RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 SNAPC4Q5SXM2 1469 aa28.96■■■□□ 2.23
SMN2-206ENST00000506734 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
SMN2-206ENST00000506734 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
SMN2-206ENST00000506734 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
SMN2-206ENST00000506734 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
SMN2-206ENST00000506734 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
SMN2-206ENST00000506734 SAMD9Q5K651 1589 aa28.8■■■□□ 2.2
SMN2-206ENST00000506734 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
SMN2-206ENST00000506734 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
SMN2-206ENST00000506734 APLP2Q06481 763 aa28.72■■■□□ 2.19
SMN2-206ENST00000506734 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
SMN2-206ENST00000506734 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
SMN2-206ENST00000506734 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
SMN2-206ENST00000506734 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
SMN2-206ENST00000506734 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
SMN2-206ENST00000506734 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
SMN2-206ENST00000506734 NUP160Q12769 1436 aa28.64■■■□□ 2.18
SMN2-206ENST00000506734 FMN1Q68DA7 1419 aa28.64■■■□□ 2.18
SMN2-206ENST00000506734 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
SMN2-206ENST00000506734 PCF11O94913 1555 aaKnown RBP28.62■■■□□ 2.17
SMN2-206ENST00000506734 FYCO1Q9BQS8 1478 aa28.6■■■□□ 2.17
SMN2-206ENST00000506734 CASKIN1Q8WXD9 1431 aa28.59■■■□□ 2.17
SMN2-206ENST00000506734 TIAM1Q13009 1591 aa28.55■■■□□ 2.16
SMN2-206ENST00000506734 FBLN2P98095 1184 aa28.54■■■□□ 2.16
SMN2-206ENST00000506734 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
SMN2-206ENST00000506734 CFAP43Q8NDM7 1665 aa28.51■■■□□ 2.15
SMN2-206ENST00000506734 DISP1Q96F81 1524 aa28.49■■■□□ 2.15
SMN2-206ENST00000506734 KIAA0556O60303 1618 aa28.49■■■□□ 2.15
SMN2-206ENST00000506734 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
SMN2-206ENST00000506734 CHD1O14646 1710 aa28.46■■■□□ 2.15
SMN2-206ENST00000506734 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
SMN2-206ENST00000506734 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
SMN2-206ENST00000506734 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
SMN2-206ENST00000506734 HECW1Q76N89 1606 aa28.33■■■□□ 2.13
SMN2-206ENST00000506734 LRRIQ1Q96JM4 1722 aa28.33■■■□□ 2.13
SMN2-206ENST00000506734 ATP1B4Q9UN42 357 aaPredicted RBP28.31■■■□□ 2.12
SMN2-206ENST00000506734 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
SMN2-206ENST00000506734 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.11
SMN2-206ENST00000506734 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
SMN2-206ENST00000506734 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
SMN2-206ENST00000506734 EPRSP07814 1512 aaKnown RBP28.21■■■□□ 2.11
SMN2-206ENST00000506734 CLASP1Q7Z460 1538 aa28.19■■■□□ 2.1
SMN2-206ENST00000506734 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
SMN2-206ENST00000506734 HRCP23327 699 aa28.18■■■□□ 2.1
SMN2-206ENST00000506734 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
SMN2-206ENST00000506734 MTUS2Q5JR59 1369 aa28.15■■■□□ 2.1
SMN2-206ENST00000506734 NUP153P49790 1475 aaKnown RBP28.14■■■□□ 2.1
SMN2-206ENST00000506734 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
SMN2-206ENST00000506734 CCNB3Q8WWL7 1395 aa28.12■■■□□ 2.09
SMN2-206ENST00000506734 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
SMN2-206ENST00000506734 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
SMN2-206ENST00000506734 PLB1Q6P1J6 1458 aa28.09■■■□□ 2.09
SMN2-206ENST00000506734 ABCA8O94911 1581 aa28.09■■■□□ 2.09
SMN2-206ENST00000506734 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
SMN2-206ENST00000506734 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
SMN2-206ENST00000506734 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
SMN2-206ENST00000506734 PTPRGP23470 1445 aa28.02■■■□□ 2.08
SMN2-206ENST00000506734 HNRNPUL2Q1KMD3 747 aaKnown RBP27.99■■■□□ 2.07
SMN2-206ENST00000506734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMN2-206ENST00000506734 ERCC6L2Q5T890 1561 aa27.96■■■□□ 2.07
SMN2-206ENST00000506734 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
SMN2-206ENST00000506734 MYOM3Q5VTT5 1437 aa27.94■■■□□ 2.06
SMN2-206ENST00000506734 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
SMN2-206ENST00000506734 ARID3CA6NKF2 412 aa27.9■■■□□ 2.06
SMN2-206ENST00000506734 UACAQ9BZF9 1416 aa27.89■■■□□ 2.05
SMN2-206ENST00000506734 TROQ12816 1431 aaPredicted RBP27.88■■■□□ 2.05
SMN2-206ENST00000506734 ATP10BO94823 1461 aa27.87■■■□□ 2.05
SMN2-206ENST00000506734 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
SMN2-206ENST00000506734 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
SMN2-206ENST00000506734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
SMN2-206ENST00000506734 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
SMN2-206ENST00000506734 FAM50AQ14320 339 aaKnown RBP27.81■■■□□ 2.04
SMN2-206ENST00000506734 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
SMN2-206ENST00000506734 MIA2Q96PC5 1412 aa27.81■■■□□ 2.04
SMN2-206ENST00000506734 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
SMN2-206ENST00000506734 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
SMN2-206ENST00000506734 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
SMN2-206ENST00000506734 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
SMN2-206ENST00000506734 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
SMN2-206ENST00000506734 KIF14Q15058 1648 aa27.72■■■□□ 2.03
SMN2-206ENST00000506734 ITGAEP38570 1179 aa27.71■■■□□ 2.03
SMN2-206ENST00000506734 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
SMN2-206ENST00000506734 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
SMN2-206ENST00000506734 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
SMN2-206ENST00000506734 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
SMN2-206ENST00000506734 SETD5Q9C0A6 1442 aa27.63■■■□□ 2.01
SMN2-206ENST00000506734 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
SMN2-206ENST00000506734 PTPRKQ15262 1439 aa27.6■■■□□ 2.01
SMN2-206ENST00000506734 RAB3GAP2Q9H2M9 1393 aa27.58■■■□□ 2.01
SMN2-206ENST00000506734 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
SMN2-206ENST00000506734 HFM1A2PYH4 1435 aa27.54■■■□□ 2
SMN2-206ENST00000506734 DHX57Q6P158 1386 aaKnown RBP27.53■■■□□ 2
SMN2-206ENST00000506734 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
SMN2-206ENST00000506734 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
SMN2-206ENST00000506734 CAMSAP2Q08AD1 1489 aa27.51■■■□□ 2
SMN2-206ENST00000506734 AKNAQ7Z591 1439 aa27.51■■□□□ 1.99
SMN2-206ENST00000506734 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
SMN2-206ENST00000506734 DAPK1P53355 1430 aa27.48■■□□□ 1.99
SMN2-206ENST00000506734 PREX2Q70Z35 1606 aa27.46■■□□□ 1.99
SMN2-206ENST00000506734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms