RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
DDR1-257ENST00000505534 NPM1P06748 294 aaKnown RBP eCLIP29.98■■■□□ 2.39
DDR1-257ENST00000505534 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
DDR1-257ENST00000505534 FAM69CQ0P6D2 419 aa29.93■■■□□ 2.38
DDR1-257ENST00000505534 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
DDR1-257ENST00000505534 KIAA0586Q9BVV6 1533 aa29.87■■■□□ 2.37
DDR1-257ENST00000505534 ADCY10Q96PN6 1610 aa29.87■■■□□ 2.37
DDR1-257ENST00000505534 IGF1RP08069 1367 aa29.84■■■□□ 2.37
DDR1-257ENST00000505534 DIP2BQ9P265 1576 aa29.83■■■□□ 2.37
DDR1-257ENST00000505534 KIF27Q86VH2 1401 aa29.81■■■□□ 2.36
DDR1-257ENST00000505534 CUL7Q14999 1698 aa29.81■■■□□ 2.36
DDR1-257ENST00000505534 TSPOAP1O95153 1857 aa29.7■■■□□ 2.35
DDR1-257ENST00000505534 KDM6BO15054 1643 aa29.67■■■□□ 2.34
DDR1-257ENST00000505534 PTPRGP23470 1445 aa29.67■■■□□ 2.34
DDR1-257ENST00000505534 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.34
DDR1-257ENST00000505534 CARMIL2Q6F5E8 1435 aa29.6■■■□□ 2.33
DDR1-257ENST00000505534 TNIKQ9UKE5 1360 aa29.58■■■□□ 2.33
DDR1-257ENST00000505534 TTBK1Q5TCY1 1321 aaPredicted RBP29.55■■■□□ 2.32
DDR1-257ENST00000505534 KDM4FA0A1W2PPD8 638 aa29.55■■■□□ 2.32
DDR1-257ENST00000505534 ABCC2Q92887 1545 aa29.55■■■□□ 2.32
DDR1-257ENST00000505534 IQGAP2Q13576 1575 aa29.52■■■□□ 2.32
DDR1-257ENST00000505534 PLB1Q6P1J6 1458 aa29.48■■■□□ 2.31
DDR1-257ENST00000505534 ASXL2Q76L83 1435 aa29.48■■■□□ 2.31
DDR1-257ENST00000505534 UHRF1BP1LA0JNW5 1464 aa29.47■■■□□ 2.31
DDR1-257ENST00000505534 GLI2P10070 1586 aa29.46■■■□□ 2.31
DDR1-257ENST00000505534 UACAQ9BZF9 1416 aa29.43■■■□□ 2.3
DDR1-257ENST00000505534 PPRC1Q5VV67 1664 aaKnown RBP29.42■■■□□ 2.3
DDR1-257ENST00000505534 DISP1Q96F81 1524 aa29.4■■■□□ 2.3
DDR1-257ENST00000505534 UGGT2Q9NYU1 1516 aa29.33■■■□□ 2.29
DDR1-257ENST00000505534 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
DDR1-257ENST00000505534 RAPGEF2Q9Y4G8 1499 aa29.32■■■□□ 2.28
DDR1-257ENST00000505534 EPRSP07814 1512 aaKnown RBP29.3■■■□□ 2.28
DDR1-257ENST00000505534 MAP3K4Q9Y6R4 1608 aa29.28■■■□□ 2.28
DDR1-257ENST00000505534 ZCCHC11Q5TAX3 1644 aaKnown RBP29.26■■■□□ 2.27
DDR1-257ENST00000505534 KIAA0556O60303 1618 aa29.25■■■□□ 2.27
DDR1-257ENST00000505534 TEX14Q8IWB6 1497 aa29.23■■■□□ 2.27
DDR1-257ENST00000505534 COL17A1Q9UMD9 1497 aaPredicted RBP29.23■■■□□ 2.27
DDR1-257ENST00000505534 ADGRL1O94910 1474 aa29.21■■■□□ 2.27
DDR1-257ENST00000505534 WDR7Q9Y4E6 1490 aa29.13■■■□□ 2.25
DDR1-257ENST00000505534 CTTNBP2Q8WZ74 1663 aa29.12■■■□□ 2.25
DDR1-257ENST00000505534 GOLGA3Q08378 1498 aa29.07■■■□□ 2.24
DDR1-257ENST00000505534 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
DDR1-257ENST00000505534 ABCA8O94911 1581 aa29.01■■■□□ 2.24
DDR1-257ENST00000505534 MAGI3Q5TCQ9 1506 aa29.01■■■□□ 2.23
DDR1-257ENST00000505534 ILDR1Q86SU0 546 aaPredicted RBP29.01■■■□□ 2.23
DDR1-257ENST00000505534 CD109Q6YHK3 1445 aa29.01■■■□□ 2.23
DDR1-257ENST00000505534 KCNH8Q96L42 1107 aa28.98■■■□□ 2.23
DDR1-257ENST00000505534 HECW2Q9P2P5 1572 aa28.92■■■□□ 2.22
DDR1-257ENST00000505534 PRXQ9BXM0 1461 aa28.92■■■□□ 2.22
DDR1-257ENST00000505534 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
DDR1-257ENST00000505534 ARAP3Q8WWN8 1544 aa28.79■■■□□ 2.2
DDR1-257ENST00000505534 ATP10BO94823 1461 aa28.78■■■□□ 2.2
DDR1-257ENST00000505534 KIF21BO75037 1637 aa28.77■■■□□ 2.2
DDR1-257ENST00000505534 P3H3Q8IVL6 736 aa28.75■■■□□ 2.19
DDR1-257ENST00000505534 ARID3CA6NKF2 412 aa28.74■■■□□ 2.19
DDR1-257ENST00000505534 PHLDB1Q86UU1 1377 aa28.73■■■□□ 2.19
DDR1-257ENST00000505534 ABCA9Q8IUA7 1624 aa28.71■■■□□ 2.19
DDR1-257ENST00000505534 SAMD9Q5K651 1589 aa28.66■■■□□ 2.18
DDR1-257ENST00000505534 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
DDR1-257ENST00000505534 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
DDR1-257ENST00000505534 NEO1Q92859 1461 aa28.61■■■□□ 2.17
DDR1-257ENST00000505534 ADAMTSL3P82987 1691 aa28.59■■■□□ 2.17
DDR1-257ENST00000505534 RAPGEF3O95398 923 aa28.59■■■□□ 2.17
DDR1-257ENST00000505534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
DDR1-257ENST00000505534 HNRNPUL2Q1KMD3 747 aaKnown RBP28.58■■■□□ 2.17
DDR1-257ENST00000505534 PTPRMP28827 1452 aa28.55■■■□□ 2.16
DDR1-257ENST00000505534 NUP153P49790 1475 aaKnown RBP28.51■■■□□ 2.15
DDR1-257ENST00000505534 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
DDR1-257ENST00000505534 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
DDR1-257ENST00000505534 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
DDR1-257ENST00000505534 PLEKHD1A6NEE1 506 aa28.45■■■□□ 2.14
DDR1-257ENST00000505534 EEA1Q15075 1411 aa28.44■■■□□ 2.14
DDR1-257ENST00000505534 FHOD3Q2V2M9 1422 aa28.43■■■□□ 2.14
DDR1-257ENST00000505534 RANGAP1P46060 587 aaPredicted RBP28.43■■■□□ 2.14
DDR1-257ENST00000505534 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
DDR1-257ENST00000505534 MADDQ8WXG6 1647 aa28.42■■■□□ 2.14
DDR1-257ENST00000505534 RICTORQ6R327 1708 aa28.4■■■□□ 2.14
DDR1-257ENST00000505534 DENND4BO75064 1496 aaPredicted RBP28.4■■■□□ 2.14
DDR1-257ENST00000505534 ARHGEF40Q8TER5 1519 aa28.38■■■□□ 2.13
DDR1-257ENST00000505534 CFAP74Q9C0B2 1584 aa28.37■■■□□ 2.13
DDR1-257ENST00000505534 AKNAQ7Z591 1439 aa28.37■■■□□ 2.13
DDR1-257ENST00000505534 PCF11O94913 1555 aaKnown RBP28.35■■■□□ 2.13
DDR1-257ENST00000505534 FANCAO15360 1455 aa28.34■■■□□ 2.13
DDR1-257ENST00000505534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.33■■■□□ 2.136e-7■■■■□ 21.9
DDR1-257ENST00000505534 RIMS1Q86UR5 1692 aaKnown RBP28.32■■■□□ 2.12
DDR1-257ENST00000505534 LMTK3Q96Q04 1460 aa28.31■■■□□ 2.12
DDR1-257ENST00000505534 EFCAB5A4FU69 1503 aa28.31■■■□□ 2.12
DDR1-257ENST00000505534 TTC37Q6PGP7 1564 aa28.27■■■□□ 2.12
DDR1-257ENST00000505534 ZMYM4Q5VZL5 1548 aa28.27■■■□□ 2.12
DDR1-257ENST00000505534 POGZQ7Z3K3 1410 aa28.26■■■□□ 2.12
DDR1-257ENST00000505534 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
DDR1-257ENST00000505534 ZFYVE16Q7Z3T8 1539 aa28.23■■■□□ 2.11
DDR1-257ENST00000505534 YEATS2Q9ULM3 1422 aa28.19■■■□□ 2.1
DDR1-257ENST00000505534 CDK13Q14004 1512 aaKnown RBP28.19■■■□□ 2.1
DDR1-257ENST00000505534 SIGLEC1Q9BZZ2 1709 aa28.18■■■□□ 2.1
DDR1-257ENST00000505534 HECW1Q76N89 1606 aa28.17■■■□□ 2.1
DDR1-257ENST00000505534 PLCH2O75038 1416 aa28.17■■■□□ 2.1
DDR1-257ENST00000505534 SCAPERQ9BY12 1400 aa28.15■■■□□ 2.1
DDR1-257ENST00000505534 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
DDR1-257ENST00000505534 HSPA2P54652 639 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms