RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
NPHP3-AS1-202ENST00000504440 BCANQ96GW7 911 aa10.54□□□□□ -0.72
NPHP3-AS1-202ENST00000504440 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
NPHP3-AS1-202ENST00000504440 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
NPHP3-AS1-202ENST00000504440 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 TRIM26Q12899 539 aaPredicted RBP10.51□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 CIZ1Q9ULV3 898 aaPredicted RBP10.51□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 EIF4G1Q04637 1599 aaKnown RBP10.46□□□□□ -0.73
NPHP3-AS1-202ENST00000504440 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 TAOK2Q9UL54 1235 aa10.42□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.74
NPHP3-AS1-202ENST00000504440 WIZO95785 1651 aa10.35□□□□□ -0.75
NPHP3-AS1-202ENST00000504440 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
NPHP3-AS1-202ENST00000504440 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
NPHP3-AS1-202ENST00000504440 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
NPHP3-AS1-202ENST00000504440 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
NPHP3-AS1-202ENST00000504440 HS6ST3Q8IZP7 471 aa10.29□□□□□ -0.76
NPHP3-AS1-202ENST00000504440 NUBP1P53384 320 aa10.28□□□□□ -0.76
NPHP3-AS1-202ENST00000504440 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 GSE1Q14687 1217 aa10.27□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 TOP2AP11388 1531 aaKnown RBP10.24□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 ZEB1P37275 1124 aaPredicted RBP10.24□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
NPHP3-AS1-202ENST00000504440 RIOK3O14730 519 aaKnown RBP10.2□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 TTBK1Q5TCY1 1321 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 HMGXB3Q12766 1538 aa10.18□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 STK25O00506 426 aa10.16□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
NPHP3-AS1-202ENST00000504440 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 RBM42Q9BTD8 480 aaKnown RBP10.13□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 ABCC8Q09428 1581 aa10.13□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 NBR1Q14596 966 aa10.12□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 REM2Q8IYK8 340 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 VGFO15240 615 aaPredicted RBP10.1□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
NPHP3-AS1-202ENST00000504440 PYGBP11216 843 aa10.08□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 SOGA1O94964 1423 aa10.07□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 RUSC2Q8N2Y8 1516 aa10.04□□□□□ -0.8
NPHP3-AS1-202ENST00000504440 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
NPHP3-AS1-202ENST00000504440 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
NPHP3-AS1-202ENST00000504440 NESP48681 1621 aa10.01□□□□□ -0.81
NPHP3-AS1-202ENST00000504440 CEP162Q5TB80 1403 aa10.01□□□□□ -0.81
NPHP3-AS1-202ENST00000504440 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
NPHP3-AS1-202ENST00000504440 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 TNIKQ9UKE5 1360 aa9.95□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 CFTRP13569 1480 aa9.95□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 TSPYL2Q9H2G4 693 aaPredicted RBP9.94□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 RYDENQ9NUL5 291 aaKnown RBP9.93□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 RANGAP1P46060 587 aaPredicted RBP9.91□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 PRDM2Q13029 1718 aa9.91□□□□□ -0.82
NPHP3-AS1-202ENST00000504440 PCDHB8Q9UN66 801 aa9.87□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 PCDHB13Q9Y5F0 798 aa9.87□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 GOLGA3Q08378 1498 aa9.86□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 EEA1Q15075 1411 aa9.86□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 ZNF467Q7Z7K2 595 aaPredicted RBP9.86□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 FARP1Q9Y4F1 1045 aaPredicted RBP9.84□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 KIF21AQ7Z4S6 1674 aa9.84□□□□□ -0.83
NPHP3-AS1-202ENST00000504440 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 PDAP1Q13442 181 aaKnown RBP9.83□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 FANCD2Q9BXW9 1451 aa9.81□□□□□ -0.84
NPHP3-AS1-202ENST00000504440 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms