RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 UBE2Q2Q8WVN8 375 aa13.78□□□□□ -0.2
ITGA1-203ENST00000504669 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
ITGA1-203ENST00000504669 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
ITGA1-203ENST00000504669 IRX6P78412 446 aaPredicted RBP13.72□□□□□ -0.21
ITGA1-203ENST00000504669 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
ITGA1-203ENST00000504669 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
ITGA1-203ENST00000504669 HNRNPUQ00839 825 aaKnown RBP eCLIP13.68□□□□□ -0.22
ITGA1-203ENST00000504669 ZNF771Q7L3S4 317 aaPredicted RBP13.67□□□□□ -0.22
ITGA1-203ENST00000504669 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
ITGA1-203ENST00000504669 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
ITGA1-203ENST00000504669 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
ITGA1-203ENST00000504669 MIER1Q8N108 512 aa13.64□□□□□ -0.23
ITGA1-203ENST00000504669 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
ITGA1-203ENST00000504669 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
ITGA1-203ENST00000504669 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
ITGA1-203ENST00000504669 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
ITGA1-203ENST00000504669 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
ITGA1-203ENST00000504669 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
ITGA1-203ENST00000504669 HOMEZQ8IX15 550 aa13.57□□□□□ -0.24
ITGA1-203ENST00000504669 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
ITGA1-203ENST00000504669 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
ITGA1-203ENST00000504669 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
ITGA1-203ENST00000504669 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
ITGA1-203ENST00000504669 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
ITGA1-203ENST00000504669 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
ITGA1-203ENST00000504669 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
ITGA1-203ENST00000504669 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
ITGA1-203ENST00000504669 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
ITGA1-203ENST00000504669 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
ITGA1-203ENST00000504669 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
ITGA1-203ENST00000504669 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
ITGA1-203ENST00000504669 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
ITGA1-203ENST00000504669 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
ITGA1-203ENST00000504669 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
ITGA1-203ENST00000504669 GSE1Q14687 1217 aa13.4□□□□□ -0.26
ITGA1-203ENST00000504669 NRDCO43847 1150 aa13.39□□□□□ -0.27
ITGA1-203ENST00000504669 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
ITGA1-203ENST00000504669 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
ITGA1-203ENST00000504669 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
ITGA1-203ENST00000504669 ZRSR1Q15695 479 aaKnown RBP13.39□□□□□ -0.27
ITGA1-203ENST00000504669 MAP7D2Q96T17 732 aa13.39□□□□□ -0.27
ITGA1-203ENST00000504669 DRC7Q8IY82 874 aa13.38□□□□□ -0.27
ITGA1-203ENST00000504669 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
ITGA1-203ENST00000504669 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
ITGA1-203ENST00000504669 DDX10Q13206 875 aaKnown RBP13.37□□□□□ -0.27
ITGA1-203ENST00000504669 TPM2P07951 284 aa13.37□□□□□ -0.27
ITGA1-203ENST00000504669 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
ITGA1-203ENST00000504669 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
ITGA1-203ENST00000504669 TAF3Q5VWG9 929 aa13.36□□□□□ -0.27
ITGA1-203ENST00000504669 MTERF4Q7Z6M4 381 aaKnown RBP13.35□□□□□ -0.27
ITGA1-203ENST00000504669 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
ITGA1-203ENST00000504669 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
ITGA1-203ENST00000504669 NEFHP12036 1026 aa13.34□□□□□ -0.27
ITGA1-203ENST00000504669 TEX35Q5T0J7 233 aa13.33□□□□□ -0.28
ITGA1-203ENST00000504669 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
ITGA1-203ENST00000504669 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
ITGA1-203ENST00000504669 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
ITGA1-203ENST00000504669 NOC3LQ8WTT2 800 aaKnown RBP13.32□□□□□ -0.28
ITGA1-203ENST00000504669 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
ITGA1-203ENST00000504669 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
ITGA1-203ENST00000504669 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
ITGA1-203ENST00000504669 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
ITGA1-203ENST00000504669 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
ITGA1-203ENST00000504669 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
ITGA1-203ENST00000504669 HSCBQ8IWL3 235 aa13.28□□□□□ -0.28
ITGA1-203ENST00000504669 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
ITGA1-203ENST00000504669 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
ITGA1-203ENST00000504669 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
ITGA1-203ENST00000504669 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
ITGA1-203ENST00000504669 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
ITGA1-203ENST00000504669 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
ITGA1-203ENST00000504669 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
ITGA1-203ENST00000504669 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
ITGA1-203ENST00000504669 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
ITGA1-203ENST00000504669 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
ITGA1-203ENST00000504669 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
ITGA1-203ENST00000504669 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
ITGA1-203ENST00000504669 RDXP35241 583 aaKnown RBP13.24□□□□□ -0.29
ITGA1-203ENST00000504669 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
ITGA1-203ENST00000504669 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
ITGA1-203ENST00000504669 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
ITGA1-203ENST00000504669 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
ITGA1-203ENST00000504669 GPS2Q13227 327 aa13.2□□□□□ -0.3
ITGA1-203ENST00000504669 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
ITGA1-203ENST00000504669 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
ITGA1-203ENST00000504669 GOLGA6L4A6NEF3 574 aa13.17□□□□□ -0.3
ITGA1-203ENST00000504669 TSPYL1Q9H0U9 437 aa13.16□□□□□ -0.3
ITGA1-203ENST00000504669 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
ITGA1-203ENST00000504669 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
ITGA1-203ENST00000504669 NAP1L2Q9ULW6 460 aaPredicted RBP13.16□□□□□ -0.3
ITGA1-203ENST00000504669 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
ITGA1-203ENST00000504669 RGS3P49796 1198 aa13.14□□□□□ -0.31
ITGA1-203ENST00000504669 E9PSI1 815 aa13.14□□□□□ -0.31
ITGA1-203ENST00000504669 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
ITGA1-203ENST00000504669 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
ITGA1-203ENST00000504669 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
ITGA1-203ENST00000504669 R3HCC1Q9Y3T6 440 aaKnown RBP13.13□□□□□ -0.31
ITGA1-203ENST00000504669 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
ITGA1-203ENST00000504669 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
ITGA1-203ENST00000504669 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms