RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 IGF1RP08069 1367 aa19.88■□□□□ 0.77
CCHCR1-220ENST00000506831 KIF13AQ9H1H9 1805 aa19.87■□□□□ 0.77
CCHCR1-220ENST00000506831 KIF27Q86VH2 1401 aa19.86■□□□□ 0.77
CCHCR1-220ENST00000506831 KIAA0586Q9BVV6 1533 aa19.86■□□□□ 0.77
CCHCR1-220ENST00000506831 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCHCR1-220ENST00000506831 CUL7Q14999 1698 aa19.83■□□□□ 0.76
CCHCR1-220ENST00000506831 ABCC10Q5T3U5 1492 aa19.81■□□□□ 0.76
CCHCR1-220ENST00000506831 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
CCHCR1-220ENST00000506831 FAM69CQ0P6D2 419 aa19.77■□□□□ 0.76
CCHCR1-220ENST00000506831 ADCY10Q96PN6 1610 aa19.76■□□□□ 0.75
CCHCR1-220ENST00000506831 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
CCHCR1-220ENST00000506831 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
CCHCR1-220ENST00000506831 PTPRGP23470 1445 aa19.68■□□□□ 0.74
CCHCR1-220ENST00000506831 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
CCHCR1-220ENST00000506831 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
CCHCR1-220ENST00000506831 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
CCHCR1-220ENST00000506831 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
CCHCR1-220ENST00000506831 KDM6BO15054 1643 aa19.58■□□□□ 0.72
CCHCR1-220ENST00000506831 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
CCHCR1-220ENST00000506831 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
CCHCR1-220ENST00000506831 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
CCHCR1-220ENST00000506831 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
CCHCR1-220ENST00000506831 DISP1Q96F81 1524 aa19.54■□□□□ 0.72
CCHCR1-220ENST00000506831 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
CCHCR1-220ENST00000506831 GLI2P10070 1586 aa19.53■□□□□ 0.72
CCHCR1-220ENST00000506831 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
CCHCR1-220ENST00000506831 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
CCHCR1-220ENST00000506831 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
CCHCR1-220ENST00000506831 KDM5BQ9UGL1 1544 aa19.48■□□□□ 0.71
CCHCR1-220ENST00000506831 KDM4FA0A1W2PPD8 638 aa19.45■□□□□ 0.7
CCHCR1-220ENST00000506831 PPRC1Q5VV67 1664 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-220ENST00000506831 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
CCHCR1-220ENST00000506831 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-220ENST00000506831 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
CCHCR1-220ENST00000506831 MAP3K4Q9Y6R4 1608 aa19.37■□□□□ 0.69
CCHCR1-220ENST00000506831 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
CCHCR1-220ENST00000506831 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
CCHCR1-220ENST00000506831 CTTNBP2Q8WZ74 1663 aa19.36■□□□□ 0.69
CCHCR1-220ENST00000506831 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
CCHCR1-220ENST00000506831 COL17A1Q9UMD9 1497 aaPredicted RBP19.32■□□□□ 0.68
CCHCR1-220ENST00000506831 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
CCHCR1-220ENST00000506831 ABCA8O94911 1581 aa19.28■□□□□ 0.68
CCHCR1-220ENST00000506831 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
CCHCR1-220ENST00000506831 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
CCHCR1-220ENST00000506831 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-220ENST00000506831 CD109Q6YHK3 1445 aa19.23■□□□□ 0.67
CCHCR1-220ENST00000506831 CFAP43Q8NDM7 1665 aa19.23■□□□□ 0.67
CCHCR1-220ENST00000506831 KCNH8Q96L42 1107 aa19.19■□□□□ 0.66
CCHCR1-220ENST00000506831 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
CCHCR1-220ENST00000506831 ATP10BO94823 1461 aa19.12■□□□□ 0.65
CCHCR1-220ENST00000506831 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
CCHCR1-220ENST00000506831 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
CCHCR1-220ENST00000506831 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
CCHCR1-220ENST00000506831 SAMD9Q5K651 1589 aa19.09■□□□□ 0.65
CCHCR1-220ENST00000506831 EEA1Q15075 1411 aa19.07■□□□□ 0.64
CCHCR1-220ENST00000506831 ABCA9Q8IUA7 1624 aa19.06■□□□□ 0.64
CCHCR1-220ENST00000506831 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
CCHCR1-220ENST00000506831 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
CCHCR1-220ENST00000506831 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
CCHCR1-220ENST00000506831 NEO1Q92859 1461 aa18.99■□□□□ 0.63
CCHCR1-220ENST00000506831 KIF21BO75037 1637 aa18.97■□□□□ 0.63
CCHCR1-220ENST00000506831 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
CCHCR1-220ENST00000506831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-220ENST00000506831 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-220ENST00000506831 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-220ENST00000506831 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
CCHCR1-220ENST00000506831 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
CCHCR1-220ENST00000506831 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
CCHCR1-220ENST00000506831 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
CCHCR1-220ENST00000506831 ADAMTSL3P82987 1691 aa18.89■□□□□ 0.61
CCHCR1-220ENST00000506831 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-220ENST00000506831 FRMPD1Q5SYB0 1578 aa18.86■□□□□ 0.61
CCHCR1-220ENST00000506831 PTPRMP28827 1452 aa18.85■□□□□ 0.61
CCHCR1-220ENST00000506831 DENND4BO75064 1496 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-220ENST00000506831 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
CCHCR1-220ENST00000506831 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.6
CCHCR1-220ENST00000506831 CFAP74Q9C0B2 1584 aa18.82■□□□□ 0.6
CCHCR1-220ENST00000506831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCHCR1-220ENST00000506831 FANCAO15360 1455 aa18.82■□□□□ 0.6
CCHCR1-220ENST00000506831 RICTORQ6R327 1708 aa18.8■□□□□ 0.6
CCHCR1-220ENST00000506831 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-220ENST00000506831 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
CCHCR1-220ENST00000506831 ZMYM4Q5VZL5 1548 aa18.76■□□□□ 0.59
CCHCR1-220ENST00000506831 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
CCHCR1-220ENST00000506831 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
CCHCR1-220ENST00000506831 MADDQ8WXG6 1647 aa18.75■□□□□ 0.59
CCHCR1-220ENST00000506831 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
CCHCR1-220ENST00000506831 PLCH2O75038 1416 aa18.74■□□□□ 0.59
CCHCR1-220ENST00000506831 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
CCHCR1-220ENST00000506831 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-220ENST00000506831 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
CCHCR1-220ENST00000506831 CDK11AQ9UQ88 783 aaPredicted RBP18.71■□□□□ 0.59
CCHCR1-220ENST00000506831 ZFYVE16Q7Z3T8 1539 aa18.7■□□□□ 0.58
CCHCR1-220ENST00000506831 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
CCHCR1-220ENST00000506831 HECW1Q76N89 1606 aa18.69■□□□□ 0.58
CCHCR1-220ENST00000506831 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
CCHCR1-220ENST00000506831 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
CCHCR1-220ENST00000506831 LMTK3Q96Q04 1460 aa18.68■□□□□ 0.58
CCHCR1-220ENST00000506831 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
CCHCR1-220ENST00000506831 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 733.3 ms