RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 JPH4Q96JJ6 628 aa29.67■■■□□ 2.34
SNF8-205ENST00000507302 ABCC10Q5T3U5 1492 aa29.61■■■□□ 2.33
SNF8-205ENST00000507302 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
SNF8-205ENST00000507302 ADCY10Q96PN6 1610 aa29.53■■■□□ 2.32
SNF8-205ENST00000507302 DIP2BQ9P265 1576 aa29.52■■■□□ 2.32
SNF8-205ENST00000507302 KIAA0586Q9BVV6 1533 aa29.46■■■□□ 2.31
SNF8-205ENST00000507302 FAM69CQ0P6D2 419 aa29.45■■■□□ 2.31
SNF8-205ENST00000507302 IGF1RP08069 1367 aa29.4■■■□□ 2.3
SNF8-205ENST00000507302 NPM1P06748 294 aaKnown RBP eCLIP29.4■■■□□ 2.3
SNF8-205ENST00000507302 CUL7Q14999 1698 aa29.4■■■□□ 2.3
SNF8-205ENST00000507302 KDM6BO15054 1643 aa29.31■■■□□ 2.28
SNF8-205ENST00000507302 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
SNF8-205ENST00000507302 TSPOAP1O95153 1857 aa29.23■■■□□ 2.27
SNF8-205ENST00000507302 KDM4FA0A1W2PPD8 638 aa29.22■■■□□ 2.27
SNF8-205ENST00000507302 PTPRGP23470 1445 aa29.2■■■□□ 2.26
SNF8-205ENST00000507302 ABCC2Q92887 1545 aa29.18■■■□□ 2.26
SNF8-205ENST00000507302 GLI2P10070 1586 aa29.16■■■□□ 2.26
SNF8-205ENST00000507302 PPRC1Q5VV67 1664 aaKnown RBP29.15■■■□□ 2.26
SNF8-205ENST00000507302 CARMIL1Q5VZK9 1371 aa29.14■■■□□ 2.26
SNF8-205ENST00000507302 TNIKQ9UKE5 1360 aa29.14■■■□□ 2.26
SNF8-205ENST00000507302 UHRF1BP1LA0JNW5 1464 aa29.12■■■□□ 2.25
SNF8-205ENST00000507302 CARMIL2Q6F5E8 1435 aa29.11■■■□□ 2.25
SNF8-205ENST00000507302 IQGAP2Q13576 1575 aa29.1■■■□□ 2.25
SNF8-205ENST00000507302 PLB1Q6P1J6 1458 aa29.09■■■□□ 2.25
SNF8-205ENST00000507302 ASXL2Q76L83 1435 aa29.07■■■□□ 2.24
SNF8-205ENST00000507302 DISP1Q96F81 1524 aa29.04■■■□□ 2.24
SNF8-205ENST00000507302 UACAQ9BZF9 1416 aa29■■■□□ 2.23
SNF8-205ENST00000507302 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
SNF8-205ENST00000507302 MAP3K4Q9Y6R4 1608 aa28.97■■■□□ 2.23
SNF8-205ENST00000507302 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.23
SNF8-205ENST00000507302 EPRSP07814 1512 aaKnown RBP28.94■■■□□ 2.22
SNF8-205ENST00000507302 COL17A1Q9UMD9 1497 aaPredicted RBP28.92■■■□□ 2.22
SNF8-205ENST00000507302 ZCCHC11Q5TAX3 1644 aaKnown RBP28.88■■■□□ 2.21
SNF8-205ENST00000507302 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
SNF8-205ENST00000507302 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
SNF8-205ENST00000507302 KIAA0556O60303 1618 aa28.86■■■□□ 2.21
SNF8-205ENST00000507302 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
SNF8-205ENST00000507302 TEX14Q8IWB6 1497 aa28.83■■■□□ 2.21
SNF8-205ENST00000507302 WDR7Q9Y4E6 1490 aa28.74■■■□□ 2.19
SNF8-205ENST00000507302 ILDR1Q86SU0 546 aaPredicted RBP28.7■■■□□ 2.18
SNF8-205ENST00000507302 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.18
SNF8-205ENST00000507302 MAGI3Q5TCQ9 1506 aa28.67■■■□□ 2.18
SNF8-205ENST00000507302 CFAP43Q8NDM7 1665 aa28.67■■■□□ 2.18
SNF8-205ENST00000507302 ABCA8O94911 1581 aa28.66■■■□□ 2.18
SNF8-205ENST00000507302 HECW2Q9P2P5 1572 aa28.64■■■□□ 2.18
SNF8-205ENST00000507302 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
SNF8-205ENST00000507302 CD109Q6YHK3 1445 aa28.57■■■□□ 2.16
SNF8-205ENST00000507302 PRXQ9BXM0 1461 aa28.52■■■□□ 2.16
SNF8-205ENST00000507302 ARAP3Q8WWN8 1544 aa28.47■■■□□ 2.15
SNF8-205ENST00000507302 KIF21BO75037 1637 aa28.41■■■□□ 2.14
SNF8-205ENST00000507302 KCNH8Q96L42 1107 aa28.41■■■□□ 2.14
SNF8-205ENST00000507302 ABCA9Q8IUA7 1624 aa28.37■■■□□ 2.13
SNF8-205ENST00000507302 ATP10BO94823 1461 aa28.37■■■□□ 2.13
SNF8-205ENST00000507302 PHLDB1Q86UU1 1377 aa28.34■■■□□ 2.13
SNF8-205ENST00000507302 ADAMTSL3P82987 1691 aa28.31■■■□□ 2.12
SNF8-205ENST00000507302 SAMD9Q5K651 1589 aa28.29■■■□□ 2.12
SNF8-205ENST00000507302 NEO1Q92859 1461 aa28.24■■■□□ 2.11
SNF8-205ENST00000507302 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
SNF8-205ENST00000507302 PTPRMP28827 1452 aa28.21■■■□□ 2.11
SNF8-205ENST00000507302 FRMPD1Q5SYB0 1578 aa28.2■■■□□ 2.11
SNF8-205ENST00000507302 BCORL1Q5H9F3 1711 aa28.17■■■□□ 2.1
SNF8-205ENST00000507302 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
SNF8-205ENST00000507302 P3H3Q8IVL6 736 aa28.14■■■□□ 2.1
SNF8-205ENST00000507302 ARID3CA6NKF2 412 aa28.13■■■□□ 2.09
SNF8-205ENST00000507302 RAPGEF3O95398 923 aa28.13■■■□□ 2.09
SNF8-205ENST00000507302 NUP153P49790 1475 aaKnown RBP28.12■■■□□ 2.09
SNF8-205ENST00000507302 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
SNF8-205ENST00000507302 MADDQ8WXG6 1647 aa28.08■■■□□ 2.09
SNF8-205ENST00000507302 RICTORQ6R327 1708 aa28.06■■■□□ 2.08
SNF8-205ENST00000507302 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
SNF8-205ENST00000507302 ARHGEF40Q8TER5 1519 aa28.05■■■□□ 2.08
SNF8-205ENST00000507302 PCF11O94913 1555 aaKnown RBP28.04■■■□□ 2.08
SNF8-205ENST00000507302 LMTK3Q96Q04 1460 aa28.02■■■□□ 2.08
SNF8-205ENST00000507302 FHOD3Q2V2M9 1422 aa28■■■□□ 2.07
SNF8-205ENST00000507302 CFAP74Q9C0B2 1584 aa27.98■■■□□ 2.07
SNF8-205ENST00000507302 DENND4BO75064 1496 aaPredicted RBP27.97■■■□□ 2.07
SNF8-205ENST00000507302 ZMYM4Q5VZL5 1548 aa27.97■■■□□ 2.07
SNF8-205ENST00000507302 AKNAQ7Z591 1439 aa27.95■■■□□ 2.07
SNF8-205ENST00000507302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.06
SNF8-205ENST00000507302 EEA1Q15075 1411 aa27.94■■■□□ 2.06
SNF8-205ENST00000507302 RIMS1Q86UR5 1692 aaKnown RBP27.94■■■□□ 2.06
SNF8-205ENST00000507302 FANCAO15360 1455 aa27.92■■■□□ 2.06
SNF8-205ENST00000507302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.91■■■□□ 2.06
SNF8-205ENST00000507302 HNRNPUL2Q1KMD3 747 aaKnown RBP27.91■■■□□ 2.06
SNF8-205ENST00000507302 SIGLEC1Q9BZZ2 1709 aa27.91■■■□□ 2.06
SNF8-205ENST00000507302 PLEKHD1A6NEE1 506 aa27.9■■■□□ 2.06
SNF8-205ENST00000507302 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
SNF8-205ENST00000507302 ARID4BQ4LE39 1312 aaPredicted RBP27.89■■■□□ 2.05
SNF8-205ENST00000507302 EFCAB5A4FU69 1503 aa27.88■■■□□ 2.05
SNF8-205ENST00000507302 MAGI2Q86UL8 1455 aa27.87■■■□□ 2.05
SNF8-205ENST00000507302 ZFYVE16Q7Z3T8 1539 aa27.83■■■□□ 2.05
SNF8-205ENST00000507302 POGZQ7Z3K3 1410 aa27.82■■■□□ 2.04
SNF8-205ENST00000507302 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
SNF8-205ENST00000507302 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
SNF8-205ENST00000507302 PLCH2O75038 1416 aa27.76■■■□□ 2.04
SNF8-205ENST00000507302 FER1L4A9Z1Z3 1794 aa27.74■■■□□ 2.03
SNF8-205ENST00000507302 CDK13Q14004 1512 aaKnown RBP27.74■■■□□ 2.03
SNF8-205ENST00000507302 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
SNF8-205ENST00000507302 SCAPERQ9BY12 1400 aa27.7■■■□□ 2.03
SNF8-205ENST00000507302 RANGAP1P46060 587 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms