RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
PDLIM7-210ENST00000503827 NPM1P06748 294 aaKnown RBP eCLIP28.74■■■□□ 2.19
PDLIM7-210ENST00000503827 MAPKBP1O60336 1514 aa28.69■■■□□ 2.18
PDLIM7-210ENST00000503827 DIP2BQ9P265 1576 aa28.67■■■□□ 2.18
PDLIM7-210ENST00000503827 KDM6BO15054 1643 aa28.65■■■□□ 2.18
PDLIM7-210ENST00000503827 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
PDLIM7-210ENST00000503827 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
PDLIM7-210ENST00000503827 ADCY10Q96PN6 1610 aa28.6■■■□□ 2.17
PDLIM7-210ENST00000503827 TSPOAP1O95153 1857 aa28.58■■■□□ 2.17
PDLIM7-210ENST00000503827 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
PDLIM7-210ENST00000503827 ILDR1Q86SU0 546 aaPredicted RBP28.46■■■□□ 2.15
PDLIM7-210ENST00000503827 KIAA0586Q9BVV6 1533 aa28.4■■■□□ 2.14
PDLIM7-210ENST00000503827 CUL7Q14999 1698 aa28.29■■■□□ 2.12
PDLIM7-210ENST00000503827 PTPRGP23470 1445 aa28.28■■■□□ 2.12
PDLIM7-210ENST00000503827 PPRC1Q5VV67 1664 aaKnown RBP28.24■■■□□ 2.11
PDLIM7-210ENST00000503827 ADGRL1O94910 1474 aa28.23■■■□□ 2.11
PDLIM7-210ENST00000503827 IGF1RP08069 1367 aa28.23■■■□□ 2.11
PDLIM7-210ENST00000503827 GLI2P10070 1586 aa28.22■■■□□ 2.11
PDLIM7-210ENST00000503827 ABCC2Q92887 1545 aa28.22■■■□□ 2.11
PDLIM7-210ENST00000503827 TTBK1Q5TCY1 1321 aaPredicted RBP28.21■■■□□ 2.11
PDLIM7-210ENST00000503827 PLB1Q6P1J6 1458 aa28.21■■■□□ 2.11
PDLIM7-210ENST00000503827 ASXL2Q76L83 1435 aa28.19■■■□□ 2.1
PDLIM7-210ENST00000503827 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
PDLIM7-210ENST00000503827 CARMIL2Q6F5E8 1435 aa28.18■■■□□ 2.1
PDLIM7-210ENST00000503827 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
PDLIM7-210ENST00000503827 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
PDLIM7-210ENST00000503827 HECW2Q9P2P5 1572 aa28.09■■■□□ 2.09
PDLIM7-210ENST00000503827 MAP3K4Q9Y6R4 1608 aa28.06■■■□□ 2.08
PDLIM7-210ENST00000503827 IQGAP2Q13576 1575 aa28.05■■■□□ 2.08
PDLIM7-210ENST00000503827 COL17A1Q9UMD9 1497 aaPredicted RBP28.05■■■□□ 2.08
PDLIM7-210ENST00000503827 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
PDLIM7-210ENST00000503827 CARMIL1Q5VZK9 1371 aa28.04■■■□□ 2.08
PDLIM7-210ENST00000503827 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
PDLIM7-210ENST00000503827 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
PDLIM7-210ENST00000503827 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
PDLIM7-210ENST00000503827 ZCCHC11Q5TAX3 1644 aaKnown RBP27.95■■■□□ 2.06
PDLIM7-210ENST00000503827 DISP1Q96F81 1524 aa27.93■■■□□ 2.06
PDLIM7-210ENST00000503827 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
PDLIM7-210ENST00000503827 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
PDLIM7-210ENST00000503827 KIAA0556O60303 1618 aa27.8■■■□□ 2.04
PDLIM7-210ENST00000503827 CFAP43Q8NDM7 1665 aa27.76■■■□□ 2.03
PDLIM7-210ENST00000503827 MAGI3Q5TCQ9 1506 aa27.73■■■□□ 2.03
PDLIM7-210ENST00000503827 CD109Q6YHK3 1445 aa27.73■■■□□ 2.03
PDLIM7-210ENST00000503827 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
PDLIM7-210ENST00000503827 FBXO41Q8TF61 875 aa27.71■■■□□ 2.03
PDLIM7-210ENST00000503827 KIF21BO75037 1637 aa27.69■■■□□ 2.02
PDLIM7-210ENST00000503827 KCNH8Q96L42 1107 aa27.66■■■□□ 2.02
PDLIM7-210ENST00000503827 CTTNBP2Q8WZ74 1663 aa27.61■■■□□ 2.01
PDLIM7-210ENST00000503827 ABCA8O94911 1581 aa27.58■■■□□ 2.01
PDLIM7-210ENST00000503827 GOLGA3Q08378 1498 aa27.57■■■□□ 2
PDLIM7-210ENST00000503827 ARAP3Q8WWN8 1544 aa27.54■■■□□ 2
PDLIM7-210ENST00000503827 ADAMTSL3P82987 1691 aa27.49■■□□□ 1.99
PDLIM7-210ENST00000503827 PTPRMP28827 1452 aa27.49■■□□□ 1.99
PDLIM7-210ENST00000503827 PHLDB1Q86UU1 1377 aa27.43■■□□□ 1.98
PDLIM7-210ENST00000503827 FAM9AQ8IZU1 332 aaPredicted RBP27.41■■□□□ 1.98
PDLIM7-210ENST00000503827 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
PDLIM7-210ENST00000503827 BCORL1Q5H9F3 1711 aa27.38■■□□□ 1.97
PDLIM7-210ENST00000503827 PCF11O94913 1555 aaKnown RBP27.36■■□□□ 1.97
PDLIM7-210ENST00000503827 ATP10BO94823 1461 aa27.34■■□□□ 1.97
PDLIM7-210ENST00000503827 ARID3CA6NKF2 412 aa27.34■■□□□ 1.97
PDLIM7-210ENST00000503827 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
PDLIM7-210ENST00000503827 RAPGEF3O95398 923 aa27.33■■□□□ 1.97
PDLIM7-210ENST00000503827 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
PDLIM7-210ENST00000503827 NEO1Q92859 1461 aa27.31■■□□□ 1.96
PDLIM7-210ENST00000503827 LMTK3Q96Q04 1460 aa27.3■■□□□ 1.96
PDLIM7-210ENST00000503827 FRMPD1Q5SYB0 1578 aa27.25■■□□□ 1.95
PDLIM7-210ENST00000503827 RIMS1Q86UR5 1692 aaKnown RBP27.24■■□□□ 1.95
PDLIM7-210ENST00000503827 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
PDLIM7-210ENST00000503827 PRXQ9BXM0 1461 aa27.23■■□□□ 1.95
PDLIM7-210ENST00000503827 RAPGEF6Q8TEU7 1601 aa27.18■■□□□ 1.94
PDLIM7-210ENST00000503827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
PDLIM7-210ENST00000503827 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
PDLIM7-210ENST00000503827 ARHGEF40Q8TER5 1519 aa27.16■■□□□ 1.94
PDLIM7-210ENST00000503827 RICTORQ6R327 1708 aa27.13■■□□□ 1.93
PDLIM7-210ENST00000503827 HSPA2P54652 639 aa27.13■■□□□ 1.93
PDLIM7-210ENST00000503827 SAMD9Q5K651 1589 aa27.11■■□□□ 1.93
PDLIM7-210ENST00000503827 DENND4BO75064 1496 aaPredicted RBP27.11■■□□□ 1.93
PDLIM7-210ENST00000503827 POGZQ7Z3K3 1410 aa27.09■■□□□ 1.93
PDLIM7-210ENST00000503827 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
PDLIM7-210ENST00000503827 CERKQ8TCT0 537 aa27.09■■□□□ 1.93
PDLIM7-210ENST00000503827 FANCAO15360 1455 aa27.06■■□□□ 1.92
PDLIM7-210ENST00000503827 CFAP74Q9C0B2 1584 aa27.06■■□□□ 1.92
PDLIM7-210ENST00000503827 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
PDLIM7-210ENST00000503827 FHOD3Q2V2M9 1422 aa27.04■■□□□ 1.92
PDLIM7-210ENST00000503827 NUP153P49790 1475 aaKnown RBP27.02■■□□□ 1.92
PDLIM7-210ENST00000503827 FER1L4A9Z1Z3 1794 aa27■■□□□ 1.91
PDLIM7-210ENST00000503827 PLEKHD1A6NEE1 506 aa27■■□□□ 1.91
PDLIM7-210ENST00000503827 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
PDLIM7-210ENST00000503827 ZMYM4Q5VZL5 1548 aa27■■□□□ 1.91
PDLIM7-210ENST00000503827 ZFYVE16Q7Z3T8 1539 aa26.99■■□□□ 1.91
PDLIM7-210ENST00000503827 SIGLEC1Q9BZZ2 1709 aa26.98■■□□□ 1.91
PDLIM7-210ENST00000503827 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
PDLIM7-210ENST00000503827 TTC37Q6PGP7 1564 aa26.94■■□□□ 1.9
PDLIM7-210ENST00000503827 MLECQ14165 292 aa26.94■■□□□ 1.9
PDLIM7-210ENST00000503827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.94■■□□□ 1.92e-7■■□□□ 14.3
PDLIM7-210ENST00000503827 YEATS2Q9ULM3 1422 aa26.93■■□□□ 1.9
PDLIM7-210ENST00000503827 PREX1Q8TCU6 1659 aa26.9■■□□□ 1.9
PDLIM7-210ENST00000503827 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
PDLIM7-210ENST00000503827 HECW1Q76N89 1606 aa26.89■■□□□ 1.9
PDLIM7-210ENST00000503827 RANGAP1P46060 587 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms