RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 ASTLQ6HA08 431 aaPredicted RBP6.12□□□□□ -1.43
PCAT4-201ENST00000504263 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 CCDC180Q9P1Z9 1646 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 PHF12Q96QT6 1004 aa6.09□□□□□ -1.43
PCAT4-201ENST00000504263 ATMINO43313 823 aaPredicted RBP6.08□□□□□ -1.44
PCAT4-201ENST00000504263 PABPN1Q86U42 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCAT4-201ENST00000504263 SNPHO15079 494 aa6.06□□□□□ -1.44
PCAT4-201ENST00000504263 MKRN4PQ13434 485 aaPredicted RBP6.06□□□□□ -1.44
PCAT4-201ENST00000504263 ABCC9O60706 1549 aa6.06□□□□□ -1.44
PCAT4-201ENST00000504263 POTEFA5A3E0 1075 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 TTBK1Q5TCY1 1321 aaPredicted RBP6□□□□□ -1.45
PCAT4-201ENST00000504263 PAK3O75914 559 aaPredicted RBP5.99□□□□□ -1.45
PCAT4-201ENST00000504263 SLAIN1Q8ND83 568 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 MS4A3Q96HJ5 214 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 FOXD4L1Q9NU39 408 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 CREBZFQ9NS37 354 aa5.97□□□□□ -1.45
PCAT4-201ENST00000504263 ATN1P54259 1190 aaPredicted RBP5.96□□□□□ -1.46
PCAT4-201ENST00000504263 HRCP23327 699 aa5.94□□□□□ -1.46
PCAT4-201ENST00000504263 MYT1LQ9UL68 1186 aa5.93□□□□□ -1.46
PCAT4-201ENST00000504263 PTGER2P43116 358 aa5.91□□□□□ -1.46
PCAT4-201ENST00000504263 IRX2Q9BZI1 471 aaPredicted RBP5.91□□□□□ -1.46
PCAT4-201ENST00000504263 EMP3P54852 163 aa5.9□□□□□ -1.47
PCAT4-201ENST00000504263 RGS20O76081 388 aa5.89□□□□□ -1.47
PCAT4-201ENST00000504263 MARVELD3Q96A59 401 aa5.89□□□□□ -1.47
PCAT4-201ENST00000504263 ATXN8OSP0DMR3 200 aa5.88□□□□□ -1.47
PCAT4-201ENST00000504263 COLQQ9Y215 455 aaPredicted RBP5.87□□□□□ -1.47
PCAT4-201ENST00000504263 PLA2G2EQ9NZK7 142 aa5.86□□□□□ -1.47
PCAT4-201ENST00000504263 HS3ST6Q96QI5 342 aa5.86□□□□□ -1.47
PCAT4-201ENST00000504263 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
PCAT4-201ENST00000504263 SEC24BO95487 1268 aa5.82□□□□□ -1.48
PCAT4-201ENST00000504263 DCAF8L2P0C7V8 631 aa5.82□□□□□ -1.48
PCAT4-201ENST00000504263 NPM1P06748 294 aaKnown RBP eCLIP5.81□□□□□ -1.48
PCAT4-201ENST00000504263 RB1CC1Q8TDY2 1594 aa5.8□□□□□ -1.48
PCAT4-201ENST00000504263 TRPC6Q9Y210 931 aa5.78□□□□□ -1.48
PCAT4-201ENST00000504263 NACADO15069 1562 aa5.78□□□□□ -1.48
PCAT4-201ENST00000504263 MNX1P50219 401 aaPredicted RBP5.77□□□□□ -1.49
PCAT4-201ENST00000504263 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 TIE1P35590 1138 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 FAM205CA6NFA0 338 aa5.75□□□□□ -1.49
PCAT4-201ENST00000504263 STAG3Q9UJ98 1225 aa5.75□□□□□ -1.49
PCAT4-201ENST00000504263 IER5LQ5T953 404 aa5.73□□□□□ -1.49
PCAT4-201ENST00000504263 KIF12Q96FN5 646 aa5.73□□□□□ -1.49
PCAT4-201ENST00000504263 MYO15BQ96JP2 1530 aa5.72□□□□□ -1.49
PCAT4-201ENST00000504263 TTLL13PA6NNM8 815 aa5.71□□□□□ -1.5
PCAT4-201ENST00000504263 CCDC61Q9Y6R9 512 aa5.71□□□□□ -1.5
PCAT4-201ENST00000504263 TSPYL2Q9H2G4 693 aaPredicted RBP5.68□□□□□ -1.5
PCAT4-201ENST00000504263 ZCCHC6Q5VYS8 1495 aaKnown RBP5.67□□□□□ -1.5
PCAT4-201ENST00000504263 UNC13AQ9UPW8 1703 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 DCAF1Q9Y4B6 1507 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 ZBTB22O15209 634 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 TRIM35Q9UPQ4 493 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 SLC4A1APQ9BWU0 796 aaKnown RBP5.65□□□□□ -1.5
PCAT4-201ENST00000504263 MAP3K13O43283 966 aa5.65□□□□□ -1.51
PCAT4-201ENST00000504263 PLCG2P16885 1265 aa5.62□□□□□ -1.51
PCAT4-201ENST00000504263 Q6ZNB5 142 aa5.62□□□□□ -1.51
PCAT4-201ENST00000504263 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.62□□□□□ -1.51
PCAT4-201ENST00000504263 BICRAQ9NZM4 1560 aa5.61□□□□□ -1.51
PCAT4-201ENST00000504263 ERICH6Q7L0X2 663 aa5.6□□□□□ -1.51
PCAT4-201ENST00000504263 HCSTQ9UBK5 93 aa5.6□□□□□ -1.51
PCAT4-201ENST00000504263 PPARGC1BQ86YN6 1023 aaKnown RBP5.59□□□□□ -1.51
PCAT4-201ENST00000504263 IRX5P78411 483 aaPredicted RBP5.58□□□□□ -1.52
PCAT4-201ENST00000504263 SCRIBQ14160 1630 aa5.57□□□□□ -1.52
PCAT4-201ENST00000504263 PRKCSHP14314 528 aaPredicted RBP5.57□□□□□ -1.52
PCAT4-201ENST00000504263 ZEB1P37275 1124 aaPredicted RBP5.57□□□□□ -1.52
PCAT4-201ENST00000504263 SHROOM4Q9ULL8 1493 aa5.56□□□□□ -1.52
PCAT4-201ENST00000504263 BCL11AQ9H165 835 aa5.54□□□□□ -1.52
PCAT4-201ENST00000504263 ACIN1Q9UKV3 1341 aaKnown RBP5.53□□□□□ -1.52
PCAT4-201ENST00000504263 CENPBP07199 599 aaPredicted RBP5.53□□□□□ -1.52
PCAT4-201ENST00000504263 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
PCAT4-201ENST00000504263 OCEL1Q9H607 264 aa5.52□□□□□ -1.53
PCAT4-201ENST00000504263 EHMT2Q96KQ7 1210 aa5.51□□□□□ -1.53
PCAT4-201ENST00000504263 SGIP1Q9BQI5 828 aa5.51□□□□□ -1.53
PCAT4-201ENST00000504263 CC2D2AQ9P2K1 1620 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 LAPTM4AQ15012 233 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 TMEM106CQ9BVX2 250 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 EIF4G1Q04637 1599 aaKnown RBP5.48□□□□□ -1.53
PCAT4-201ENST00000504263 ERBB3P21860 1342 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 PCDHB13Q9Y5F0 798 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 CECR2Q9BXF3 1484 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 FAM9AQ8IZU1 332 aaPredicted RBP5.46□□□□□ -1.54
PCAT4-201ENST00000504263 HOXB1P14653 301 aaPredicted RBP5.44□□□□□ -1.54
PCAT4-201ENST00000504263 SUZ12Q15022 739 aaKnown RBP5.44□□□□□ -1.54
PCAT4-201ENST00000504263 RASEFQ8IZ41 740 aa5.44□□□□□ -1.54
PCAT4-201ENST00000504263 NEUROD1Q13562 356 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 C3orf67Q6ZVT6 689 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 IFFO2Q5TF58 517 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 IFNL1Q8IU54 200 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 STK17AQ9UEE5 414 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 GTF3C3Q9Y5Q9 886 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 TRIM26Q12899 539 aaPredicted RBP5.42□□□□□ -1.54
PCAT4-201ENST00000504263 HOXB3P14651 431 aaPredicted RBP5.41□□□□□ -1.54
PCAT4-201ENST00000504263 TRAF7Q6Q0C0 670 aa5.41□□□□□ -1.54
PCAT4-201ENST00000504263 ANP32EQ9BTT0 268 aa5.41□□□□□ -1.54
PCAT4-201ENST00000504263 VARS2Q5ST30 1063 aaKnown RBP5.39□□□□□ -1.55
PCAT4-201ENST00000504263 ZNF687Q8N1G0 1237 aa5.39□□□□□ -1.55
PCAT4-201ENST00000504263 L3MBTL3Q96JM7 780 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms