RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
COL25A1-205ENST00000505377 ABCC10Q5T3U5 1492 aa21.53■■□□□ 1.04
COL25A1-205ENST00000505377 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
COL25A1-205ENST00000505377 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
COL25A1-205ENST00000505377 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
COL25A1-205ENST00000505377 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
COL25A1-205ENST00000505377 DIP2BQ9P265 1576 aa21.45■■□□□ 1.02
COL25A1-205ENST00000505377 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
COL25A1-205ENST00000505377 IGF1RP08069 1367 aa21.42■■□□□ 1.02
COL25A1-205ENST00000505377 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.02
COL25A1-205ENST00000505377 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
COL25A1-205ENST00000505377 TSPOAP1O95153 1857 aa21.36■■□□□ 1.01
COL25A1-205ENST00000505377 KDM6BO15054 1643 aa21.34■■□□□ 1.01
COL25A1-205ENST00000505377 PTPRGP23470 1445 aa21.3■■□□□ 1
COL25A1-205ENST00000505377 KIF27Q86VH2 1401 aa21.3■■□□□ 1
COL25A1-205ENST00000505377 CUL7Q14999 1698 aa21.25■□□□□ 0.99
COL25A1-205ENST00000505377 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
COL25A1-205ENST00000505377 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
COL25A1-205ENST00000505377 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
COL25A1-205ENST00000505377 ABCC2Q92887 1545 aa21.2■□□□□ 0.98
COL25A1-205ENST00000505377 PPRC1Q5VV67 1664 aaKnown RBP21.17■□□□□ 0.98
COL25A1-205ENST00000505377 CARMIL2Q6F5E8 1435 aa21.16■□□□□ 0.98
COL25A1-205ENST00000505377 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
COL25A1-205ENST00000505377 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
COL25A1-205ENST00000505377 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
COL25A1-205ENST00000505377 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
COL25A1-205ENST00000505377 GLI2P10070 1586 aa21.11■□□□□ 0.97
COL25A1-205ENST00000505377 IQGAP2Q13576 1575 aa21.11■□□□□ 0.97
COL25A1-205ENST00000505377 DISP1Q96F81 1524 aa21.11■□□□□ 0.97
COL25A1-205ENST00000505377 UHRF1BP1LA0JNW5 1464 aa21.1■□□□□ 0.97
COL25A1-205ENST00000505377 ADGRL1O94910 1474 aa21.08■□□□□ 0.97
COL25A1-205ENST00000505377 EPRSP07814 1512 aaKnown RBP21.06■□□□□ 0.96
COL25A1-205ENST00000505377 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
COL25A1-205ENST00000505377 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
COL25A1-205ENST00000505377 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
COL25A1-205ENST00000505377 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
COL25A1-205ENST00000505377 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
COL25A1-205ENST00000505377 KIAA0556O60303 1618 aa20.95■□□□□ 0.94
COL25A1-205ENST00000505377 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
COL25A1-205ENST00000505377 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
COL25A1-205ENST00000505377 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.94
COL25A1-205ENST00000505377 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
COL25A1-205ENST00000505377 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
COL25A1-205ENST00000505377 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
COL25A1-205ENST00000505377 ABCA8O94911 1581 aa20.8■□□□□ 0.92
COL25A1-205ENST00000505377 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
COL25A1-205ENST00000505377 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
COL25A1-205ENST00000505377 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
COL25A1-205ENST00000505377 CFAP43Q8NDM7 1665 aa20.74■□□□□ 0.91
COL25A1-205ENST00000505377 P3H3Q8IVL6 736 aa20.73■□□□□ 0.91
COL25A1-205ENST00000505377 KIF21BO75037 1637 aa20.71■□□□□ 0.91
COL25A1-205ENST00000505377 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
COL25A1-205ENST00000505377 ATP10BO94823 1461 aa20.67■□□□□ 0.9
COL25A1-205ENST00000505377 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
COL25A1-205ENST00000505377 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
COL25A1-205ENST00000505377 PTPRMP28827 1452 aa20.57■□□□□ 0.88
COL25A1-205ENST00000505377 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
COL25A1-205ENST00000505377 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
COL25A1-205ENST00000505377 FBXO41Q8TF61 875 aa20.54■□□□□ 0.88
COL25A1-205ENST00000505377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
COL25A1-205ENST00000505377 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
COL25A1-205ENST00000505377 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
COL25A1-205ENST00000505377 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
COL25A1-205ENST00000505377 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
COL25A1-205ENST00000505377 FRMPD1Q5SYB0 1578 aa20.5■□□□□ 0.87
COL25A1-205ENST00000505377 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
COL25A1-205ENST00000505377 SAMD9Q5K651 1589 aa20.48■□□□□ 0.87
COL25A1-205ENST00000505377 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
COL25A1-205ENST00000505377 NEO1Q92859 1461 aa20.48■□□□□ 0.87
COL25A1-205ENST00000505377 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
COL25A1-205ENST00000505377 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
COL25A1-205ENST00000505377 MADDQ8WXG6 1647 aa20.45■□□□□ 0.87
COL25A1-205ENST00000505377 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
COL25A1-205ENST00000505377 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
COL25A1-205ENST00000505377 LMTK3Q96Q04 1460 aa20.42■□□□□ 0.86
COL25A1-205ENST00000505377 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
COL25A1-205ENST00000505377 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
COL25A1-205ENST00000505377 HSPA2P54652 639 aa20.4■□□□□ 0.86
COL25A1-205ENST00000505377 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
COL25A1-205ENST00000505377 AKNAQ7Z591 1439 aa20.37■□□□□ 0.85
COL25A1-205ENST00000505377 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
COL25A1-205ENST00000505377 RIMS1Q86UR5 1692 aaKnown RBP20.36■□□□□ 0.85
COL25A1-205ENST00000505377 ARHGEF40Q8TER5 1519 aa20.36■□□□□ 0.85
COL25A1-205ENST00000505377 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
COL25A1-205ENST00000505377 FANCAO15360 1455 aa20.33■□□□□ 0.85
COL25A1-205ENST00000505377 YEATS2Q9ULM3 1422 aa20.33■□□□□ 0.84
COL25A1-205ENST00000505377 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.84
COL25A1-205ENST00000505377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
COL25A1-205ENST00000505377 MLECQ14165 292 aa20.31■□□□□ 0.84
COL25A1-205ENST00000505377 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
COL25A1-205ENST00000505377 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
COL25A1-205ENST00000505377 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
COL25A1-205ENST00000505377 ZMYM4Q5VZL5 1548 aa20.25■□□□□ 0.83
COL25A1-205ENST00000505377 POGZQ7Z3K3 1410 aa20.23■□□□□ 0.83
COL25A1-205ENST00000505377 HECW1Q76N89 1606 aa20.23■□□□□ 0.83
COL25A1-205ENST00000505377 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
COL25A1-205ENST00000505377 CFAP74Q9C0B2 1584 aa20.21■□□□□ 0.83
COL25A1-205ENST00000505377 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
COL25A1-205ENST00000505377 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
COL25A1-205ENST00000505377 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms