RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 FOXD1Q16676 465 aa15.64■□□□□ 0.09
COPB2-202ENST00000502734 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
COPB2-202ENST00000502734 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
COPB2-202ENST00000502734 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
COPB2-202ENST00000502734 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
COPB2-202ENST00000502734 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
COPB2-202ENST00000502734 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
COPB2-202ENST00000502734 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.07
COPB2-202ENST00000502734 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
COPB2-202ENST00000502734 CUL7Q14999 1698 aa15.45■□□□□ 0.06
COPB2-202ENST00000502734 FAM69CQ0P6D2 419 aa15.42■□□□□ 0.06
COPB2-202ENST00000502734 PTPRGP23470 1445 aa15.42■□□□□ 0.06
COPB2-202ENST00000502734 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
COPB2-202ENST00000502734 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
COPB2-202ENST00000502734 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
COPB2-202ENST00000502734 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
COPB2-202ENST00000502734 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
COPB2-202ENST00000502734 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
COPB2-202ENST00000502734 ADCY10Q96PN6 1610 aa15.32■□□□□ 0.04
COPB2-202ENST00000502734 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
COPB2-202ENST00000502734 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
COPB2-202ENST00000502734 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.04
COPB2-202ENST00000502734 DISP1Q96F81 1524 aa15.27■□□□□ 0.03
COPB2-202ENST00000502734 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
COPB2-202ENST00000502734 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
COPB2-202ENST00000502734 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
COPB2-202ENST00000502734 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
COPB2-202ENST00000502734 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
COPB2-202ENST00000502734 DIP2BQ9P265 1576 aa15.22■□□□□ 0.03
COPB2-202ENST00000502734 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.03
COPB2-202ENST00000502734 ASXL2Q76L83 1435 aa15.21■□□□□ 0.03
COPB2-202ENST00000502734 PRXQ9BXM0 1461 aa15.2■□□□□ 0.02
COPB2-202ENST00000502734 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
COPB2-202ENST00000502734 GOLGA3Q08378 1498 aa15.16■□□□□ 0.02
COPB2-202ENST00000502734 KDM5BQ9UGL1 1544 aa15.16■□□□□ 0.02
COPB2-202ENST00000502734 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
COPB2-202ENST00000502734 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
COPB2-202ENST00000502734 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
COPB2-202ENST00000502734 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
COPB2-202ENST00000502734 GLI2P10070 1586 aa15.11■□□□□ 0.01
COPB2-202ENST00000502734 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
COPB2-202ENST00000502734 KDM6BO15054 1643 aa15.08■□□□□ 0
COPB2-202ENST00000502734 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0
COPB2-202ENST00000502734 EEA1Q15075 1411 aa15.07■□□□□ 0
COPB2-202ENST00000502734 KDM4FA0A1W2PPD8 638 aa15.05■□□□□ -0
COPB2-202ENST00000502734 WDR7Q9Y4E6 1490 aa15.05■□□□□ -0
COPB2-202ENST00000502734 ZCCHC11Q5TAX3 1644 aaKnown RBP15.05■□□□□ -0
COPB2-202ENST00000502734 ARID3CA6NKF2 412 aa15.04■□□□□ -0
COPB2-202ENST00000502734 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
COPB2-202ENST00000502734 ABCA8O94911 1581 aa15.03■□□□□ -0
COPB2-202ENST00000502734 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
COPB2-202ENST00000502734 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
COPB2-202ENST00000502734 CD109Q6YHK3 1445 aa15□□□□□ -0.01
COPB2-202ENST00000502734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
COPB2-202ENST00000502734 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
COPB2-202ENST00000502734 PPRC1Q5VV67 1664 aaKnown RBP15□□□□□ -0.01
COPB2-202ENST00000502734 ATP10BO94823 1461 aa14.98□□□□□ -0.01
COPB2-202ENST00000502734 MAP3K4Q9Y6R4 1608 aa14.98□□□□□ -0.01
COPB2-202ENST00000502734 MAGI3Q5TCQ9 1506 aa14.94□□□□□ -0.02
COPB2-202ENST00000502734 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
COPB2-202ENST00000502734 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
COPB2-202ENST00000502734 PLEKHD1A6NEE1 506 aa14.92□□□□□ -0.02
COPB2-202ENST00000502734 SAMD9Q5K651 1589 aa14.92□□□□□ -0.02
COPB2-202ENST00000502734 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
COPB2-202ENST00000502734 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
COPB2-202ENST00000502734 PHLDB1Q86UU1 1377 aa14.87□□□□□ -0.03
COPB2-202ENST00000502734 RAPGEF6Q8TEU7 1601 aa14.87□□□□□ -0.03
COPB2-202ENST00000502734 NUP153P49790 1475 aaKnown RBP14.86□□□□□ -0.03
COPB2-202ENST00000502734 KIF21BO75037 1637 aa14.85□□□□□ -0.03
COPB2-202ENST00000502734 ADGRL1O94910 1474 aa14.84□□□□□ -0.03
COPB2-202ENST00000502734 ARAP3Q8WWN8 1544 aa14.83□□□□□ -0.04
COPB2-202ENST00000502734 RAPGEF3O95398 923 aa14.83□□□□□ -0.04
COPB2-202ENST00000502734 ATP1B4Q9UN42 357 aaPredicted RBP14.83□□□□□ -0.04
COPB2-202ENST00000502734 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
COPB2-202ENST00000502734 ABCA9Q8IUA7 1624 aa14.8□□□□□ -0.04
COPB2-202ENST00000502734 NEO1Q92859 1461 aa14.79□□□□□ -0.04
COPB2-202ENST00000502734 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
COPB2-202ENST00000502734 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
COPB2-202ENST00000502734 ADRA2BP18089 450 aa14.74□□□□□ -0.05
COPB2-202ENST00000502734 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
COPB2-202ENST00000502734 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
COPB2-202ENST00000502734 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
COPB2-202ENST00000502734 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
COPB2-202ENST00000502734 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
COPB2-202ENST00000502734 DENND4BO75064 1496 aaPredicted RBP14.7□□□□□ -0.06
COPB2-202ENST00000502734 EFCAB2Q5VUJ9 269 aa14.7□□□□□ -0.06
COPB2-202ENST00000502734 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
COPB2-202ENST00000502734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.7□□□□□ -0.06
COPB2-202ENST00000502734 FANCAO15360 1455 aa14.69□□□□□ -0.06
COPB2-202ENST00000502734 PLCH2O75038 1416 aa14.68□□□□□ -0.06
COPB2-202ENST00000502734 MSH5O43196 834 aa14.67□□□□□ -0.06
COPB2-202ENST00000502734 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
COPB2-202ENST00000502734 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
COPB2-202ENST00000502734 TTC37Q6PGP7 1564 aa14.63□□□□□ -0.07
COPB2-202ENST00000502734 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
COPB2-202ENST00000502734 FRMPD1Q5SYB0 1578 aa14.61□□□□□ -0.07
COPB2-202ENST00000502734 CLIP1P30622 1438 aa14.6□□□□□ -0.07
COPB2-202ENST00000502734 CFAP74Q9C0B2 1584 aa14.6□□□□□ -0.07
COPB2-202ENST00000502734 CASKIN1Q8WXD9 1431 aa14.59□□□□□ -0.07
COPB2-202ENST00000502734 PTPRMP28827 1452 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms