RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 THOC2Q8NI27 1593 aaKnown RBP10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 SAMD9Q5K651 1589 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
LYSMD3-203ENST00000500869 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
LYSMD3-203ENST00000500869 NEUROD1Q13562 356 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 CARMIL1Q5VZK9 1371 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
LYSMD3-203ENST00000500869 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
LYSMD3-203ENST00000500869 CASKIN1Q8WXD9 1431 aa10.71□□□□□ -0.7
LYSMD3-203ENST00000500869 TTBK1Q5TCY1 1321 aaPredicted RBP10.7□□□□□ -0.7
LYSMD3-203ENST00000500869 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
LYSMD3-203ENST00000500869 ARHGEF11O15085 1522 aa10.65□□□□□ -0.7
LYSMD3-203ENST00000500869 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
LYSMD3-203ENST00000500869 SETD5Q9C0A6 1442 aa10.64□□□□□ -0.71
LYSMD3-203ENST00000500869 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
LYSMD3-203ENST00000500869 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 PBRM1Q86U86 1689 aa10.61□□□□□ -0.71
LYSMD3-203ENST00000500869 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
LYSMD3-203ENST00000500869 MIER1Q8N108 512 aa10.6□□□□□ -0.71
LYSMD3-203ENST00000500869 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 GTF3C3Q9Y5Q9 886 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 NESP48681 1621 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 UGGT2Q9NYU1 1516 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 FGD6Q6ZV73 1430 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
LYSMD3-203ENST00000500869 PDS5BQ9NTI5 1447 aa10.54□□□□□ -0.72
LYSMD3-203ENST00000500869 KDM5BQ9UGL1 1544 aa10.51□□□□□ -0.73
LYSMD3-203ENST00000500869 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 NCOA2Q15596 1464 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 WDR62O43379 1518 aa10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 MAGI3Q5TCQ9 1506 aa10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 NAIPQ13075 1403 aa10.46□□□□□ -0.74
LYSMD3-203ENST00000500869 PTPRKQ15262 1439 aa10.46□□□□□ -0.74
LYSMD3-203ENST00000500869 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
LYSMD3-203ENST00000500869 MRC2Q9UBG0 1479 aa10.45□□□□□ -0.74
LYSMD3-203ENST00000500869 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
LYSMD3-203ENST00000500869 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
LYSMD3-203ENST00000500869 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
LYSMD3-203ENST00000500869 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
LYSMD3-203ENST00000500869 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
LYSMD3-203ENST00000500869 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
LYSMD3-203ENST00000500869 IFT140Q96RY7 1462 aa10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
LYSMD3-203ENST00000500869 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
LYSMD3-203ENST00000500869 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
LYSMD3-203ENST00000500869 ROCK1Q13464 1354 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 MYT1Q01538 1121 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 ITSN2Q9NZM3 1697 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 DISP1Q96F81 1524 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
LYSMD3-203ENST00000500869 KDM6BO15054 1643 aa10.36□□□□□ -0.75
LYSMD3-203ENST00000500869 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
LYSMD3-203ENST00000500869 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
LYSMD3-203ENST00000500869 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
LYSMD3-203ENST00000500869 CDK13Q14004 1512 aaKnown RBP10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 GRIN2AQ12879 1464 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 SIN3AQ96ST3 1273 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 ITGAEP38570 1179 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
LYSMD3-203ENST00000500869 DAPK1P53355 1430 aa10.3□□□□□ -0.76
LYSMD3-203ENST00000500869 TONSLQ96HA7 1378 aa10.29□□□□□ -0.76
LYSMD3-203ENST00000500869 RPRD2Q5VT52 1461 aaKnown RBP10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 KDM5DQ9BY66 1539 aa10.27□□□□□ -0.77
LYSMD3-203ENST00000500869 ABCC5O15440 1437 aa10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 SHANK2Q9UPX8 1470 aa10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 ZNF608Q9ULD9 1512 aaPredicted RBP10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 NUP160Q12769 1436 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms