RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 SNAPC4Q5SXM2 1469 aa28.96■■■□□ 2.23
SMN1-205ENST00000506239 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
SMN1-205ENST00000506239 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
SMN1-205ENST00000506239 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
SMN1-205ENST00000506239 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
SMN1-205ENST00000506239 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
SMN1-205ENST00000506239 SAMD9Q5K651 1589 aa28.8■■■□□ 2.2
SMN1-205ENST00000506239 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
SMN1-205ENST00000506239 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
SMN1-205ENST00000506239 APLP2Q06481 763 aa28.72■■■□□ 2.19
SMN1-205ENST00000506239 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
SMN1-205ENST00000506239 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
SMN1-205ENST00000506239 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
SMN1-205ENST00000506239 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
SMN1-205ENST00000506239 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
SMN1-205ENST00000506239 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
SMN1-205ENST00000506239 NUP160Q12769 1436 aa28.64■■■□□ 2.18
SMN1-205ENST00000506239 FMN1Q68DA7 1419 aa28.64■■■□□ 2.18
SMN1-205ENST00000506239 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
SMN1-205ENST00000506239 PCF11O94913 1555 aaKnown RBP28.62■■■□□ 2.17
SMN1-205ENST00000506239 FYCO1Q9BQS8 1478 aa28.6■■■□□ 2.17
SMN1-205ENST00000506239 CASKIN1Q8WXD9 1431 aa28.59■■■□□ 2.17
SMN1-205ENST00000506239 TIAM1Q13009 1591 aa28.55■■■□□ 2.16
SMN1-205ENST00000506239 FBLN2P98095 1184 aa28.54■■■□□ 2.16
SMN1-205ENST00000506239 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
SMN1-205ENST00000506239 CFAP43Q8NDM7 1665 aa28.51■■■□□ 2.15
SMN1-205ENST00000506239 DISP1Q96F81 1524 aa28.49■■■□□ 2.15
SMN1-205ENST00000506239 KIAA0556O60303 1618 aa28.49■■■□□ 2.15
SMN1-205ENST00000506239 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
SMN1-205ENST00000506239 CHD1O14646 1710 aa28.46■■■□□ 2.15
SMN1-205ENST00000506239 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
SMN1-205ENST00000506239 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
SMN1-205ENST00000506239 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
SMN1-205ENST00000506239 HECW1Q76N89 1606 aa28.33■■■□□ 2.13
SMN1-205ENST00000506239 LRRIQ1Q96JM4 1722 aa28.33■■■□□ 2.13
SMN1-205ENST00000506239 ATP1B4Q9UN42 357 aaPredicted RBP28.31■■■□□ 2.12
SMN1-205ENST00000506239 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
SMN1-205ENST00000506239 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.11
SMN1-205ENST00000506239 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
SMN1-205ENST00000506239 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
SMN1-205ENST00000506239 EPRSP07814 1512 aaKnown RBP28.21■■■□□ 2.11
SMN1-205ENST00000506239 CLASP1Q7Z460 1538 aa28.19■■■□□ 2.1
SMN1-205ENST00000506239 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
SMN1-205ENST00000506239 HRCP23327 699 aa28.18■■■□□ 2.1
SMN1-205ENST00000506239 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
SMN1-205ENST00000506239 MTUS2Q5JR59 1369 aa28.15■■■□□ 2.1
SMN1-205ENST00000506239 NUP153P49790 1475 aaKnown RBP28.14■■■□□ 2.1
SMN1-205ENST00000506239 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
SMN1-205ENST00000506239 CCNB3Q8WWL7 1395 aa28.12■■■□□ 2.09
SMN1-205ENST00000506239 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
SMN1-205ENST00000506239 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
SMN1-205ENST00000506239 PLB1Q6P1J6 1458 aa28.09■■■□□ 2.09
SMN1-205ENST00000506239 ABCA8O94911 1581 aa28.09■■■□□ 2.09
SMN1-205ENST00000506239 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
SMN1-205ENST00000506239 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
SMN1-205ENST00000506239 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
SMN1-205ENST00000506239 PTPRGP23470 1445 aa28.02■■■□□ 2.08
SMN1-205ENST00000506239 HNRNPUL2Q1KMD3 747 aaKnown RBP27.99■■■□□ 2.07
SMN1-205ENST00000506239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMN1-205ENST00000506239 ERCC6L2Q5T890 1561 aa27.96■■■□□ 2.07
SMN1-205ENST00000506239 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
SMN1-205ENST00000506239 MYOM3Q5VTT5 1437 aa27.94■■■□□ 2.06
SMN1-205ENST00000506239 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
SMN1-205ENST00000506239 ARID3CA6NKF2 412 aa27.9■■■□□ 2.06
SMN1-205ENST00000506239 UACAQ9BZF9 1416 aa27.89■■■□□ 2.05
SMN1-205ENST00000506239 TROQ12816 1431 aaPredicted RBP27.88■■■□□ 2.05
SMN1-205ENST00000506239 ATP10BO94823 1461 aa27.87■■■□□ 2.05
SMN1-205ENST00000506239 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
SMN1-205ENST00000506239 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
SMN1-205ENST00000506239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
SMN1-205ENST00000506239 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
SMN1-205ENST00000506239 FAM50AQ14320 339 aaKnown RBP27.81■■■□□ 2.04
SMN1-205ENST00000506239 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
SMN1-205ENST00000506239 MIA2Q96PC5 1412 aa27.81■■■□□ 2.04
SMN1-205ENST00000506239 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
SMN1-205ENST00000506239 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
SMN1-205ENST00000506239 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
SMN1-205ENST00000506239 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
SMN1-205ENST00000506239 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
SMN1-205ENST00000506239 KIF14Q15058 1648 aa27.72■■■□□ 2.03
SMN1-205ENST00000506239 ITGAEP38570 1179 aa27.71■■■□□ 2.03
SMN1-205ENST00000506239 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
SMN1-205ENST00000506239 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
SMN1-205ENST00000506239 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
SMN1-205ENST00000506239 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
SMN1-205ENST00000506239 SETD5Q9C0A6 1442 aa27.63■■■□□ 2.01
SMN1-205ENST00000506239 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
SMN1-205ENST00000506239 PTPRKQ15262 1439 aa27.6■■■□□ 2.01
SMN1-205ENST00000506239 RAB3GAP2Q9H2M9 1393 aa27.58■■■□□ 2.01
SMN1-205ENST00000506239 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
SMN1-205ENST00000506239 HFM1A2PYH4 1435 aa27.54■■■□□ 2
SMN1-205ENST00000506239 DHX57Q6P158 1386 aaKnown RBP27.53■■■□□ 2
SMN1-205ENST00000506239 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
SMN1-205ENST00000506239 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
SMN1-205ENST00000506239 CAMSAP2Q08AD1 1489 aa27.51■■■□□ 2
SMN1-205ENST00000506239 AKNAQ7Z591 1439 aa27.51■■□□□ 1.99
SMN1-205ENST00000506239 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
SMN1-205ENST00000506239 DAPK1P53355 1430 aa27.48■■□□□ 1.99
SMN1-205ENST00000506239 PREX2Q70Z35 1606 aa27.46■■□□□ 1.99
SMN1-205ENST00000506239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms