RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 PRG4Q92954 1404 aaPredicted RBP37.58■■■■□ 3.61
SNCB-204ENST00000508006 NPM1P06748 294 aaKnown RBP eCLIP37.43■■■■□ 3.58
SNCB-204ENST00000508006 CUL7Q14999 1698 aa37.37■■■■□ 3.57
SNCB-204ENST00000508006 IGF1RP08069 1367 aa37.36■■■■□ 3.57
SNCB-204ENST00000508006 EEA1Q15075 1411 aa37.35■■■■□ 3.57
SNCB-204ENST00000508006 KIF13AQ9H1H9 1805 aa37.33■■■■□ 3.57
SNCB-204ENST00000508006 RUSC2Q8N2Y8 1516 aa37.33■■■■□ 3.57
SNCB-204ENST00000508006 FAM69CQ0P6D2 419 aa37.3■■■■□ 3.56
SNCB-204ENST00000508006 KIAA0586Q9BVV6 1533 aa37.18■■■■□ 3.54
SNCB-204ENST00000508006 ABCC10Q5T3U5 1492 aa37.17■■■■□ 3.54
SNCB-204ENST00000508006 CARMIL1Q5VZK9 1371 aa37.17■■■■□ 3.54
SNCB-204ENST00000508006 MAPKBP1O60336 1514 aa37.1■■■■□ 3.53
SNCB-204ENST00000508006 CSRNP3Q8WYN3 585 aa37.1■■■■□ 3.53
SNCB-204ENST00000508006 ADCY10Q96PN6 1610 aa37.1■■■■□ 3.53
SNCB-204ENST00000508006 TTBK1Q5TCY1 1321 aaPredicted RBP37.06■■■■□ 3.52
SNCB-204ENST00000508006 RAPGEF2Q9Y4G8 1499 aa37.04■■■■□ 3.52
SNCB-204ENST00000508006 PRXQ9BXM0 1461 aa37.03■■■■□ 3.52
SNCB-204ENST00000508006 DIP2BQ9P265 1576 aa37.01■■■■□ 3.52
SNCB-204ENST00000508006 PTPRGP23470 1445 aa36.98■■■■□ 3.51
SNCB-204ENST00000508006 FAM9AQ8IZU1 332 aaPredicted RBP36.93■■■■□ 3.5
SNCB-204ENST00000508006 CARMIL2Q6F5E8 1435 aa36.91■■■■□ 3.5
SNCB-204ENST00000508006 TSPOAP1O95153 1857 aa36.9■■■■□ 3.5
SNCB-204ENST00000508006 KIF21BO75037 1637 aa36.89■■■■□ 3.5
SNCB-204ENST00000508006 KDM6BO15054 1643 aa36.86■■■■□ 3.49
SNCB-204ENST00000508006 TNIKQ9UKE5 1360 aa36.86■■■■□ 3.49
SNCB-204ENST00000508006 IQGAP2Q13576 1575 aa36.75■■■■□ 3.47
SNCB-204ENST00000508006 CTTNBP2Q8WZ74 1663 aa36.74■■■■□ 3.47
SNCB-204ENST00000508006 ABCC2Q92887 1545 aa36.74■■■■□ 3.47
SNCB-204ENST00000508006 ASXL2Q76L83 1435 aa36.68■■■■□ 3.46
SNCB-204ENST00000508006 PLB1Q6P1J6 1458 aa36.68■■■■□ 3.46
SNCB-204ENST00000508006 KDM4FA0A1W2PPD8 638 aa36.67■■■■□ 3.46
SNCB-204ENST00000508006 GOLGA3Q08378 1498 aa36.66■■■■□ 3.46
SNCB-204ENST00000508006 UACAQ9BZF9 1416 aa36.64■■■■□ 3.46
SNCB-204ENST00000508006 UHRF1BP1LA0JNW5 1464 aa36.62■■■■□ 3.45
SNCB-204ENST00000508006 DISP1Q96F81 1524 aa36.58■■■■□ 3.45
SNCB-204ENST00000508006 GLI2P10070 1586 aa36.55■■■■□ 3.44
SNCB-204ENST00000508006 UGGT2Q9NYU1 1516 aa36.49■■■■□ 3.43
SNCB-204ENST00000508006 PPRC1Q5VV67 1664 aaKnown RBP36.45■■■■□ 3.43
SNCB-204ENST00000508006 KDM5BQ9UGL1 1544 aa36.45■■■■□ 3.43
SNCB-204ENST00000508006 UBTFP17480 764 aaKnown RBP36.43■■■■□ 3.42
SNCB-204ENST00000508006 EPRSP07814 1512 aaKnown RBP36.43■■■■□ 3.42
SNCB-204ENST00000508006 KIAA0556O60303 1618 aa36.4■■■■□ 3.42
SNCB-204ENST00000508006 ZCCHC11Q5TAX3 1644 aaKnown RBP36.38■■■■□ 3.41
SNCB-204ENST00000508006 TEX14Q8IWB6 1497 aa36.36■■■■□ 3.41
SNCB-204ENST00000508006 MAP3K4Q9Y6R4 1608 aa36.34■■■■□ 3.41
SNCB-204ENST00000508006 EHMT2Q96KQ7 1210 aa36.31■■■■□ 3.4
SNCB-204ENST00000508006 COL17A1Q9UMD9 1497 aaPredicted RBP36.29■■■■□ 3.4
SNCB-204ENST00000508006 ADGRL1O94910 1474 aa36.26■■■■□ 3.4
SNCB-204ENST00000508006 SAMD9Q5K651 1589 aa36.26■■■■□ 3.39
SNCB-204ENST00000508006 WDR7Q9Y4E6 1490 aa36.24■■■■□ 3.39
SNCB-204ENST00000508006 KCNH8Q96L42 1107 aa36.24■■■■□ 3.39
SNCB-204ENST00000508006 EFCAB5A4FU69 1503 aa36.23■■■■□ 3.39
SNCB-204ENST00000508006 CD109Q6YHK3 1445 aa36.13■■■■□ 3.37
SNCB-204ENST00000508006 LOC105371045A0A1W2PR82 267 aa36.09■■■■□ 3.37
SNCB-204ENST00000508006 ABCA8O94911 1581 aa36.08■■■■□ 3.37
SNCB-204ENST00000508006 CFAP43Q8NDM7 1665 aa36.04■■■■□ 3.36
SNCB-204ENST00000508006 MAGI3Q5TCQ9 1506 aa36.03■■■■□ 3.36
SNCB-204ENST00000508006 RANGAP1P46060 587 aaPredicted RBP36.03■■■■□ 3.36
SNCB-204ENST00000508006 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
SNCB-204ENST00000508006 ARHGAP35Q9NRY4 1499 aa36.02■■■■□ 3.36
SNCB-204ENST00000508006 ARID3CA6NKF2 412 aa36.01■■■■□ 3.36
SNCB-204ENST00000508006 CLIP1P30622 1438 aa35.97■■■■□ 3.35
SNCB-204ENST00000508006 ILDR1Q86SU0 546 aaPredicted RBP35.96■■■■□ 3.35
SNCB-204ENST00000508006 FHOD3Q2V2M9 1422 aa35.93■■■■□ 3.34
SNCB-204ENST00000508006 CEP162Q5TB80 1403 aa35.93■■■■□ 3.34
SNCB-204ENST00000508006 FMN1Q68DA7 1419 aa35.85■■■■□ 3.33
SNCB-204ENST00000508006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.85■■■■□ 3.33
SNCB-204ENST00000508006 HNRNPUL2Q1KMD3 747 aaKnown RBP35.85■■■■□ 3.33
SNCB-204ENST00000508006 ATP10BO94823 1461 aa35.85■■■■□ 3.33
SNCB-204ENST00000508006 HECW2Q9P2P5 1572 aa35.85■■■■□ 3.33
SNCB-204ENST00000508006 RAPGEF6Q8TEU7 1601 aa35.79■■■■□ 3.32
SNCB-204ENST00000508006 ARAP3Q8WWN8 1544 aa35.77■■■■□ 3.32
SNCB-204ENST00000508006 PHLDB1Q86UU1 1377 aa35.73■■■■□ 3.31
SNCB-204ENST00000508006 ABCA9Q8IUA7 1624 aa35.68■■■■□ 3.3
SNCB-204ENST00000508006 RAPGEF3O95398 923 aa35.66■■■■□ 3.3
SNCB-204ENST00000508006 HECW1Q76N89 1606 aa35.63■■■■□ 3.29
SNCB-204ENST00000508006 NUP153P49790 1475 aaKnown RBP35.6■■■■□ 3.29
SNCB-204ENST00000508006 CASKIN1Q8WXD9 1431 aa35.6■■■■□ 3.29
SNCB-204ENST00000508006 NEO1Q92859 1461 aa35.58■■■■□ 3.29
SNCB-204ENST00000508006 FYCO1Q9BQS8 1478 aa35.57■■■■□ 3.28
SNCB-204ENST00000508006 PLEKHD1A6NEE1 506 aa35.57■■■■□ 3.28
SNCB-204ENST00000508006 ARID4BQ4LE39 1312 aaPredicted RBP35.57■■■■□ 3.28
SNCB-204ENST00000508006 PCF11O94913 1555 aaKnown RBP35.56■■■■□ 3.28
SNCB-204ENST00000508006 VPS8Q8N3P4 1428 aa35.5■■■■□ 3.27
SNCB-204ENST00000508006 PTPRMP28827 1452 aa35.47■■■■□ 3.27
SNCB-204ENST00000508006 CCDC18Q5T9S5 1454 aa35.45■■■■□ 3.27
SNCB-204ENST00000508006 LRRIQ1Q96JM4 1722 aa35.45■■■■□ 3.27
SNCB-204ENST00000508006 ADAMTSL3P82987 1691 aa35.43■■■■□ 3.26
SNCB-204ENST00000508006 ATP1B4Q9UN42 357 aaPredicted RBP35.41■■■■□ 3.26
SNCB-204ENST00000508006 DENND4BO75064 1496 aaPredicted RBP35.37■■■■□ 3.25
SNCB-204ENST00000508006 CDK13Q14004 1512 aaKnown RBP35.37■■■■□ 3.25
SNCB-204ENST00000508006 FRMPD1Q5SYB0 1578 aa35.36■■■■□ 3.25
SNCB-204ENST00000508006 AKNAQ7Z591 1439 aa35.36■■■■□ 3.25
SNCB-204ENST00000508006 BCORL1Q5H9F3 1711 aa35.35■■■■□ 3.25
SNCB-204ENST00000508006 FANCAO15360 1455 aa35.33■■■■□ 3.25
SNCB-204ENST00000508006 CDK11AQ9UQ88 783 aaPredicted RBP35.31■■■■□ 3.24
SNCB-204ENST00000508006 MADDQ8WXG6 1647 aa35.29■■■■□ 3.24
SNCB-204ENST00000508006 CFAP74Q9C0B2 1584 aa35.28■■■■□ 3.24
SNCB-204ENST00000508006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.27■■■■□ 3.24
SNCB-204ENST00000508006 FBXO41Q8TF61 875 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms