RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 POTEMA6NI47 508 aa7.64□□□□□ -1.19
USP46-205ENST00000504078 PCDH10Q9P2E7 1040 aa7.64□□□□□ -1.19
USP46-205ENST00000504078 ZRANB1Q9UGI0 708 aa7.63□□□□□ -1.19
USP46-205ENST00000504078 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
USP46-205ENST00000504078 POTEGQ6S5H5 508 aa7.6□□□□□ -1.19
USP46-205ENST00000504078 CUX2O14529 1486 aa7.59□□□□□ -1.19
USP46-205ENST00000504078 POTEB2H3BUK9 544 aa7.57□□□□□ -1.2
USP46-205ENST00000504078 GALR2O43603 387 aaPredicted RBP7.57□□□□□ -1.2
USP46-205ENST00000504078 NESP48681 1621 aa7.53□□□□□ -1.2
USP46-205ENST00000504078 PAK3O75914 559 aaPredicted RBP7.53□□□□□ -1.2
USP46-205ENST00000504078 STAG3Q9UJ98 1225 aa7.53□□□□□ -1.2
USP46-205ENST00000504078 CREBZFQ9NS37 354 aa7.52□□□□□ -1.21
USP46-205ENST00000504078 SMARCA2P51531 1590 aa7.5□□□□□ -1.21
USP46-205ENST00000504078 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
USP46-205ENST00000504078 MAMSTRQ6ZN01 415 aa7.48□□□□□ -1.21
USP46-205ENST00000504078 TRIM41Q8WV44 630 aa7.48□□□□□ -1.21
USP46-205ENST00000504078 PELP1Q8IZL8 1130 aaKnown RBP7.46□□□□□ -1.22
USP46-205ENST00000504078 KIF21AQ7Z4S6 1674 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 ATAD2BQ9ULI0 1458 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 C7P10643 843 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 SLC39A7Q92504 469 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 PHF12Q96QT6 1004 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 SMARCA4P51532 1647 aa7.45□□□□□ -1.22
USP46-205ENST00000504078 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP46-205ENST00000504078 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
USP46-205ENST00000504078 HMGXB3Q12766 1538 aa7.43□□□□□ -1.22
USP46-205ENST00000504078 ASTLQ6HA08 431 aaPredicted RBP7.43□□□□□ -1.22
USP46-205ENST00000504078 METRNQ9UJH8 293 aa7.43□□□□□ -1.22
USP46-205ENST00000504078 BAZ1BQ9UIG0 1483 aaKnown RBP7.4□□□□□ -1.22
USP46-205ENST00000504078 ATMINO43313 823 aaPredicted RBP7.39□□□□□ -1.23
USP46-205ENST00000504078 POTEJP0CG39 1038 aa7.38□□□□□ -1.23
USP46-205ENST00000504078 FAM163AQ96GL9 167 aaPredicted RBP7.38□□□□□ -1.23
USP46-205ENST00000504078 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
USP46-205ENST00000504078 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
USP46-205ENST00000504078 LAMC3Q9Y6N6 1575 aa7.36□□□□□ -1.23
USP46-205ENST00000504078 BAZ1AQ9NRL2 1556 aaPredicted RBP7.35□□□□□ -1.23
USP46-205ENST00000504078 MS4A3Q96HJ5 214 aa7.34□□□□□ -1.23
USP46-205ENST00000504078 MNX1P50219 401 aaPredicted RBP7.33□□□□□ -1.24
USP46-205ENST00000504078 MROH2BQ7Z745 1585 aa7.31□□□□□ -1.24
USP46-205ENST00000504078 MRC2Q9UBG0 1479 aa7.3□□□□□ -1.24
USP46-205ENST00000504078 WDR62O43379 1518 aa7.3□□□□□ -1.24
USP46-205ENST00000504078 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
USP46-205ENST00000504078 PDS5BQ9NTI5 1447 aa7.28□□□□□ -1.24
USP46-205ENST00000504078 ATN1P54259 1190 aaPredicted RBP7.28□□□□□ -1.24
USP46-205ENST00000504078 SPDYE4A6NLX3 237 aa7.27□□□□□ -1.25
USP46-205ENST00000504078 CDAN1Q8IWY9 1227 aa7.27□□□□□ -1.25
USP46-205ENST00000504078 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
USP46-205ENST00000504078 WIZO95785 1651 aa7.24□□□□□ -1.25
USP46-205ENST00000504078 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
USP46-205ENST00000504078 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
USP46-205ENST00000504078 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
USP46-205ENST00000504078 POTEFA5A3E0 1075 aa7.23□□□□□ -1.25
USP46-205ENST00000504078 CCDC61Q9Y6R9 512 aa7.22□□□□□ -1.25
USP46-205ENST00000504078 CADPSQ9ULU8 1353 aa7.21□□□□□ -1.25
USP46-205ENST00000504078 TIE1P35590 1138 aa7.21□□□□□ -1.26
USP46-205ENST00000504078 KIF12Q96FN5 646 aa7.21□□□□□ -1.26
USP46-205ENST00000504078 TSPYL2Q9H2G4 693 aaPredicted RBP7.21□□□□□ -1.26
USP46-205ENST00000504078 BMP2KQ9NSY1 1161 aaPredicted RBP7.21□□□□□ -1.26
USP46-205ENST00000504078 FANCD2Q9BXW9 1451 aa7.21□□□□□ -1.26
USP46-205ENST00000504078 URB2Q14146 1524 aaKnown RBP7.19□□□□□ -1.26
USP46-205ENST00000504078 SEC24BO95487 1268 aa7.18□□□□□ -1.26
USP46-205ENST00000504078 ARHGEF11O15085 1522 aa7.17□□□□□ -1.26
USP46-205ENST00000504078 IER5LQ5T953 404 aa7.15□□□□□ -1.26
USP46-205ENST00000504078 ZNF608Q9ULD9 1512 aaPredicted RBP7.15□□□□□ -1.27
USP46-205ENST00000504078 COLQQ9Y215 455 aaPredicted RBP7.14□□□□□ -1.27
USP46-205ENST00000504078 EIF4G3O43432 1585 aaKnown RBP7.13□□□□□ -1.27
USP46-205ENST00000504078 MAP3K13O43283 966 aa7.13□□□□□ -1.27
USP46-205ENST00000504078 ST18O60284 1047 aa7.13□□□□□ -1.27
USP46-205ENST00000504078 CHD1O14646 1710 aa7.13□□□□□ -1.27
USP46-205ENST00000504078 TTLL13PA6NNM8 815 aa7.12□□□□□ -1.27
USP46-205ENST00000504078 CSRNP3Q8WYN3 585 aa7.12□□□□□ -1.27
USP46-205ENST00000504078 TRPC6Q9Y210 931 aa7.12□□□□□ -1.27
USP46-205ENST00000504078 PRDM2Q13029 1718 aa7.11□□□□□ -1.27
USP46-205ENST00000504078 MMRN1Q13201 1228 aa7.11□□□□□ -1.27
USP46-205ENST00000504078 SLAIN1Q8ND83 568 aa7.11□□□□□ -1.27
USP46-205ENST00000504078 CFTRP13569 1480 aa7.11□□□□□ -1.27
USP46-205ENST00000504078 SPNS2Q8IVW8 549 aa7.1□□□□□ -1.27
USP46-205ENST00000504078 SGIP1Q9BQI5 828 aa7.1□□□□□ -1.27
USP46-205ENST00000504078 TOP2AP11388 1531 aaKnown RBP7.1□□□□□ -1.27
USP46-205ENST00000504078 ARAP1Q96P48 1450 aa7.1□□□□□ -1.27
USP46-205ENST00000504078 PLEKHG5O94827 1062 aa7.08□□□□□ -1.28
USP46-205ENST00000504078 TMEM121BQ9BXQ6 578 aaPredicted RBP7.08□□□□□ -1.28
USP46-205ENST00000504078 TRIM35Q9UPQ4 493 aa7.07□□□□□ -1.28
USP46-205ENST00000504078 IFT140Q96RY7 1462 aa7.06□□□□□ -1.28
USP46-205ENST00000504078 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
USP46-205ENST00000504078 TOPBP1Q92547 1522 aa7.06□□□□□ -1.28
USP46-205ENST00000504078 SNPHO15079 494 aa7.05□□□□□ -1.28
USP46-205ENST00000504078 RASEFQ8IZ41 740 aa7.03□□□□□ -1.28
USP46-205ENST00000504078 PROM2Q8N271 834 aa7.03□□□□□ -1.28
USP46-205ENST00000504078 RSF1Q96T23 1441 aaPredicted RBP7.02□□□□□ -1.29
USP46-205ENST00000504078 AQRO60306 1485 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP46-205ENST00000504078 DNMBPQ6XZF7 1577 aa7.02□□□□□ -1.29
USP46-205ENST00000504078 PLCG2P16885 1265 aa7.01□□□□□ -1.29
USP46-205ENST00000504078 EHMT2Q96KQ7 1210 aa7.01□□□□□ -1.29
USP46-205ENST00000504078 PCDHB13Q9Y5F0 798 aa7.01□□□□□ -1.29
USP46-205ENST00000504078 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
USP46-205ENST00000504078 MIER1Q8N108 512 aa7□□□□□ -1.29
USP46-205ENST00000504078 CCDC88BA6NC98 1476 aa6.99□□□□□ -1.29
USP46-205ENST00000504078 SNAPC4Q5SXM2 1469 aa6.99□□□□□ -1.29
USP46-205ENST00000504078 CLASP1Q7Z460 1538 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms