RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
SH3RF1-202ENST00000502315 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
SH3RF1-202ENST00000502315 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
SH3RF1-202ENST00000502315 PRG4Q92954 1404 aaPredicted RBP12.59□□□□□ -0.39
SH3RF1-202ENST00000502315 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-202ENST00000502315 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
SH3RF1-202ENST00000502315 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
SH3RF1-202ENST00000502315 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
SH3RF1-202ENST00000502315 IGF1RP08069 1367 aa12.56□□□□□ -0.4
SH3RF1-202ENST00000502315 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
SH3RF1-202ENST00000502315 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
SH3RF1-202ENST00000502315 CUL7Q14999 1698 aa12.51□□□□□ -0.41
SH3RF1-202ENST00000502315 MAPKBP1O60336 1514 aa12.51□□□□□ -0.41
SH3RF1-202ENST00000502315 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
SH3RF1-202ENST00000502315 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
SH3RF1-202ENST00000502315 CARMIL1Q5VZK9 1371 aa12.46□□□□□ -0.41
SH3RF1-202ENST00000502315 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
SH3RF1-202ENST00000502315 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
SH3RF1-202ENST00000502315 ADRA2BP18089 450 aa12.43□□□□□ -0.42
SH3RF1-202ENST00000502315 KIF13AQ9H1H9 1805 aa12.43□□□□□ -0.42
SH3RF1-202ENST00000502315 PTPRGP23470 1445 aa12.43□□□□□ -0.42
SH3RF1-202ENST00000502315 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
SH3RF1-202ENST00000502315 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
SH3RF1-202ENST00000502315 UHRF1BP1LA0JNW5 1464 aa12.39□□□□□ -0.43
SH3RF1-202ENST00000502315 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
SH3RF1-202ENST00000502315 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
SH3RF1-202ENST00000502315 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
SH3RF1-202ENST00000502315 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
SH3RF1-202ENST00000502315 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
SH3RF1-202ENST00000502315 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
SH3RF1-202ENST00000502315 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
SH3RF1-202ENST00000502315 GLI2P10070 1586 aa12.33□□□□□ -0.44
SH3RF1-202ENST00000502315 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
SH3RF1-202ENST00000502315 KDM6BO15054 1643 aa12.29□□□□□ -0.44
SH3RF1-202ENST00000502315 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
SH3RF1-202ENST00000502315 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
SH3RF1-202ENST00000502315 KDM5BQ9UGL1 1544 aa12.29□□□□□ -0.44
SH3RF1-202ENST00000502315 FAM9AQ8IZU1 332 aaPredicted RBP12.28□□□□□ -0.44
SH3RF1-202ENST00000502315 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
SH3RF1-202ENST00000502315 TEX14Q8IWB6 1497 aa12.25□□□□□ -0.45
SH3RF1-202ENST00000502315 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
SH3RF1-202ENST00000502315 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
SH3RF1-202ENST00000502315 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
SH3RF1-202ENST00000502315 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
SH3RF1-202ENST00000502315 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
SH3RF1-202ENST00000502315 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
SH3RF1-202ENST00000502315 WDR7Q9Y4E6 1490 aa12.18□□□□□ -0.46
SH3RF1-202ENST00000502315 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
SH3RF1-202ENST00000502315 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
SH3RF1-202ENST00000502315 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
SH3RF1-202ENST00000502315 PPRC1Q5VV67 1664 aaKnown RBP12.16□□□□□ -0.46
SH3RF1-202ENST00000502315 ZCCHC11Q5TAX3 1644 aaKnown RBP12.16□□□□□ -0.46
SH3RF1-202ENST00000502315 CTTNBP2Q8WZ74 1663 aa12.15□□□□□ -0.46
SH3RF1-202ENST00000502315 ABCA8O94911 1581 aa12.13□□□□□ -0.47
SH3RF1-202ENST00000502315 CD109Q6YHK3 1445 aa12.13□□□□□ -0.47
SH3RF1-202ENST00000502315 COL17A1Q9UMD9 1497 aaPredicted RBP12.12□□□□□ -0.47
SH3RF1-202ENST00000502315 EEA1Q15075 1411 aa12.11□□□□□ -0.47
SH3RF1-202ENST00000502315 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
SH3RF1-202ENST00000502315 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
SH3RF1-202ENST00000502315 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
SH3RF1-202ENST00000502315 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
SH3RF1-202ENST00000502315 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
SH3RF1-202ENST00000502315 ATP10BO94823 1461 aa12.05□□□□□ -0.48
SH3RF1-202ENST00000502315 NEO1Q92859 1461 aa12.02□□□□□ -0.49
SH3RF1-202ENST00000502315 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
SH3RF1-202ENST00000502315 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
SH3RF1-202ENST00000502315 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
SH3RF1-202ENST00000502315 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
SH3RF1-202ENST00000502315 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
SH3RF1-202ENST00000502315 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
SH3RF1-202ENST00000502315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
SH3RF1-202ENST00000502315 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-202ENST00000502315 NUP153P49790 1475 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-202ENST00000502315 HECW2Q9P2P5 1572 aa11.91□□□□□ -0.5
SH3RF1-202ENST00000502315 KIF21BO75037 1637 aa11.9□□□□□ -0.5
SH3RF1-202ENST00000502315 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
SH3RF1-202ENST00000502315 MAGI2Q86UL8 1455 aa11.89□□□□□ -0.51
SH3RF1-202ENST00000502315 CFAP74Q9C0B2 1584 aa11.89□□□□□ -0.51
SH3RF1-202ENST00000502315 RAPGEF3O95398 923 aa11.89□□□□□ -0.51
SH3RF1-202ENST00000502315 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-202ENST00000502315 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-202ENST00000502315 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
SH3RF1-202ENST00000502315 ADAMTSL3P82987 1691 aa11.87□□□□□ -0.51
SH3RF1-202ENST00000502315 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
SH3RF1-202ENST00000502315 AKNAQ7Z591 1439 aa11.87□□□□□ -0.51
SH3RF1-202ENST00000502315 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
SH3RF1-202ENST00000502315 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
SH3RF1-202ENST00000502315 FANCAO15360 1455 aa11.86□□□□□ -0.51
SH3RF1-202ENST00000502315 PTPRMP28827 1452 aa11.86□□□□□ -0.51
SH3RF1-202ENST00000502315 PLCH2O75038 1416 aa11.85□□□□□ -0.51
SH3RF1-202ENST00000502315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3RF1-202ENST00000502315 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
SH3RF1-202ENST00000502315 ARID4BQ4LE39 1312 aaPredicted RBP11.83□□□□□ -0.52
SH3RF1-202ENST00000502315 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.52
SH3RF1-202ENST00000502315 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
SH3RF1-202ENST00000502315 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
SH3RF1-202ENST00000502315 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
SH3RF1-202ENST00000502315 RICTORQ6R327 1708 aa11.81□□□□□ -0.52
SH3RF1-202ENST00000502315 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
SH3RF1-202ENST00000502315 FBXO41Q8TF61 875 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms