RNA–Protein interactions for RNA: ENST00000504690.5

SH3TC2-206, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 5

Gene SH3TC2, Length 4,416 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-206ENST00000504690 CUX2O14529 1486 aa16.69■□□□□ 0.26
SH3TC2-206ENST00000504690 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
SH3TC2-206ENST00000504690 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
SH3TC2-206ENST00000504690 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
SH3TC2-206ENST00000504690 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
SH3TC2-206ENST00000504690 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
SH3TC2-206ENST00000504690 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
SH3TC2-206ENST00000504690 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
SH3TC2-206ENST00000504690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
SH3TC2-206ENST00000504690 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
SH3TC2-206ENST00000504690 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
SH3TC2-206ENST00000504690 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
SH3TC2-206ENST00000504690 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
SH3TC2-206ENST00000504690 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
SH3TC2-206ENST00000504690 TSPY4P0CV99 314 aa16.61■□□□□ 0.25
SH3TC2-206ENST00000504690 TSPY10P0CW01 314 aa16.61■□□□□ 0.25
SH3TC2-206ENST00000504690 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.25
SH3TC2-206ENST00000504690 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
SH3TC2-206ENST00000504690 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
SH3TC2-206ENST00000504690 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
SH3TC2-206ENST00000504690 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
SH3TC2-206ENST00000504690 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
SH3TC2-206ENST00000504690 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
SH3TC2-206ENST00000504690 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
SH3TC2-206ENST00000504690 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
SH3TC2-206ENST00000504690 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
SH3TC2-206ENST00000504690 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
SH3TC2-206ENST00000504690 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
SH3TC2-206ENST00000504690 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
SH3TC2-206ENST00000504690 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
SH3TC2-206ENST00000504690 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
SH3TC2-206ENST00000504690 NEFMP07197 916 aa16.44■□□□□ 0.22
SH3TC2-206ENST00000504690 NBR1Q14596 966 aa16.44■□□□□ 0.22
SH3TC2-206ENST00000504690 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
SH3TC2-206ENST00000504690 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
SH3TC2-206ENST00000504690 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
SH3TC2-206ENST00000504690 RAB3GAP2Q9H2M9 1393 aa16.4■□□□□ 0.22
SH3TC2-206ENST00000504690 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
SH3TC2-206ENST00000504690 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
SH3TC2-206ENST00000504690 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
SH3TC2-206ENST00000504690 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
SH3TC2-206ENST00000504690 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
SH3TC2-206ENST00000504690 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
SH3TC2-206ENST00000504690 FOXD1Q16676 465 aa16.32■□□□□ 0.2
SH3TC2-206ENST00000504690 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
SH3TC2-206ENST00000504690 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
SH3TC2-206ENST00000504690 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
SH3TC2-206ENST00000504690 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
SH3TC2-206ENST00000504690 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
SH3TC2-206ENST00000504690 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
SH3TC2-206ENST00000504690 CCER2I3L3R5 266 aa16.27■□□□□ 0.2
SH3TC2-206ENST00000504690 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.19
SH3TC2-206ENST00000504690 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.19
SH3TC2-206ENST00000504690 B4GALNT3Q6L9W6 998 aa16.27■□□□□ 0.19
SH3TC2-206ENST00000504690 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
SH3TC2-206ENST00000504690 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
SH3TC2-206ENST00000504690 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
SH3TC2-206ENST00000504690 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
SH3TC2-206ENST00000504690 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
SH3TC2-206ENST00000504690 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
SH3TC2-206ENST00000504690 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
SH3TC2-206ENST00000504690 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 CFTRP13569 1480 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 IGF1RP08069 1367 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 KNSTRNQ9Y448 316 aa16.2■□□□□ 0.18
SH3TC2-206ENST00000504690 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
SH3TC2-206ENST00000504690 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
SH3TC2-206ENST00000504690 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
SH3TC2-206ENST00000504690 PKD2Q13563 968 aa16.17■□□□□ 0.18
SH3TC2-206ENST00000504690 NESP48681 1621 aa16.17■□□□□ 0.18
SH3TC2-206ENST00000504690 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
SH3TC2-206ENST00000504690 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
SH3TC2-206ENST00000504690 ARXQ96QS3 562 aa16.14■□□□□ 0.17
SH3TC2-206ENST00000504690 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
SH3TC2-206ENST00000504690 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
SH3TC2-206ENST00000504690 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
SH3TC2-206ENST00000504690 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
SH3TC2-206ENST00000504690 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
SH3TC2-206ENST00000504690 EIF5BO60841 1220 aaKnown RBP16.11■□□□□ 0.17
SH3TC2-206ENST00000504690 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
SH3TC2-206ENST00000504690 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
SH3TC2-206ENST00000504690 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
SH3TC2-206ENST00000504690 RGS3P49796 1198 aa16.05■□□□□ 0.16
SH3TC2-206ENST00000504690 TMF1P82094 1093 aa16.04■□□□□ 0.16
SH3TC2-206ENST00000504690 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
SH3TC2-206ENST00000504690 SYNJ1O43426 1573 aa16.03■□□□□ 0.16
SH3TC2-206ENST00000504690 NUP155O75694 1391 aa16.03■□□□□ 0.16
SH3TC2-206ENST00000504690 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
SH3TC2-206ENST00000504690 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
SH3TC2-206ENST00000504690 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
SH3TC2-206ENST00000504690 KIF21BO75037 1637 aa16.02■□□□□ 0.16
SH3TC2-206ENST00000504690 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
SH3TC2-206ENST00000504690 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
SH3TC2-206ENST00000504690 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
SH3TC2-206ENST00000504690 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
SH3TC2-206ENST00000504690 ANP32BQ92688 251 aaKnown RBP15.98■□□□□ 0.15
SH3TC2-206ENST00000504690 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms