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
KDM3B-205ENST00000508386 PHLDB1Q86UU1 1377 aa10.03□□□□□ -0.8
KDM3B-205ENST00000508386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.03□□□□□ -0.8
KDM3B-205ENST00000508386 ABCA9Q8IUA7 1624 aa10.03□□□□□ -0.8
KDM3B-205ENST00000508386 GOLGA3Q08378 1498 aa10.03□□□□□ -0.8
KDM3B-205ENST00000508386 ARID4BQ4LE39 1312 aaPredicted RBP10.03□□□□□ -0.8
KDM3B-205ENST00000508386 SIGLEC1Q9BZZ2 1709 aa10.02□□□□□ -0.81
KDM3B-205ENST00000508386 SOCS7O14512 581 aa10.01□□□□□ -0.81
KDM3B-205ENST00000508386 NEO1Q92859 1461 aa10.01□□□□□ -0.81
KDM3B-205ENST00000508386 RIMS1Q86UR5 1692 aaKnown RBP10□□□□□ -0.81
KDM3B-205ENST00000508386 CTTNBP2Q8WZ74 1663 aa10□□□□□ -0.81
KDM3B-205ENST00000508386 PRXQ9BXM0 1461 aa10□□□□□ -0.81
KDM3B-205ENST00000508386 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms