RNA–Protein interactions for RNA: ENST00000506753.1

TNIP3-202, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TNIP3, Length 1,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-202ENST00000506753 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
TNIP3-202ENST00000506753 POTEMA6NI47 508 aa10.23□□□□□ -0.77
TNIP3-202ENST00000506753 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
TNIP3-202ENST00000506753 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
TNIP3-202ENST00000506753 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
TNIP3-202ENST00000506753 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
TNIP3-202ENST00000506753 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
TNIP3-202ENST00000506753 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
TNIP3-202ENST00000506753 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
TNIP3-202ENST00000506753 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
TNIP3-202ENST00000506753 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
TNIP3-202ENST00000506753 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
TNIP3-202ENST00000506753 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
TNIP3-202ENST00000506753 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
TNIP3-202ENST00000506753 BAZ1AQ9NRL2 1556 aaPredicted RBP10.08□□□□□ -0.8
TNIP3-202ENST00000506753 MIER1Q8N108 512 aa10.07□□□□□ -0.8
TNIP3-202ENST00000506753 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
TNIP3-202ENST00000506753 MROH2BQ7Z745 1585 aa10.05□□□□□ -0.8
TNIP3-202ENST00000506753 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
TNIP3-202ENST00000506753 PEG3Q9GZU2 1588 aa10□□□□□ -0.81
TNIP3-202ENST00000506753 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
TNIP3-202ENST00000506753 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
TNIP3-202ENST00000506753 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
TNIP3-202ENST00000506753 WIZO95785 1651 aa9.98□□□□□ -0.81
TNIP3-202ENST00000506753 CC2D2AQ9P2K1 1620 aa9.97□□□□□ -0.81
TNIP3-202ENST00000506753 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
TNIP3-202ENST00000506753 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
TNIP3-202ENST00000506753 SMARCA2P51531 1590 aa9.93□□□□□ -0.82
TNIP3-202ENST00000506753 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
TNIP3-202ENST00000506753 ATAD2BQ9ULI0 1458 aa9.92□□□□□ -0.82
TNIP3-202ENST00000506753 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
TNIP3-202ENST00000506753 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
TNIP3-202ENST00000506753 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
TNIP3-202ENST00000506753 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
TNIP3-202ENST00000506753 HMGXB3Q12766 1538 aa9.89□□□□□ -0.83
TNIP3-202ENST00000506753 NCAPD3P42695 1498 aa9.88□□□□□ -0.83
TNIP3-202ENST00000506753 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
TNIP3-202ENST00000506753 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
TNIP3-202ENST00000506753 C7P10643 843 aa9.87□□□□□ -0.83
TNIP3-202ENST00000506753 ASTLQ6HA08 431 aaPredicted RBP9.87□□□□□ -0.83
TNIP3-202ENST00000506753 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
TNIP3-202ENST00000506753 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
TNIP3-202ENST00000506753 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
TNIP3-202ENST00000506753 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
TNIP3-202ENST00000506753 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
TNIP3-202ENST00000506753 ATMINO43313 823 aaPredicted RBP9.82□□□□□ -0.84
TNIP3-202ENST00000506753 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
TNIP3-202ENST00000506753 NUBP1P53384 320 aa9.79□□□□□ -0.84
TNIP3-202ENST00000506753 TSPYL2Q9H2G4 693 aaPredicted RBP9.79□□□□□ -0.84
TNIP3-202ENST00000506753 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
TNIP3-202ENST00000506753 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
TNIP3-202ENST00000506753 FAM212AQ96EL1 285 aa9.77□□□□□ -0.85
TNIP3-202ENST00000506753 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
TNIP3-202ENST00000506753 MS4A3Q96HJ5 214 aa9.75□□□□□ -0.85
TNIP3-202ENST00000506753 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
TNIP3-202ENST00000506753 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
TNIP3-202ENST00000506753 GSE1Q14687 1217 aa9.7□□□□□ -0.86
TNIP3-202ENST00000506753 CDAN1Q8IWY9 1227 aa9.7□□□□□ -0.86
TNIP3-202ENST00000506753 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
TNIP3-202ENST00000506753 MYT1Q01538 1121 aa9.68□□□□□ -0.86
TNIP3-202ENST00000506753 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
TNIP3-202ENST00000506753 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
TNIP3-202ENST00000506753 POTEFA5A3E0 1075 aa9.66□□□□□ -0.86
TNIP3-202ENST00000506753 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
TNIP3-202ENST00000506753 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
TNIP3-202ENST00000506753 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
TNIP3-202ENST00000506753 CFTRP13569 1480 aa9.6□□□□□ -0.87
TNIP3-202ENST00000506753 PYGBP11216 843 aa9.6□□□□□ -0.87
TNIP3-202ENST00000506753 NESP48681 1621 aa9.58□□□□□ -0.88
TNIP3-202ENST00000506753 MAP3K13O43283 966 aa9.58□□□□□ -0.88
TNIP3-202ENST00000506753 TRIM41Q8WV44 630 aa9.58□□□□□ -0.88
TNIP3-202ENST00000506753 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
TNIP3-202ENST00000506753 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
TNIP3-202ENST00000506753 CADPSQ9ULU8 1353 aa9.57□□□□□ -0.88
TNIP3-202ENST00000506753 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
TNIP3-202ENST00000506753 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
TNIP3-202ENST00000506753 KIF21AQ7Z4S6 1674 aa9.54□□□□□ -0.88
TNIP3-202ENST00000506753 MMRN1Q13201 1228 aa9.53□□□□□ -0.88
TNIP3-202ENST00000506753 TIE1P35590 1138 aa9.51□□□□□ -0.89
TNIP3-202ENST00000506753 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
TNIP3-202ENST00000506753 ST18O60284 1047 aa9.5□□□□□ -0.89
TNIP3-202ENST00000506753 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
TNIP3-202ENST00000506753 IFNL1Q8IU54 200 aa9.5□□□□□ -0.89
TNIP3-202ENST00000506753 TRPC6Q9Y210 931 aa9.5□□□□□ -0.89
TNIP3-202ENST00000506753 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
TNIP3-202ENST00000506753 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
TNIP3-202ENST00000506753 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
TNIP3-202ENST00000506753 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
TNIP3-202ENST00000506753 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
TNIP3-202ENST00000506753 SEC24BO95487 1268 aa9.46□□□□□ -0.9
TNIP3-202ENST00000506753 PKD2Q13563 968 aa9.46□□□□□ -0.9
TNIP3-202ENST00000506753 PDS5BQ9NTI5 1447 aa9.46□□□□□ -0.9
TNIP3-202ENST00000506753 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
TNIP3-202ENST00000506753 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
TNIP3-202ENST00000506753 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
TNIP3-202ENST00000506753 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
TNIP3-202ENST00000506753 IER5LQ5T953 404 aa9.43□□□□□ -0.9
TNIP3-202ENST00000506753 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
TNIP3-202ENST00000506753 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
TNIP3-202ENST00000506753 TOP2BQ02880 1626 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms