RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
CTSB-205ENST00000505496 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
CTSB-205ENST00000505496 JPH4Q96JJ6 628 aa14.69□□□□□ -0.06
CTSB-205ENST00000505496 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
CTSB-205ENST00000505496 EEA1Q15075 1411 aa14.67□□□□□ -0.06
CTSB-205ENST00000505496 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
CTSB-205ENST00000505496 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
CTSB-205ENST00000505496 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
CTSB-205ENST00000505496 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
CTSB-205ENST00000505496 UGGT2Q9NYU1 1516 aa14.55□□□□□ -0.08
CTSB-205ENST00000505496 DISP1Q96F81 1524 aa14.52□□□□□ -0.08
CTSB-205ENST00000505496 CARMIL2Q6F5E8 1435 aa14.52□□□□□ -0.08
CTSB-205ENST00000505496 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
CTSB-205ENST00000505496 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
CTSB-205ENST00000505496 KIF21BO75037 1637 aa14.48□□□□□ -0.09
CTSB-205ENST00000505496 PTPRGP23470 1445 aa14.48□□□□□ -0.09
CTSB-205ENST00000505496 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.09
CTSB-205ENST00000505496 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
CTSB-205ENST00000505496 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
CTSB-205ENST00000505496 ADCY10Q96PN6 1610 aa14.41□□□□□ -0.1
CTSB-205ENST00000505496 UHRF1BP1LA0JNW5 1464 aa14.4□□□□□ -0.1
CTSB-205ENST00000505496 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
CTSB-205ENST00000505496 SAMD9Q5K651 1589 aa14.37□□□□□ -0.11
CTSB-205ENST00000505496 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
CTSB-205ENST00000505496 ABCC2Q92887 1545 aa14.36□□□□□ -0.11
CTSB-205ENST00000505496 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTSB-205ENST00000505496 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
CTSB-205ENST00000505496 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
CTSB-205ENST00000505496 UBTFP17480 764 aaKnown RBP14.33□□□□□ -0.12
CTSB-205ENST00000505496 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
CTSB-205ENST00000505496 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
CTSB-205ENST00000505496 ABCA8O94911 1581 aa14.31□□□□□ -0.12
CTSB-205ENST00000505496 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
CTSB-205ENST00000505496 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
CTSB-205ENST00000505496 ABCC10Q5T3U5 1492 aa14.29□□□□□ -0.12
CTSB-205ENST00000505496 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
CTSB-205ENST00000505496 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
CTSB-205ENST00000505496 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
CTSB-205ENST00000505496 RANGAP1P46060 587 aaPredicted RBP14.25□□□□□ -0.13
CTSB-205ENST00000505496 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
CTSB-205ENST00000505496 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
CTSB-205ENST00000505496 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
CTSB-205ENST00000505496 ZCCHC11Q5TAX3 1644 aaKnown RBP14.22□□□□□ -0.13
CTSB-205ENST00000505496 ATP10BO94823 1461 aa14.2□□□□□ -0.14
CTSB-205ENST00000505496 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
CTSB-205ENST00000505496 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
CTSB-205ENST00000505496 KIF13AQ9H1H9 1805 aa14.19□□□□□ -0.14
CTSB-205ENST00000505496 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
CTSB-205ENST00000505496 GLI2P10070 1586 aa14.18□□□□□ -0.14
CTSB-205ENST00000505496 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
CTSB-205ENST00000505496 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
CTSB-205ENST00000505496 CLIP1P30622 1438 aa14.15□□□□□ -0.14
CTSB-205ENST00000505496 ARID3CA6NKF2 412 aa14.11□□□□□ -0.15
CTSB-205ENST00000505496 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
CTSB-205ENST00000505496 CEP162Q5TB80 1403 aa14.08□□□□□ -0.15
CTSB-205ENST00000505496 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.15
CTSB-205ENST00000505496 MAP3K4Q9Y6R4 1608 aa14.08□□□□□ -0.16
CTSB-205ENST00000505496 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
CTSB-205ENST00000505496 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
CTSB-205ENST00000505496 PLEKHD1A6NEE1 506 aa14.06□□□□□ -0.16
CTSB-205ENST00000505496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
CTSB-205ENST00000505496 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
CTSB-205ENST00000505496 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
CTSB-205ENST00000505496 MAGI3Q5TCQ9 1506 aa14.05□□□□□ -0.16
CTSB-205ENST00000505496 PPRC1Q5VV67 1664 aaKnown RBP14.05□□□□□ -0.16
CTSB-205ENST00000505496 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
CTSB-205ENST00000505496 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
CTSB-205ENST00000505496 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
CTSB-205ENST00000505496 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.16
CTSB-205ENST00000505496 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
CTSB-205ENST00000505496 PCF11O94913 1555 aaKnown RBP14.02□□□□□ -0.16
CTSB-205ENST00000505496 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
CTSB-205ENST00000505496 CCDC18Q5T9S5 1454 aa14□□□□□ -0.17
CTSB-205ENST00000505496 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
CTSB-205ENST00000505496 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
CTSB-205ENST00000505496 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
CTSB-205ENST00000505496 TROQ12816 1431 aaPredicted RBP13.98□□□□□ -0.17
CTSB-205ENST00000505496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■□□□□ 9.5
CTSB-205ENST00000505496 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.17
CTSB-205ENST00000505496 LRRIQ1Q96JM4 1722 aa13.96□□□□□ -0.17
CTSB-205ENST00000505496 KDM6BO15054 1643 aa13.96□□□□□ -0.17
CTSB-205ENST00000505496 NEO1Q92859 1461 aa13.93□□□□□ -0.18
CTSB-205ENST00000505496 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
CTSB-205ENST00000505496 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
CTSB-205ENST00000505496 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
CTSB-205ENST00000505496 PLCH2O75038 1416 aa13.92□□□□□ -0.18
CTSB-205ENST00000505496 KIF14Q15058 1648 aa13.89□□□□□ -0.19
CTSB-205ENST00000505496 FANCAO15360 1455 aa13.88□□□□□ -0.19
CTSB-205ENST00000505496 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
CTSB-205ENST00000505496 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
CTSB-205ENST00000505496 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
CTSB-205ENST00000505496 MAP3K1Q13233 1512 aa13.84□□□□□ -0.19
CTSB-205ENST00000505496 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.19
CTSB-205ENST00000505496 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
CTSB-205ENST00000505496 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
CTSB-205ENST00000505496 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
CTSB-205ENST00000505496 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
CTSB-205ENST00000505496 TIAM1Q13009 1591 aa13.81□□□□□ -0.2
CTSB-205ENST00000505496 FRMPD1Q5SYB0 1578 aa13.8□□□□□ -0.2
CTSB-205ENST00000505496 MYO5CQ9NQX4 1742 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms