RNA–Protein interactions for RNA: ENST00000506661.2

HOPX-208, Transcript of HOP homeobox, humanhuman

Gene HOPX, Length 2,540 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOPX-208ENST00000506661 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
HOPX-208ENST00000506661 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
HOPX-208ENST00000506661 ACIN1Q9UKV3 1341 aaKnown RBP12.84□□□□□ -0.35
HOPX-208ENST00000506661 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
HOPX-208ENST00000506661 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
HOPX-208ENST00000506661 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
HOPX-208ENST00000506661 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
HOPX-208ENST00000506661 ARID3AQ99856 593 aa12.78□□□□□ -0.36
HOPX-208ENST00000506661 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
HOPX-208ENST00000506661 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
HOPX-208ENST00000506661 TRHP20396 242 aaPredicted RBP12.73□□□□□ -0.37
HOPX-208ENST00000506661 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
HOPX-208ENST00000506661 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
HOPX-208ENST00000506661 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
HOPX-208ENST00000506661 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
HOPX-208ENST00000506661 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
HOPX-208ENST00000506661 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
HOPX-208ENST00000506661 ZBTB7CA1YPR0 619 aa12.68□□□□□ -0.38
HOPX-208ENST00000506661 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
HOPX-208ENST00000506661 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
HOPX-208ENST00000506661 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
HOPX-208ENST00000506661 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
HOPX-208ENST00000506661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
HOPX-208ENST00000506661 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
HOPX-208ENST00000506661 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
HOPX-208ENST00000506661 FGD1P98174 961 aa12.61□□□□□ -0.39
HOPX-208ENST00000506661 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
HOPX-208ENST00000506661 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
HOPX-208ENST00000506661 PKD2Q13563 968 aa12.58□□□□□ -0.4
HOPX-208ENST00000506661 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
HOPX-208ENST00000506661 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
HOPX-208ENST00000506661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.54□□□□□ -0.4
HOPX-208ENST00000506661 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.4
HOPX-208ENST00000506661 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
HOPX-208ENST00000506661 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
HOPX-208ENST00000506661 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
HOPX-208ENST00000506661 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
HOPX-208ENST00000506661 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
HOPX-208ENST00000506661 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
HOPX-208ENST00000506661 ZMYND15Q9H091 742 aa12.44□□□□□ -0.42
HOPX-208ENST00000506661 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
HOPX-208ENST00000506661 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
HOPX-208ENST00000506661 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
HOPX-208ENST00000506661 RAD21O60216 631 aa12.42□□□□□ -0.42
HOPX-208ENST00000506661 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
HOPX-208ENST00000506661 KCTD17Q8N5Z5 321 aa12.42□□□□□ -0.42
HOPX-208ENST00000506661 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
HOPX-208ENST00000506661 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
HOPX-208ENST00000506661 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
HOPX-208ENST00000506661 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
HOPX-208ENST00000506661 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
HOPX-208ENST00000506661 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
HOPX-208ENST00000506661 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
HOPX-208ENST00000506661 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
HOPX-208ENST00000506661 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
HOPX-208ENST00000506661 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
HOPX-208ENST00000506661 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
HOPX-208ENST00000506661 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
HOPX-208ENST00000506661 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
HOPX-208ENST00000506661 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
HOPX-208ENST00000506661 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
HOPX-208ENST00000506661 WIZO95785 1651 aa12.31□□□□□ -0.44
HOPX-208ENST00000506661 MIER1Q8N108 512 aa12.31□□□□□ -0.44
HOPX-208ENST00000506661 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
HOPX-208ENST00000506661 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
HOPX-208ENST00000506661 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
HOPX-208ENST00000506661 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
HOPX-208ENST00000506661 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
HOPX-208ENST00000506661 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
HOPX-208ENST00000506661 AAMPQ13685 434 aa12.27□□□□□ -0.45
HOPX-208ENST00000506661 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
HOPX-208ENST00000506661 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.45
HOPX-208ENST00000506661 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
HOPX-208ENST00000506661 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
HOPX-208ENST00000506661 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
HOPX-208ENST00000506661 TICAM2Q86XR7 235 aa12.24□□□□□ -0.45
HOPX-208ENST00000506661 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
HOPX-208ENST00000506661 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
HOPX-208ENST00000506661 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
HOPX-208ENST00000506661 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
HOPX-208ENST00000506661 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
HOPX-208ENST00000506661 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
HOPX-208ENST00000506661 TMED8Q6PL24 325 aaPredicted RBP12.2□□□□□ -0.46
HOPX-208ENST00000506661 APBB1O00213 710 aa12.2□□□□□ -0.46
HOPX-208ENST00000506661 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
HOPX-208ENST00000506661 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
HOPX-208ENST00000506661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
HOPX-208ENST00000506661 PSMD1Q99460 953 aa12.16□□□□□ -0.46
HOPX-208ENST00000506661 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
HOPX-208ENST00000506661 SOGA1O94964 1423 aa12.15□□□□□ -0.46
HOPX-208ENST00000506661 CLSTN1O94985 981 aa12.14□□□□□ -0.47
HOPX-208ENST00000506661 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
HOPX-208ENST00000506661 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
HOPX-208ENST00000506661 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
HOPX-208ENST00000506661 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
HOPX-208ENST00000506661 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
HOPX-208ENST00000506661 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
HOPX-208ENST00000506661 EEA1Q15075 1411 aa12.11□□□□□ -0.47
HOPX-208ENST00000506661 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
HOPX-208ENST00000506661 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms