RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 PRG4Q92954 1404 aaPredicted RBP28.32■■■□□ 2.12
DDR1-263ENST00000508317 NPM1P06748 294 aaKnown RBP eCLIP28.29■■■□□ 2.12
DDR1-263ENST00000508317 IGF1RP08069 1367 aa28.2■■■□□ 2.1
DDR1-263ENST00000508317 KDM4FA0A1W2PPD8 638 aa28.19■■■□□ 2.1
DDR1-263ENST00000508317 ABCC10Q5T3U5 1492 aa28.15■■■□□ 2.1
DDR1-263ENST00000508317 FAM69CQ0P6D2 419 aa28.12■■■□□ 2.09
DDR1-263ENST00000508317 ILDR1Q86SU0 546 aaPredicted RBP28.12■■■□□ 2.09
DDR1-263ENST00000508317 KIAA0586Q9BVV6 1533 aa28.12■■■□□ 2.09
DDR1-263ENST00000508317 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
DDR1-263ENST00000508317 CUL7Q14999 1698 aa28.1■■■□□ 2.09
DDR1-263ENST00000508317 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
DDR1-263ENST00000508317 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
DDR1-263ENST00000508317 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
DDR1-263ENST00000508317 CARMIL2Q6F5E8 1435 aa28.01■■■□□ 2.07
DDR1-263ENST00000508317 ADCY10Q96PN6 1610 aa28■■■□□ 2.07
DDR1-263ENST00000508317 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
DDR1-263ENST00000508317 KDM6BO15054 1643 aa27.98■■■□□ 2.07
DDR1-263ENST00000508317 PTPRGP23470 1445 aa27.95■■■□□ 2.07
DDR1-263ENST00000508317 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
DDR1-263ENST00000508317 RAPGEF2Q9Y4G8 1499 aa27.82■■■□□ 2.04
DDR1-263ENST00000508317 TSPOAP1O95153 1857 aa27.81■■■□□ 2.04
DDR1-263ENST00000508317 IQGAP2Q13576 1575 aa27.8■■■□□ 2.04
DDR1-263ENST00000508317 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
DDR1-263ENST00000508317 ADGRL1O94910 1474 aa27.71■■■□□ 2.03
DDR1-263ENST00000508317 PPRC1Q5VV67 1664 aaKnown RBP27.69■■■□□ 2.02
DDR1-263ENST00000508317 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
DDR1-263ENST00000508317 ABCC2Q92887 1545 aa27.68■■■□□ 2.02
DDR1-263ENST00000508317 PLB1Q6P1J6 1458 aa27.66■■■□□ 2.02
DDR1-263ENST00000508317 COL17A1Q9UMD9 1497 aaPredicted RBP27.64■■■□□ 2.01
DDR1-263ENST00000508317 UHRF1BP1LA0JNW5 1464 aa27.62■■■□□ 2.01
DDR1-263ENST00000508317 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
DDR1-263ENST00000508317 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
DDR1-263ENST00000508317 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
DDR1-263ENST00000508317 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
DDR1-263ENST00000508317 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
DDR1-263ENST00000508317 GLI2P10070 1586 aa27.56■■■□□ 2
DDR1-263ENST00000508317 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
DDR1-263ENST00000508317 KDM5BQ9UGL1 1544 aa27.46■■□□□ 1.99
DDR1-263ENST00000508317 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
DDR1-263ENST00000508317 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
DDR1-263ENST00000508317 EPRSP07814 1512 aaKnown RBP27.41■■□□□ 1.98
DDR1-263ENST00000508317 TEX14Q8IWB6 1497 aa27.4■■□□□ 1.98
DDR1-263ENST00000508317 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
DDR1-263ENST00000508317 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
DDR1-263ENST00000508317 KCNH8Q96L42 1107 aa27.35■■□□□ 1.97
DDR1-263ENST00000508317 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
DDR1-263ENST00000508317 EEA1Q15075 1411 aa27.33■■□□□ 1.97
DDR1-263ENST00000508317 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
DDR1-263ENST00000508317 ZCCHC11Q5TAX3 1644 aaKnown RBP27.32■■□□□ 1.96
DDR1-263ENST00000508317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
DDR1-263ENST00000508317 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.95
DDR1-263ENST00000508317 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
DDR1-263ENST00000508317 ARID3CA6NKF2 412 aa27.23■■□□□ 1.95
DDR1-263ENST00000508317 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
DDR1-263ENST00000508317 ABCA8O94911 1581 aa27.22■■□□□ 1.95
DDR1-263ENST00000508317 FBXO41Q8TF61 875 aa27.17■■□□□ 1.94
DDR1-263ENST00000508317 MAGI3Q5TCQ9 1506 aa27.12■■□□□ 1.93
DDR1-263ENST00000508317 KIF21BO75037 1637 aa27.08■■□□□ 1.93
DDR1-263ENST00000508317 ATP10BO94823 1461 aa27.07■■□□□ 1.92
DDR1-263ENST00000508317 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
DDR1-263ENST00000508317 PLEKHD1A6NEE1 506 aa27.04■■□□□ 1.92
DDR1-263ENST00000508317 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
DDR1-263ENST00000508317 PHLDB1Q86UU1 1377 aa27.04■■□□□ 1.92
DDR1-263ENST00000508317 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
DDR1-263ENST00000508317 FHOD3Q2V2M9 1422 aa26.98■■□□□ 1.91
DDR1-263ENST00000508317 RAPGEF6Q8TEU7 1601 aa26.98■■□□□ 1.91
DDR1-263ENST00000508317 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
DDR1-263ENST00000508317 PTPRMP28827 1452 aa26.93■■□□□ 1.9
DDR1-263ENST00000508317 EFCAB5A4FU69 1503 aa26.92■■□□□ 1.9
DDR1-263ENST00000508317 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
DDR1-263ENST00000508317 ADAMTSL3P82987 1691 aa26.9■■□□□ 1.9
DDR1-263ENST00000508317 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
DDR1-263ENST00000508317 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
DDR1-263ENST00000508317 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
DDR1-263ENST00000508317 NEO1Q92859 1461 aa26.87■■□□□ 1.89
DDR1-263ENST00000508317 CDK11AQ9UQ88 783 aaPredicted RBP26.85■■□□□ 1.89
DDR1-263ENST00000508317 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
DDR1-263ENST00000508317 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
DDR1-263ENST00000508317 LMTK3Q96Q04 1460 aa26.82■■□□□ 1.88
DDR1-263ENST00000508317 ARID4BQ4LE39 1312 aaPredicted RBP26.82■■□□□ 1.88
DDR1-263ENST00000508317 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
DDR1-263ENST00000508317 FMN1Q68DA7 1419 aa26.8■■□□□ 1.88
DDR1-263ENST00000508317 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
DDR1-263ENST00000508317 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
DDR1-263ENST00000508317 FRMPD1Q5SYB0 1578 aa26.73■■□□□ 1.87
DDR1-263ENST00000508317 DENND4BO75064 1496 aaPredicted RBP26.72■■□□□ 1.87
DDR1-263ENST00000508317 FANCAO15360 1455 aa26.7■■□□□ 1.87
DDR1-263ENST00000508317 AKNAQ7Z591 1439 aa26.69■■□□□ 1.86
DDR1-263ENST00000508317 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
DDR1-263ENST00000508317 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
DDR1-263ENST00000508317 HSPA2P54652 639 aa26.63■■□□□ 1.85
DDR1-263ENST00000508317 CLIP1P30622 1438 aa26.63■■□□□ 1.85
DDR1-263ENST00000508317 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
DDR1-263ENST00000508317 CDK13Q14004 1512 aaKnown RBP26.62■■□□□ 1.85
DDR1-263ENST00000508317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.61■■□□□ 1.856e-7■■■■□ 21.9
DDR1-263ENST00000508317 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
DDR1-263ENST00000508317 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
DDR1-263ENST00000508317 RIMS1Q86UR5 1692 aaKnown RBP26.59■■□□□ 1.85
DDR1-263ENST00000508317 ILDR2Q71H61 639 aa26.58■■□□□ 1.85
DDR1-263ENST00000508317 MYT1LQ9UL68 1186 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms