RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
BRIX1-202ENST00000506023 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
BRIX1-202ENST00000506023 PRG4Q92954 1404 aaPredicted RBP18.69■□□□□ 0.58
BRIX1-202ENST00000506023 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
BRIX1-202ENST00000506023 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
BRIX1-202ENST00000506023 DIP2BQ9P265 1576 aa18.59■□□□□ 0.57
BRIX1-202ENST00000506023 MAPKBP1O60336 1514 aa18.56■□□□□ 0.56
BRIX1-202ENST00000506023 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
BRIX1-202ENST00000506023 TSPOAP1O95153 1857 aa18.52■□□□□ 0.56
BRIX1-202ENST00000506023 CUL7Q14999 1698 aa18.52■□□□□ 0.56
BRIX1-202ENST00000506023 IGF1RP08069 1367 aa18.51■□□□□ 0.55
BRIX1-202ENST00000506023 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
BRIX1-202ENST00000506023 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
BRIX1-202ENST00000506023 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
BRIX1-202ENST00000506023 KDM6BO15054 1643 aa18.42■□□□□ 0.54
BRIX1-202ENST00000506023 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
BRIX1-202ENST00000506023 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
BRIX1-202ENST00000506023 NPM1P06748 294 aaKnown RBP eCLIP18.34■□□□□ 0.53
BRIX1-202ENST00000506023 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
BRIX1-202ENST00000506023 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
BRIX1-202ENST00000506023 PTPRGP23470 1445 aa18.32■□□□□ 0.52
BRIX1-202ENST00000506023 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
BRIX1-202ENST00000506023 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
BRIX1-202ENST00000506023 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
BRIX1-202ENST00000506023 FOXD1Q16676 465 aa18.28■□□□□ 0.52
BRIX1-202ENST00000506023 GLI2P10070 1586 aa18.28■□□□□ 0.52
BRIX1-202ENST00000506023 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
BRIX1-202ENST00000506023 ASXL2Q76L83 1435 aa18.27■□□□□ 0.52
BRIX1-202ENST00000506023 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
BRIX1-202ENST00000506023 ZCCHC11Q5TAX3 1644 aaKnown RBP18.24■□□□□ 0.51
BRIX1-202ENST00000506023 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
BRIX1-202ENST00000506023 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
BRIX1-202ENST00000506023 KIAA0556O60303 1618 aa18.23■□□□□ 0.51
BRIX1-202ENST00000506023 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
BRIX1-202ENST00000506023 UGGT2Q9NYU1 1516 aa18.22■□□□□ 0.51
BRIX1-202ENST00000506023 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
BRIX1-202ENST00000506023 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
BRIX1-202ENST00000506023 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
BRIX1-202ENST00000506023 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
BRIX1-202ENST00000506023 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
BRIX1-202ENST00000506023 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
BRIX1-202ENST00000506023 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
BRIX1-202ENST00000506023 ABCA8O94911 1581 aa18.07■□□□□ 0.48
BRIX1-202ENST00000506023 WDR7Q9Y4E6 1490 aa18.06■□□□□ 0.48
BRIX1-202ENST00000506023 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
BRIX1-202ENST00000506023 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
BRIX1-202ENST00000506023 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
BRIX1-202ENST00000506023 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
BRIX1-202ENST00000506023 KIF21BO75037 1637 aa17.97■□□□□ 0.47
BRIX1-202ENST00000506023 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.47
BRIX1-202ENST00000506023 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
BRIX1-202ENST00000506023 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
BRIX1-202ENST00000506023 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
BRIX1-202ENST00000506023 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
BRIX1-202ENST00000506023 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
BRIX1-202ENST00000506023 ATP10BO94823 1461 aa17.87■□□□□ 0.45
BRIX1-202ENST00000506023 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
BRIX1-202ENST00000506023 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
BRIX1-202ENST00000506023 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.45
BRIX1-202ENST00000506023 ARAP3Q8WWN8 1544 aa17.83■□□□□ 0.45
BRIX1-202ENST00000506023 P3H3Q8IVL6 736 aa17.83■□□□□ 0.44
BRIX1-202ENST00000506023 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
BRIX1-202ENST00000506023 ADAMTSL3P82987 1691 aa17.81■□□□□ 0.44
BRIX1-202ENST00000506023 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
BRIX1-202ENST00000506023 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
BRIX1-202ENST00000506023 BCORL1Q5H9F3 1711 aa17.74■□□□□ 0.43
BRIX1-202ENST00000506023 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
BRIX1-202ENST00000506023 RICTORQ6R327 1708 aa17.72■□□□□ 0.43
BRIX1-202ENST00000506023 RAPGEF3O95398 923 aa17.71■□□□□ 0.43
BRIX1-202ENST00000506023 PTPRMP28827 1452 aa17.7■□□□□ 0.42
BRIX1-202ENST00000506023 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
BRIX1-202ENST00000506023 NEO1Q92859 1461 aa17.69■□□□□ 0.42
BRIX1-202ENST00000506023 TTC37Q6PGP7 1564 aa17.67■□□□□ 0.42
BRIX1-202ENST00000506023 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
BRIX1-202ENST00000506023 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
BRIX1-202ENST00000506023 RIMS1Q86UR5 1692 aaKnown RBP17.65■□□□□ 0.42
BRIX1-202ENST00000506023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
BRIX1-202ENST00000506023 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
BRIX1-202ENST00000506023 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
BRIX1-202ENST00000506023 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
BRIX1-202ENST00000506023 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
BRIX1-202ENST00000506023 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
BRIX1-202ENST00000506023 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
BRIX1-202ENST00000506023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
BRIX1-202ENST00000506023 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
BRIX1-202ENST00000506023 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
BRIX1-202ENST00000506023 CFAP74Q9C0B2 1584 aa17.56■□□□□ 0.4
BRIX1-202ENST00000506023 FANCAO15360 1455 aa17.56■□□□□ 0.4
BRIX1-202ENST00000506023 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
BRIX1-202ENST00000506023 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
BRIX1-202ENST00000506023 EFCAB5A4FU69 1503 aa17.55■□□□□ 0.4
BRIX1-202ENST00000506023 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
BRIX1-202ENST00000506023 EEA1Q15075 1411 aa17.54■□□□□ 0.4
BRIX1-202ENST00000506023 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
BRIX1-202ENST00000506023 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
BRIX1-202ENST00000506023 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
BRIX1-202ENST00000506023 ZFYVE16Q7Z3T8 1539 aa17.51■□□□□ 0.39
BRIX1-202ENST00000506023 KIF14Q15058 1648 aa17.5■□□□□ 0.39
BRIX1-202ENST00000506023 ARID4BQ4LE39 1312 aaPredicted RBP17.49■□□□□ 0.39
BRIX1-202ENST00000506023 MYO5CQ9NQX4 1742 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms