RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
PDGFC-204ENST00000504672 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
PDGFC-204ENST00000504672 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
PDGFC-204ENST00000504672 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
PDGFC-204ENST00000504672 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
PDGFC-204ENST00000504672 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
PDGFC-204ENST00000504672 KDM6BO15054 1643 aa16.3■□□□□ 0.2
PDGFC-204ENST00000504672 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
PDGFC-204ENST00000504672 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
PDGFC-204ENST00000504672 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
PDGFC-204ENST00000504672 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.19
PDGFC-204ENST00000504672 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
PDGFC-204ENST00000504672 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
PDGFC-204ENST00000504672 PTPRGP23470 1445 aa16.2■□□□□ 0.18
PDGFC-204ENST00000504672 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
PDGFC-204ENST00000504672 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
PDGFC-204ENST00000504672 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
PDGFC-204ENST00000504672 IGF1RP08069 1367 aa16.16■□□□□ 0.18
PDGFC-204ENST00000504672 KIAA0586Q9BVV6 1533 aa16.16■□□□□ 0.18
PDGFC-204ENST00000504672 COL17A1Q9UMD9 1497 aaPredicted RBP16.14■□□□□ 0.17
PDGFC-204ENST00000504672 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
PDGFC-204ENST00000504672 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
PDGFC-204ENST00000504672 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.16
PDGFC-204ENST00000504672 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
PDGFC-204ENST00000504672 PLB1Q6P1J6 1458 aa16.07■□□□□ 0.16
PDGFC-204ENST00000504672 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
PDGFC-204ENST00000504672 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
PDGFC-204ENST00000504672 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
PDGFC-204ENST00000504672 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.16
PDGFC-204ENST00000504672 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.15
PDGFC-204ENST00000504672 GLI2P10070 1586 aa16.01■□□□□ 0.15
PDGFC-204ENST00000504672 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
PDGFC-204ENST00000504672 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
PDGFC-204ENST00000504672 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
PDGFC-204ENST00000504672 KCNH8Q96L42 1107 aa15.99■□□□□ 0.15
PDGFC-204ENST00000504672 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
PDGFC-204ENST00000504672 CUL7Q14999 1698 aa15.94■□□□□ 0.14
PDGFC-204ENST00000504672 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
PDGFC-204ENST00000504672 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
PDGFC-204ENST00000504672 KDM5BQ9UGL1 1544 aa15.91■□□□□ 0.14
PDGFC-204ENST00000504672 MAP3K4Q9Y6R4 1608 aa15.89■□□□□ 0.13
PDGFC-204ENST00000504672 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
PDGFC-204ENST00000504672 CD109Q6YHK3 1445 aa15.87■□□□□ 0.13
PDGFC-204ENST00000504672 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
PDGFC-204ENST00000504672 WDR7Q9Y4E6 1490 aa15.84■□□□□ 0.13
PDGFC-204ENST00000504672 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.13
PDGFC-204ENST00000504672 RAPGEF3O95398 923 aa15.78■□□□□ 0.12
PDGFC-204ENST00000504672 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
PDGFC-204ENST00000504672 UGGT2Q9NYU1 1516 aa15.78■□□□□ 0.12
PDGFC-204ENST00000504672 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
PDGFC-204ENST00000504672 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
PDGFC-204ENST00000504672 PTPRMP28827 1452 aa15.75■□□□□ 0.11
PDGFC-204ENST00000504672 RAPGEF2Q9Y4G8 1499 aa15.75■□□□□ 0.11
PDGFC-204ENST00000504672 KIF21BO75037 1637 aa15.75■□□□□ 0.11
PDGFC-204ENST00000504672 P3H3Q8IVL6 736 aa15.74■□□□□ 0.11
PDGFC-204ENST00000504672 KIAA0556O60303 1618 aa15.73■□□□□ 0.11
PDGFC-204ENST00000504672 HSPA2P54652 639 aa15.73■□□□□ 0.11
PDGFC-204ENST00000504672 LMTK3Q96Q04 1460 aa15.68■□□□□ 0.1
PDGFC-204ENST00000504672 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
PDGFC-204ENST00000504672 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
PDGFC-204ENST00000504672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
PDGFC-204ENST00000504672 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
PDGFC-204ENST00000504672 ILDR2Q71H61 639 aa15.65■□□□□ 0.1
PDGFC-204ENST00000504672 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
PDGFC-204ENST00000504672 ABCA8O94911 1581 aa15.64■□□□□ 0.09
PDGFC-204ENST00000504672 ATP10BO94823 1461 aa15.63■□□□□ 0.09
PDGFC-204ENST00000504672 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
PDGFC-204ENST00000504672 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
PDGFC-204ENST00000504672 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
PDGFC-204ENST00000504672 PCF11O94913 1555 aaKnown RBP15.61■□□□□ 0.09
PDGFC-204ENST00000504672 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
PDGFC-204ENST00000504672 MLECQ14165 292 aa15.59■□□□□ 0.09
PDGFC-204ENST00000504672 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
PDGFC-204ENST00000504672 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
PDGFC-204ENST00000504672 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
PDGFC-204ENST00000504672 SOCS7O14512 581 aa15.55■□□□□ 0.08
PDGFC-204ENST00000504672 BCORL1Q5H9F3 1711 aa15.52■□□□□ 0.08
PDGFC-204ENST00000504672 NEO1Q92859 1461 aa15.52■□□□□ 0.07
PDGFC-204ENST00000504672 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
PDGFC-204ENST00000504672 FOXD1Q16676 465 aa15.49■□□□□ 0.07
PDGFC-204ENST00000504672 ABCA9Q8IUA7 1624 aa15.49■□□□□ 0.07
PDGFC-204ENST00000504672 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
PDGFC-204ENST00000504672 RIMS1Q86UR5 1692 aaKnown RBP15.48■□□□□ 0.07
PDGFC-204ENST00000504672 DENND4BO75064 1496 aaPredicted RBP15.47■□□□□ 0.07
PDGFC-204ENST00000504672 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
PDGFC-204ENST00000504672 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
PDGFC-204ENST00000504672 AKNAQ7Z591 1439 aa15.46■□□□□ 0.07
PDGFC-204ENST00000504672 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
PDGFC-204ENST00000504672 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
PDGFC-204ENST00000504672 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
PDGFC-204ENST00000504672 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
PDGFC-204ENST00000504672 FANCAO15360 1455 aa15.4■□□□□ 0.06
PDGFC-204ENST00000504672 ARHGEF40Q8TER5 1519 aa15.39■□□□□ 0.05
PDGFC-204ENST00000504672 NUP153P49790 1475 aaKnown RBP15.39■□□□□ 0.05
PDGFC-204ENST00000504672 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
PDGFC-204ENST00000504672 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
PDGFC-204ENST00000504672 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
PDGFC-204ENST00000504672 SIGLEC1Q9BZZ2 1709 aa15.35■□□□□ 0.05
PDGFC-204ENST00000504672 ZFYVE16Q7Z3T8 1539 aa15.35■□□□□ 0.05
PDGFC-204ENST00000504672 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms