RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
CAST-220ENST00000508117 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
CAST-220ENST00000508117 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
CAST-220ENST00000508117 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
CAST-220ENST00000508117 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
CAST-220ENST00000508117 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
CAST-220ENST00000508117 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CAST-220ENST00000508117 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
CAST-220ENST00000508117 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
CAST-220ENST00000508117 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
CAST-220ENST00000508117 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
CAST-220ENST00000508117 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
CAST-220ENST00000508117 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
CAST-220ENST00000508117 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
CAST-220ENST00000508117 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
CAST-220ENST00000508117 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
CAST-220ENST00000508117 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
CAST-220ENST00000508117 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
CAST-220ENST00000508117 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
CAST-220ENST00000508117 KDM6BO15054 1643 aa16.56■□□□□ 0.24
CAST-220ENST00000508117 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
CAST-220ENST00000508117 KDM4FA0A1W2PPD8 638 aa16.55■□□□□ 0.24
CAST-220ENST00000508117 KIAA0586Q9BVV6 1533 aa16.48■□□□□ 0.23
CAST-220ENST00000508117 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
CAST-220ENST00000508117 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
CAST-220ENST00000508117 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
CAST-220ENST00000508117 CUL7Q14999 1698 aa16.39■□□□□ 0.21
CAST-220ENST00000508117 GLI2P10070 1586 aa16.38■□□□□ 0.21
CAST-220ENST00000508117 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CAST-220ENST00000508117 PTPRGP23470 1445 aa16.37■□□□□ 0.21
CAST-220ENST00000508117 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
CAST-220ENST00000508117 PPRC1Q5VV67 1664 aaKnown RBP16.36■□□□□ 0.21
CAST-220ENST00000508117 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
CAST-220ENST00000508117 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.2
CAST-220ENST00000508117 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
CAST-220ENST00000508117 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
CAST-220ENST00000508117 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
CAST-220ENST00000508117 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
CAST-220ENST00000508117 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
CAST-220ENST00000508117 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
CAST-220ENST00000508117 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
CAST-220ENST00000508117 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
CAST-220ENST00000508117 MAP3K4Q9Y6R4 1608 aa16.26■□□□□ 0.19
CAST-220ENST00000508117 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
CAST-220ENST00000508117 HECW2Q9P2P5 1572 aa16.25■□□□□ 0.19
CAST-220ENST00000508117 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
CAST-220ENST00000508117 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
CAST-220ENST00000508117 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
CAST-220ENST00000508117 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
CAST-220ENST00000508117 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
CAST-220ENST00000508117 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
CAST-220ENST00000508117 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
CAST-220ENST00000508117 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
CAST-220ENST00000508117 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CAST-220ENST00000508117 UGGT2Q9NYU1 1516 aa16.15■□□□□ 0.18
CAST-220ENST00000508117 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
CAST-220ENST00000508117 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
CAST-220ENST00000508117 KIAA0556O60303 1618 aa16.1■□□□□ 0.17
CAST-220ENST00000508117 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
CAST-220ENST00000508117 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
CAST-220ENST00000508117 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
CAST-220ENST00000508117 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
CAST-220ENST00000508117 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
CAST-220ENST00000508117 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
CAST-220ENST00000508117 ABCA8O94911 1581 aa16■□□□□ 0.15
CAST-220ENST00000508117 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
CAST-220ENST00000508117 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
CAST-220ENST00000508117 KIF21BO75037 1637 aa15.98■□□□□ 0.15
CAST-220ENST00000508117 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
CAST-220ENST00000508117 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
CAST-220ENST00000508117 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
CAST-220ENST00000508117 ADAMTSL3P82987 1691 aa15.94■□□□□ 0.14
CAST-220ENST00000508117 PTPRMP28827 1452 aa15.92■□□□□ 0.14
CAST-220ENST00000508117 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
CAST-220ENST00000508117 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
CAST-220ENST00000508117 BCORL1Q5H9F3 1711 aa15.85■□□□□ 0.13
CAST-220ENST00000508117 ATP10BO94823 1461 aa15.84■□□□□ 0.13
CAST-220ENST00000508117 NEO1Q92859 1461 aa15.84■□□□□ 0.13
CAST-220ENST00000508117 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
CAST-220ENST00000508117 LMTK3Q96Q04 1460 aa15.82■□□□□ 0.12
CAST-220ENST00000508117 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
CAST-220ENST00000508117 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
CAST-220ENST00000508117 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
CAST-220ENST00000508117 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
CAST-220ENST00000508117 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
CAST-220ENST00000508117 ARHGEF40Q8TER5 1519 aa15.75■□□□□ 0.11
CAST-220ENST00000508117 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
CAST-220ENST00000508117 ARID4BQ4LE39 1312 aaPredicted RBP15.73■□□□□ 0.11
CAST-220ENST00000508117 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
CAST-220ENST00000508117 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
CAST-220ENST00000508117 RIMS1Q86UR5 1692 aaKnown RBP15.72■□□□□ 0.11
CAST-220ENST00000508117 ARID3CA6NKF2 412 aa15.71■□□□□ 0.11
CAST-220ENST00000508117 RICTORQ6R327 1708 aa15.71■□□□□ 0.1
CAST-220ENST00000508117 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
CAST-220ENST00000508117 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
CAST-220ENST00000508117 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
CAST-220ENST00000508117 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
CAST-220ENST00000508117 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
CAST-220ENST00000508117 CFAP74Q9C0B2 1584 aa15.67■□□□□ 0.1
CAST-220ENST00000508117 FANCAO15360 1455 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms