RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
PDCD6-203ENST00000505526 NPM1P06748 294 aaKnown RBP eCLIP27.29■■□□□ 1.96
PDCD6-203ENST00000505526 FAM69CQ0P6D2 419 aa27.29■■□□□ 1.96
PDCD6-203ENST00000505526 ABCC10Q5T3U5 1492 aa27.27■■□□□ 1.96
PDCD6-203ENST00000505526 MAPKBP1O60336 1514 aa27.23■■□□□ 1.95
PDCD6-203ENST00000505526 ADCY10Q96PN6 1610 aa27.2■■□□□ 1.94
PDCD6-203ENST00000505526 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
PDCD6-203ENST00000505526 KIAA0586Q9BVV6 1533 aa27.16■■□□□ 1.94
PDCD6-203ENST00000505526 IGF1RP08069 1367 aa27.13■■□□□ 1.93
PDCD6-203ENST00000505526 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
PDCD6-203ENST00000505526 CUL7Q14999 1698 aa27.07■■□□□ 1.92
PDCD6-203ENST00000505526 KDM6BO15054 1643 aa27.05■■□□□ 1.92
PDCD6-203ENST00000505526 PTPRGP23470 1445 aa27■■□□□ 1.91
PDCD6-203ENST00000505526 TSPOAP1O95153 1857 aa27■■□□□ 1.91
PDCD6-203ENST00000505526 KDM4FA0A1W2PPD8 638 aa26.97■■□□□ 1.91
PDCD6-203ENST00000505526 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
PDCD6-203ENST00000505526 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
PDCD6-203ENST00000505526 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
PDCD6-203ENST00000505526 TNIKQ9UKE5 1360 aa26.91■■□□□ 1.9
PDCD6-203ENST00000505526 ABCC2Q92887 1545 aa26.89■■□□□ 1.9
PDCD6-203ENST00000505526 ASXL2Q76L83 1435 aa26.85■■□□□ 1.89
PDCD6-203ENST00000505526 IQGAP2Q13576 1575 aa26.84■■□□□ 1.89
PDCD6-203ENST00000505526 PLB1Q6P1J6 1458 aa26.83■■□□□ 1.89
PDCD6-203ENST00000505526 GLI2P10070 1586 aa26.8■■□□□ 1.88
PDCD6-203ENST00000505526 UHRF1BP1LA0JNW5 1464 aa26.79■■□□□ 1.88
PDCD6-203ENST00000505526 UACAQ9BZF9 1416 aa26.78■■□□□ 1.88
PDCD6-203ENST00000505526 PPRC1Q5VV67 1664 aaKnown RBP26.77■■□□□ 1.88
PDCD6-203ENST00000505526 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
PDCD6-203ENST00000505526 EPRSP07814 1512 aaKnown RBP26.68■■□□□ 1.86
PDCD6-203ENST00000505526 KDM5BQ9UGL1 1544 aa26.68■■□□□ 1.86
PDCD6-203ENST00000505526 UGGT2Q9NYU1 1516 aa26.65■■□□□ 1.86
PDCD6-203ENST00000505526 ADGRL1O94910 1474 aa26.65■■□□□ 1.86
PDCD6-203ENST00000505526 COL17A1Q9UMD9 1497 aaPredicted RBP26.65■■□□□ 1.86
PDCD6-203ENST00000505526 RAPGEF2Q9Y4G8 1499 aa26.65■■□□□ 1.86
PDCD6-203ENST00000505526 MAP3K4Q9Y6R4 1608 aa26.64■■□□□ 1.86
PDCD6-203ENST00000505526 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
PDCD6-203ENST00000505526 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
PDCD6-203ENST00000505526 KIAA0556O60303 1618 aa26.59■■□□□ 1.85
PDCD6-203ENST00000505526 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
PDCD6-203ENST00000505526 WDR7Q9Y4E6 1490 aa26.51■■□□□ 1.83
PDCD6-203ENST00000505526 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
PDCD6-203ENST00000505526 GOLGA3Q08378 1498 aa26.41■■□□□ 1.82
PDCD6-203ENST00000505526 HECW2Q9P2P5 1572 aa26.41■■□□□ 1.82
PDCD6-203ENST00000505526 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
PDCD6-203ENST00000505526 CD109Q6YHK3 1445 aa26.4■■□□□ 1.82
PDCD6-203ENST00000505526 KCNH8Q96L42 1107 aa26.4■■□□□ 1.82
PDCD6-203ENST00000505526 MAGI3Q5TCQ9 1506 aa26.39■■□□□ 1.82
PDCD6-203ENST00000505526 ABCA8O94911 1581 aa26.38■■□□□ 1.81
PDCD6-203ENST00000505526 CFAP43Q8NDM7 1665 aa26.37■■□□□ 1.81
PDCD6-203ENST00000505526 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
PDCD6-203ENST00000505526 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
PDCD6-203ENST00000505526 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
PDCD6-203ENST00000505526 KIF21BO75037 1637 aa26.21■■□□□ 1.79
PDCD6-203ENST00000505526 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.78
PDCD6-203ENST00000505526 ATP10BO94823 1461 aa26.17■■□□□ 1.78
PDCD6-203ENST00000505526 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
PDCD6-203ENST00000505526 ABCA9Q8IUA7 1624 aa26.11■■□□□ 1.77
PDCD6-203ENST00000505526 PHLDB1Q86UU1 1377 aa26.11■■□□□ 1.77
PDCD6-203ENST00000505526 RAPGEF3O95398 923 aa26.05■■□□□ 1.76
PDCD6-203ENST00000505526 SAMD9Q5K651 1589 aa26.03■■□□□ 1.76
PDCD6-203ENST00000505526 PTPRMP28827 1452 aa26.02■■□□□ 1.76
PDCD6-203ENST00000505526 NEO1Q92859 1461 aa26.02■■□□□ 1.76
PDCD6-203ENST00000505526 RAPGEF6Q8TEU7 1601 aa26.02■■□□□ 1.76
PDCD6-203ENST00000505526 ADAMTSL3P82987 1691 aa26.02■■□□□ 1.76
PDCD6-203ENST00000505526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
PDCD6-203ENST00000505526 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
PDCD6-203ENST00000505526 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
PDCD6-203ENST00000505526 FBXO41Q8TF61 875 aa25.95■■□□□ 1.74
PDCD6-203ENST00000505526 FRMPD1Q5SYB0 1578 aa25.95■■□□□ 1.74
PDCD6-203ENST00000505526 NUP153P49790 1475 aaKnown RBP25.94■■□□□ 1.74
PDCD6-203ENST00000505526 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
PDCD6-203ENST00000505526 BCORL1Q5H9F3 1711 aa25.93■■□□□ 1.74
PDCD6-203ENST00000505526 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
PDCD6-203ENST00000505526 MADDQ8WXG6 1647 aa25.89■■□□□ 1.73
PDCD6-203ENST00000505526 FHOD3Q2V2M9 1422 aa25.86■■□□□ 1.73
PDCD6-203ENST00000505526 PLEKHD1A6NEE1 506 aa25.85■■□□□ 1.73
PDCD6-203ENST00000505526 PCF11O94913 1555 aaKnown RBP25.85■■□□□ 1.73
PDCD6-203ENST00000505526 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
PDCD6-203ENST00000505526 ARHGEF40Q8TER5 1519 aa25.84■■□□□ 1.73
PDCD6-203ENST00000505526 AKNAQ7Z591 1439 aa25.82■■□□□ 1.72
PDCD6-203ENST00000505526 LMTK3Q96Q04 1460 aa25.82■■□□□ 1.72
PDCD6-203ENST00000505526 RICTORQ6R327 1708 aa25.81■■□□□ 1.72
PDCD6-203ENST00000505526 FANCAO15360 1455 aa25.8■■□□□ 1.72
PDCD6-203ENST00000505526 EEA1Q15075 1411 aa25.79■■□□□ 1.72
PDCD6-203ENST00000505526 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
PDCD6-203ENST00000505526 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
PDCD6-203ENST00000505526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.78■■□□□ 1.722e-6■■■■■ 26.8
PDCD6-203ENST00000505526 POGZQ7Z3K3 1410 aa25.72■■□□□ 1.71
PDCD6-203ENST00000505526 TTC37Q6PGP7 1564 aa25.72■■□□□ 1.71
PDCD6-203ENST00000505526 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
PDCD6-203ENST00000505526 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.7
PDCD6-203ENST00000505526 ZFYVE16Q7Z3T8 1539 aa25.7■■□□□ 1.7
PDCD6-203ENST00000505526 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
PDCD6-203ENST00000505526 YEATS2Q9ULM3 1422 aa25.69■■□□□ 1.7
PDCD6-203ENST00000505526 HSPA2P54652 639 aa25.69■■□□□ 1.7
PDCD6-203ENST00000505526 MAGI2Q86UL8 1455 aa25.67■■□□□ 1.7
PDCD6-203ENST00000505526 SIGLEC1Q9BZZ2 1709 aa25.67■■□□□ 1.7
PDCD6-203ENST00000505526 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
PDCD6-203ENST00000505526 HECW1Q76N89 1606 aa25.64■■□□□ 1.69
PDCD6-203ENST00000505526 MLECQ14165 292 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms