RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 ASTLQ6HA08 431 aaPredicted RBP6.12□□□□□ -1.43
PCAT4-201ENST00000504263 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 CCDC180Q9P1Z9 1646 aa6.12□□□□□ -1.43
PCAT4-201ENST00000504263 PHF12Q96QT6 1004 aa6.09□□□□□ -1.43
PCAT4-201ENST00000504263 ATMINO43313 823 aaPredicted RBP6.08□□□□□ -1.44
PCAT4-201ENST00000504263 PABPN1Q86U42 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCAT4-201ENST00000504263 SNPHO15079 494 aa6.06□□□□□ -1.44
PCAT4-201ENST00000504263 MKRN4PQ13434 485 aaPredicted RBP6.06□□□□□ -1.44
PCAT4-201ENST00000504263 ABCC9O60706 1549 aa6.06□□□□□ -1.44
PCAT4-201ENST00000504263 POTEFA5A3E0 1075 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
PCAT4-201ENST00000504263 TTBK1Q5TCY1 1321 aaPredicted RBP6□□□□□ -1.45
PCAT4-201ENST00000504263 PAK3O75914 559 aaPredicted RBP5.99□□□□□ -1.45
PCAT4-201ENST00000504263 SLAIN1Q8ND83 568 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 MS4A3Q96HJ5 214 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 FOXD4L1Q9NU39 408 aa5.98□□□□□ -1.45
PCAT4-201ENST00000504263 CREBZFQ9NS37 354 aa5.97□□□□□ -1.45
PCAT4-201ENST00000504263 ATN1P54259 1190 aaPredicted RBP5.96□□□□□ -1.46
PCAT4-201ENST00000504263 HRCP23327 699 aa5.94□□□□□ -1.46
PCAT4-201ENST00000504263 MYT1LQ9UL68 1186 aa5.93□□□□□ -1.46
PCAT4-201ENST00000504263 PTGER2P43116 358 aa5.91□□□□□ -1.46
PCAT4-201ENST00000504263 IRX2Q9BZI1 471 aaPredicted RBP5.91□□□□□ -1.46
PCAT4-201ENST00000504263 EMP3P54852 163 aa5.9□□□□□ -1.47
PCAT4-201ENST00000504263 RGS20O76081 388 aa5.89□□□□□ -1.47
PCAT4-201ENST00000504263 MARVELD3Q96A59 401 aa5.89□□□□□ -1.47
PCAT4-201ENST00000504263 ATXN8OSP0DMR3 200 aa5.88□□□□□ -1.47
PCAT4-201ENST00000504263 COLQQ9Y215 455 aaPredicted RBP5.87□□□□□ -1.47
PCAT4-201ENST00000504263 PLA2G2EQ9NZK7 142 aa5.86□□□□□ -1.47
PCAT4-201ENST00000504263 HS3ST6Q96QI5 342 aa5.86□□□□□ -1.47
PCAT4-201ENST00000504263 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
PCAT4-201ENST00000504263 SEC24BO95487 1268 aa5.82□□□□□ -1.48
PCAT4-201ENST00000504263 DCAF8L2P0C7V8 631 aa5.82□□□□□ -1.48
PCAT4-201ENST00000504263 NPM1P06748 294 aaKnown RBP eCLIP5.81□□□□□ -1.48
PCAT4-201ENST00000504263 RB1CC1Q8TDY2 1594 aa5.8□□□□□ -1.48
PCAT4-201ENST00000504263 TRPC6Q9Y210 931 aa5.78□□□□□ -1.48
PCAT4-201ENST00000504263 NACADO15069 1562 aa5.78□□□□□ -1.48
PCAT4-201ENST00000504263 MNX1P50219 401 aaPredicted RBP5.77□□□□□ -1.49
PCAT4-201ENST00000504263 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 TIE1P35590 1138 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
PCAT4-201ENST00000504263 FAM205CA6NFA0 338 aa5.75□□□□□ -1.49
PCAT4-201ENST00000504263 STAG3Q9UJ98 1225 aa5.75□□□□□ -1.49
PCAT4-201ENST00000504263 IER5LQ5T953 404 aa5.73□□□□□ -1.49
PCAT4-201ENST00000504263 KIF12Q96FN5 646 aa5.73□□□□□ -1.49
PCAT4-201ENST00000504263 MYO15BQ96JP2 1530 aa5.72□□□□□ -1.49
PCAT4-201ENST00000504263 TTLL13PA6NNM8 815 aa5.71□□□□□ -1.5
PCAT4-201ENST00000504263 CCDC61Q9Y6R9 512 aa5.71□□□□□ -1.5
PCAT4-201ENST00000504263 TSPYL2Q9H2G4 693 aaPredicted RBP5.68□□□□□ -1.5
PCAT4-201ENST00000504263 ZCCHC6Q5VYS8 1495 aaKnown RBP5.67□□□□□ -1.5
PCAT4-201ENST00000504263 UNC13AQ9UPW8 1703 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 DCAF1Q9Y4B6 1507 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 ZBTB22O15209 634 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 TRIM35Q9UPQ4 493 aa5.66□□□□□ -1.5
PCAT4-201ENST00000504263 SLC4A1APQ9BWU0 796 aaKnown RBP5.65□□□□□ -1.5
PCAT4-201ENST00000504263 MAP3K13O43283 966 aa5.65□□□□□ -1.51
PCAT4-201ENST00000504263 PLCG2P16885 1265 aa5.62□□□□□ -1.51
PCAT4-201ENST00000504263 Q6ZNB5 142 aa5.62□□□□□ -1.51
PCAT4-201ENST00000504263 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.62□□□□□ -1.51
PCAT4-201ENST00000504263 BICRAQ9NZM4 1560 aa5.61□□□□□ -1.51
PCAT4-201ENST00000504263 ERICH6Q7L0X2 663 aa5.6□□□□□ -1.51
PCAT4-201ENST00000504263 HCSTQ9UBK5 93 aa5.6□□□□□ -1.51
PCAT4-201ENST00000504263 PPARGC1BQ86YN6 1023 aaKnown RBP5.59□□□□□ -1.51
PCAT4-201ENST00000504263 IRX5P78411 483 aaPredicted RBP5.58□□□□□ -1.52
PCAT4-201ENST00000504263 SCRIBQ14160 1630 aa5.57□□□□□ -1.52
PCAT4-201ENST00000504263 PRKCSHP14314 528 aaPredicted RBP5.57□□□□□ -1.52
PCAT4-201ENST00000504263 ZEB1P37275 1124 aaPredicted RBP5.57□□□□□ -1.52
PCAT4-201ENST00000504263 SHROOM4Q9ULL8 1493 aa5.56□□□□□ -1.52
PCAT4-201ENST00000504263 BCL11AQ9H165 835 aa5.54□□□□□ -1.52
PCAT4-201ENST00000504263 ACIN1Q9UKV3 1341 aaKnown RBP5.53□□□□□ -1.52
PCAT4-201ENST00000504263 CENPBP07199 599 aaPredicted RBP5.53□□□□□ -1.52
PCAT4-201ENST00000504263 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
PCAT4-201ENST00000504263 OCEL1Q9H607 264 aa5.52□□□□□ -1.53
PCAT4-201ENST00000504263 EHMT2Q96KQ7 1210 aa5.51□□□□□ -1.53
PCAT4-201ENST00000504263 SGIP1Q9BQI5 828 aa5.51□□□□□ -1.53
PCAT4-201ENST00000504263 CC2D2AQ9P2K1 1620 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 LAPTM4AQ15012 233 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 TMEM106CQ9BVX2 250 aa5.48□□□□□ -1.53
PCAT4-201ENST00000504263 EIF4G1Q04637 1599 aaKnown RBP5.48□□□□□ -1.53
PCAT4-201ENST00000504263 ERBB3P21860 1342 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 PCDHB13Q9Y5F0 798 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 CECR2Q9BXF3 1484 aa5.47□□□□□ -1.53
PCAT4-201ENST00000504263 FAM9AQ8IZU1 332 aaPredicted RBP5.46□□□□□ -1.54
PCAT4-201ENST00000504263 HOXB1P14653 301 aaPredicted RBP5.44□□□□□ -1.54
PCAT4-201ENST00000504263 SUZ12Q15022 739 aaKnown RBP5.44□□□□□ -1.54
PCAT4-201ENST00000504263 RASEFQ8IZ41 740 aa5.44□□□□□ -1.54
PCAT4-201ENST00000504263 NEUROD1Q13562 356 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 C3orf67Q6ZVT6 689 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 IFFO2Q5TF58 517 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 IFNL1Q8IU54 200 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 STK17AQ9UEE5 414 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 GTF3C3Q9Y5Q9 886 aa5.43□□□□□ -1.54
PCAT4-201ENST00000504263 TRIM26Q12899 539 aaPredicted RBP5.42□□□□□ -1.54
PCAT4-201ENST00000504263 HOXB3P14651 431 aaPredicted RBP5.41□□□□□ -1.54
PCAT4-201ENST00000504263 TRAF7Q6Q0C0 670 aa5.41□□□□□ -1.54
PCAT4-201ENST00000504263 ANP32EQ9BTT0 268 aa5.41□□□□□ -1.54
PCAT4-201ENST00000504263 VARS2Q5ST30 1063 aaKnown RBP5.39□□□□□ -1.55
PCAT4-201ENST00000504263 ZNF687Q8N1G0 1237 aa5.39□□□□□ -1.55
PCAT4-201ENST00000504263 L3MBTL3Q96JM7 780 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms