RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
CPNE4-206ENST00000505957 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.57
CPNE4-206ENST00000505957 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
CPNE4-206ENST00000505957 FAM69CQ0P6D2 419 aa18.62■□□□□ 0.57
CPNE4-206ENST00000505957 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
CPNE4-206ENST00000505957 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
CPNE4-206ENST00000505957 IGF1RP08069 1367 aa18.56■□□□□ 0.56
CPNE4-206ENST00000505957 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.56
CPNE4-206ENST00000505957 DIP2BQ9P265 1576 aa18.52■□□□□ 0.56
CPNE4-206ENST00000505957 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
CPNE4-206ENST00000505957 CUL7Q14999 1698 aa18.47■□□□□ 0.55
CPNE4-206ENST00000505957 PTPRGP23470 1445 aa18.45■□□□□ 0.54
CPNE4-206ENST00000505957 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
CPNE4-206ENST00000505957 KDM6BO15054 1643 aa18.41■□□□□ 0.54
CPNE4-206ENST00000505957 KDM4FA0A1W2PPD8 638 aa18.4■□□□□ 0.54
CPNE4-206ENST00000505957 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
CPNE4-206ENST00000505957 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
CPNE4-206ENST00000505957 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
CPNE4-206ENST00000505957 PLB1Q6P1J6 1458 aa18.35■□□□□ 0.53
CPNE4-206ENST00000505957 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.53
CPNE4-206ENST00000505957 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
CPNE4-206ENST00000505957 GLI2P10070 1586 aa18.32■□□□□ 0.52
CPNE4-206ENST00000505957 TSPOAP1O95153 1857 aa18.32■□□□□ 0.52
CPNE4-206ENST00000505957 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
CPNE4-206ENST00000505957 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
CPNE4-206ENST00000505957 UACAQ9BZF9 1416 aa18.3■□□□□ 0.52
CPNE4-206ENST00000505957 DISP1Q96F81 1524 aa18.27■□□□□ 0.51
CPNE4-206ENST00000505957 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
CPNE4-206ENST00000505957 PPRC1Q5VV67 1664 aaKnown RBP18.23■□□□□ 0.51
CPNE4-206ENST00000505957 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
CPNE4-206ENST00000505957 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
CPNE4-206ENST00000505957 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
CPNE4-206ENST00000505957 COL17A1Q9UMD9 1497 aaPredicted RBP18.19■□□□□ 0.5
CPNE4-206ENST00000505957 TEX14Q8IWB6 1497 aa18.18■□□□□ 0.5
CPNE4-206ENST00000505957 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
CPNE4-206ENST00000505957 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
CPNE4-206ENST00000505957 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
CPNE4-206ENST00000505957 ZCCHC11Q5TAX3 1644 aaKnown RBP18.12■□□□□ 0.49
CPNE4-206ENST00000505957 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
CPNE4-206ENST00000505957 ILDR1Q86SU0 546 aaPredicted RBP18.08■□□□□ 0.48
CPNE4-206ENST00000505957 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
CPNE4-206ENST00000505957 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
CPNE4-206ENST00000505957 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
CPNE4-206ENST00000505957 ABCA8O94911 1581 aa18.01■□□□□ 0.47
CPNE4-206ENST00000505957 KCNH8Q96L42 1107 aa18■□□□□ 0.47
CPNE4-206ENST00000505957 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
CPNE4-206ENST00000505957 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
CPNE4-206ENST00000505957 HECW2Q9P2P5 1572 aa17.97■□□□□ 0.47
CPNE4-206ENST00000505957 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
CPNE4-206ENST00000505957 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
CPNE4-206ENST00000505957 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
CPNE4-206ENST00000505957 ARAP3Q8WWN8 1544 aa17.92■□□□□ 0.46
CPNE4-206ENST00000505957 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
CPNE4-206ENST00000505957 ATP10BO94823 1461 aa17.88■□□□□ 0.45
CPNE4-206ENST00000505957 P3H3Q8IVL6 736 aa17.83■□□□□ 0.44
CPNE4-206ENST00000505957 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
CPNE4-206ENST00000505957 KIF21BO75037 1637 aa17.81■□□□□ 0.44
CPNE4-206ENST00000505957 ABCA9Q8IUA7 1624 aa17.81■□□□□ 0.44
CPNE4-206ENST00000505957 NEO1Q92859 1461 aa17.8■□□□□ 0.44
CPNE4-206ENST00000505957 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
CPNE4-206ENST00000505957 RAPGEF3O95398 923 aa17.77■□□□□ 0.44
CPNE4-206ENST00000505957 SAMD9Q5K651 1589 aa17.77■□□□□ 0.44
CPNE4-206ENST00000505957 PTPRMP28827 1452 aa17.76■□□□□ 0.43
CPNE4-206ENST00000505957 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
CPNE4-206ENST00000505957 RAPGEF6Q8TEU7 1601 aa17.74■□□□□ 0.43
CPNE4-206ENST00000505957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
CPNE4-206ENST00000505957 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CPNE4-206ENST00000505957 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
CPNE4-206ENST00000505957 NUP153P49790 1475 aaKnown RBP17.71■□□□□ 0.43
CPNE4-206ENST00000505957 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
CPNE4-206ENST00000505957 FRMPD1Q5SYB0 1578 aa17.68■□□□□ 0.42
CPNE4-206ENST00000505957 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
CPNE4-206ENST00000505957 EEA1Q15075 1411 aa17.67■□□□□ 0.42
CPNE4-206ENST00000505957 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
CPNE4-206ENST00000505957 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
CPNE4-206ENST00000505957 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.42
CPNE4-206ENST00000505957 AKNAQ7Z591 1439 aa17.64■□□□□ 0.42
CPNE4-206ENST00000505957 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
CPNE4-206ENST00000505957 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
CPNE4-206ENST00000505957 MADDQ8WXG6 1647 aa17.62■□□□□ 0.41
CPNE4-206ENST00000505957 FANCAO15360 1455 aa17.61■□□□□ 0.41
CPNE4-206ENST00000505957 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
CPNE4-206ENST00000505957 RANGAP1P46060 587 aaPredicted RBP17.59■□□□□ 0.41
CPNE4-206ENST00000505957 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
CPNE4-206ENST00000505957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.41
CPNE4-206ENST00000505957 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.41
CPNE4-206ENST00000505957 RICTORQ6R327 1708 aa17.58■□□□□ 0.4
CPNE4-206ENST00000505957 MAGI2Q86UL8 1455 aa17.57■□□□□ 0.4
CPNE4-206ENST00000505957 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
CPNE4-206ENST00000505957 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
CPNE4-206ENST00000505957 ZFYVE16Q7Z3T8 1539 aa17.53■□□□□ 0.4
CPNE4-206ENST00000505957 RIMS1Q86UR5 1692 aaKnown RBP17.53■□□□□ 0.4
CPNE4-206ENST00000505957 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
CPNE4-206ENST00000505957 PLCH2O75038 1416 aa17.52■□□□□ 0.4
CPNE4-206ENST00000505957 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.39
CPNE4-206ENST00000505957 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
CPNE4-206ENST00000505957 HSPA2P54652 639 aa17.49■□□□□ 0.39
CPNE4-206ENST00000505957 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
CPNE4-206ENST00000505957 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
CPNE4-206ENST00000505957 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms