RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
TNPO1-204ENST00000506351 ADAMTS12P58397 1594 aa11.18□□□□□ -0.62
TNPO1-204ENST00000506351 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
TNPO1-204ENST00000506351 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
TNPO1-204ENST00000506351 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
TNPO1-204ENST00000506351 IFT140Q96RY7 1462 aa11.15□□□□□ -0.63
TNPO1-204ENST00000506351 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
TNPO1-204ENST00000506351 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
TNPO1-204ENST00000506351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
TNPO1-204ENST00000506351 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
TNPO1-204ENST00000506351 FHOD3Q2V2M9 1422 aa11.12□□□□□ -0.63
TNPO1-204ENST00000506351 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
TNPO1-204ENST00000506351 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
TNPO1-204ENST00000506351 AQRO60306 1485 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■■■ 31.2
TNPO1-204ENST00000506351 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
TNPO1-204ENST00000506351 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
TNPO1-204ENST00000506351 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
TNPO1-204ENST00000506351 ZNF608Q9ULD9 1512 aaPredicted RBP11.1□□□□□ -0.63
TNPO1-204ENST00000506351 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
TNPO1-204ENST00000506351 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
TNPO1-204ENST00000506351 LRRC9Q6ZRR7 1453 aa11.08□□□□□ -0.64
TNPO1-204ENST00000506351 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
TNPO1-204ENST00000506351 SNAPC4Q5SXM2 1469 aa11.08□□□□□ -0.64
TNPO1-204ENST00000506351 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
TNPO1-204ENST00000506351 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
TNPO1-204ENST00000506351 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
TNPO1-204ENST00000506351 CCNB3Q8WWL7 1395 aa11.02□□□□□ -0.65
TNPO1-204ENST00000506351 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
TNPO1-204ENST00000506351 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
TNPO1-204ENST00000506351 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
TNPO1-204ENST00000506351 GRIN2AQ12879 1464 aa11□□□□□ -0.65
TNPO1-204ENST00000506351 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
TNPO1-204ENST00000506351 SUPT6HQ7KZ85 1726 aaKnown RBP10.98□□□□□ -0.65
TNPO1-204ENST00000506351 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
TNPO1-204ENST00000506351 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
TNPO1-204ENST00000506351 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
TNPO1-204ENST00000506351 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.65
TNPO1-204ENST00000506351 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.66
TNPO1-204ENST00000506351 SYNJ2O15056 1496 aa10.96□□□□□ -0.66
TNPO1-204ENST00000506351 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
TNPO1-204ENST00000506351 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
TNPO1-204ENST00000506351 MAGI3Q5TCQ9 1506 aa10.93□□□□□ -0.66
TNPO1-204ENST00000506351 ARHGEF11O15085 1522 aa10.91□□□□□ -0.66
TNPO1-204ENST00000506351 RAPGEF6Q8TEU7 1601 aa10.91□□□□□ -0.66
TNPO1-204ENST00000506351 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
TNPO1-204ENST00000506351 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
TNPO1-204ENST00000506351 EPRSP07814 1512 aaKnown RBP10.9□□□□□ -0.66
TNPO1-204ENST00000506351 NCOA2Q15596 1464 aa10.9□□□□□ -0.66
TNPO1-204ENST00000506351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.67
TNPO1-204ENST00000506351 NUP160Q12769 1436 aa10.9□□□□□ -0.67
TNPO1-204ENST00000506351 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.67
TNPO1-204ENST00000506351 CHD1O14646 1710 aa10.89□□□□□ -0.67
TNPO1-204ENST00000506351 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
TNPO1-204ENST00000506351 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
TNPO1-204ENST00000506351 CLSPNQ9HAW4 1339 aa10.87□□□□□ -0.67
TNPO1-204ENST00000506351 MYOM3Q5VTT5 1437 aa10.86□□□□□ -0.67
TNPO1-204ENST00000506351 ITGAEP38570 1179 aa10.86□□□□□ -0.67
TNPO1-204ENST00000506351 RAB3GAP2Q9H2M9 1393 aa10.85□□□□□ -0.67
TNPO1-204ENST00000506351 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
TNPO1-204ENST00000506351 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
TNPO1-204ENST00000506351 NUP153P49790 1475 aaKnown RBP10.84□□□□□ -0.67
TNPO1-204ENST00000506351 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
TNPO1-204ENST00000506351 MAPKBP1O60336 1514 aa10.83□□□□□ -0.68
TNPO1-204ENST00000506351 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
TNPO1-204ENST00000506351 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
TNPO1-204ENST00000506351 ADCY10Q96PN6 1610 aa10.82□□□□□ -0.68
TNPO1-204ENST00000506351 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
TNPO1-204ENST00000506351 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
TNPO1-204ENST00000506351 ABCA8O94911 1581 aa10.79□□□□□ -0.68
TNPO1-204ENST00000506351 SHROOM2Q13796 1616 aa10.79□□□□□ -0.68
TNPO1-204ENST00000506351 FBLN2P98095 1184 aa10.79□□□□□ -0.68
TNPO1-204ENST00000506351 PTPRKQ15262 1439 aa10.78□□□□□ -0.68
TNPO1-204ENST00000506351 PLB1Q6P1J6 1458 aa10.78□□□□□ -0.68
TNPO1-204ENST00000506351 HFM1A2PYH4 1435 aa10.77□□□□□ -0.69
TNPO1-204ENST00000506351 MIA2Q96PC5 1412 aa10.77□□□□□ -0.69
TNPO1-204ENST00000506351 KIF14Q15058 1648 aa10.76□□□□□ -0.69
TNPO1-204ENST00000506351 DNMT1P26358 1616 aaKnown RBP10.75□□□□□ -0.69
TNPO1-204ENST00000506351 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
TNPO1-204ENST00000506351 JPH4Q96JJ6 628 aa10.74□□□□□ -0.69
TNPO1-204ENST00000506351 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
TNPO1-204ENST00000506351 CDC42BPAQ5VT25 1732 aa10.74□□□□□ -0.69
TNPO1-204ENST00000506351 ARID3CA6NKF2 412 aa10.74□□□□□ -0.69
TNPO1-204ENST00000506351 TROQ12816 1431 aaPredicted RBP10.73□□□□□ -0.69
TNPO1-204ENST00000506351 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
TNPO1-204ENST00000506351 NAIPQ13075 1403 aa10.73□□□□□ -0.69
TNPO1-204ENST00000506351 AKNAQ7Z591 1439 aa10.73□□□□□ -0.69
TNPO1-204ENST00000506351 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.69
TNPO1-204ENST00000506351 PRG4Q92954 1404 aaPredicted RBP10.71□□□□□ -0.7
TNPO1-204ENST00000506351 KDM6BO15054 1643 aa10.7□□□□□ -0.7
TNPO1-204ENST00000506351 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
TNPO1-204ENST00000506351 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
TNPO1-204ENST00000506351 CDK11AQ9UQ88 783 aaPredicted RBP10.68□□□□□ -0.7
TNPO1-204ENST00000506351 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
TNPO1-204ENST00000506351 DAPK1P53355 1430 aa10.68□□□□□ -0.7
TNPO1-204ENST00000506351 ATP10BO94823 1461 aa10.68□□□□□ -0.7
TNPO1-204ENST00000506351 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
TNPO1-204ENST00000506351 GPATCH8Q9UKJ3 1502 aaKnown RBP10.66□□□□□ -0.7
TNPO1-204ENST00000506351 ABCC10Q5T3U5 1492 aa10.66□□□□□ -0.7
TNPO1-204ENST00000506351 ABCC5O15440 1437 aa10.65□□□□□ -0.7
TNPO1-204ENST00000506351 PTPRGP23470 1445 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms