RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
SEC61A1-207ENST00000498837 ADCY10Q96PN6 1610 aa26■■□□□ 1.75
SEC61A1-207ENST00000498837 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
SEC61A1-207ENST00000498837 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
SEC61A1-207ENST00000498837 NPM1P06748 294 aaKnown RBP eCLIP25.97■■□□□ 1.75
SEC61A1-207ENST00000498837 MAPKBP1O60336 1514 aa25.96■■□□□ 1.75
SEC61A1-207ENST00000498837 DIP2BQ9P265 1576 aa25.95■■□□□ 1.74
SEC61A1-207ENST00000498837 IGF1RP08069 1367 aa25.95■■□□□ 1.74
SEC61A1-207ENST00000498837 KIAA0586Q9BVV6 1533 aa25.94■■□□□ 1.74
SEC61A1-207ENST00000498837 CUL7Q14999 1698 aa25.93■■□□□ 1.74
SEC61A1-207ENST00000498837 TSPOAP1O95153 1857 aa25.92■■□□□ 1.74
SEC61A1-207ENST00000498837 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
SEC61A1-207ENST00000498837 KDM6BO15054 1643 aa25.8■■□□□ 1.72
SEC61A1-207ENST00000498837 TTBK1Q5TCY1 1321 aaPredicted RBP25.76■■□□□ 1.71
SEC61A1-207ENST00000498837 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
SEC61A1-207ENST00000498837 PTPRGP23470 1445 aa25.76■■□□□ 1.71
SEC61A1-207ENST00000498837 IQGAP2Q13576 1575 aa25.69■■□□□ 1.7
SEC61A1-207ENST00000498837 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
SEC61A1-207ENST00000498837 CARMIL2Q6F5E8 1435 aa25.67■■□□□ 1.7
SEC61A1-207ENST00000498837 KDM4FA0A1W2PPD8 638 aa25.66■■□□□ 1.7
SEC61A1-207ENST00000498837 ABCC2Q92887 1545 aa25.66■■□□□ 1.7
SEC61A1-207ENST00000498837 PPRC1Q5VV67 1664 aaKnown RBP25.64■■□□□ 1.69
SEC61A1-207ENST00000498837 ASXL2Q76L83 1435 aa25.61■■□□□ 1.69
SEC61A1-207ENST00000498837 DISP1Q96F81 1524 aa25.58■■□□□ 1.69
SEC61A1-207ENST00000498837 GLI2P10070 1586 aa25.57■■□□□ 1.68
SEC61A1-207ENST00000498837 UHRF1BP1LA0JNW5 1464 aa25.57■■□□□ 1.68
SEC61A1-207ENST00000498837 PLB1Q6P1J6 1458 aa25.57■■□□□ 1.68
SEC61A1-207ENST00000498837 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
SEC61A1-207ENST00000498837 UGGT2Q9NYU1 1516 aa25.49■■□□□ 1.67
SEC61A1-207ENST00000498837 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
SEC61A1-207ENST00000498837 ZCCHC11Q5TAX3 1644 aaKnown RBP25.48■■□□□ 1.67
SEC61A1-207ENST00000498837 KDM5BQ9UGL1 1544 aa25.47■■□□□ 1.67
SEC61A1-207ENST00000498837 MAP3K4Q9Y6R4 1608 aa25.47■■□□□ 1.67
SEC61A1-207ENST00000498837 KIAA0556O60303 1618 aa25.46■■□□□ 1.67
SEC61A1-207ENST00000498837 EPRSP07814 1512 aaKnown RBP25.46■■□□□ 1.67
SEC61A1-207ENST00000498837 COL17A1Q9UMD9 1497 aaPredicted RBP25.43■■□□□ 1.66
SEC61A1-207ENST00000498837 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
SEC61A1-207ENST00000498837 ADGRL1O94910 1474 aa25.37■■□□□ 1.65
SEC61A1-207ENST00000498837 TEX14Q8IWB6 1497 aa25.34■■□□□ 1.65
SEC61A1-207ENST00000498837 WDR7Q9Y4E6 1490 aa25.3■■□□□ 1.64
SEC61A1-207ENST00000498837 CFAP43Q8NDM7 1665 aa25.24■■□□□ 1.63
SEC61A1-207ENST00000498837 ABCA8O94911 1581 aa25.24■■□□□ 1.63
SEC61A1-207ENST00000498837 GOLGA3Q08378 1498 aa25.23■■□□□ 1.63
SEC61A1-207ENST00000498837 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
SEC61A1-207ENST00000498837 CD109Q6YHK3 1445 aa25.19■■□□□ 1.62
SEC61A1-207ENST00000498837 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
SEC61A1-207ENST00000498837 ILDR1Q86SU0 546 aaPredicted RBP25.16■■□□□ 1.62
SEC61A1-207ENST00000498837 PRXQ9BXM0 1461 aa25.15■■□□□ 1.62
SEC61A1-207ENST00000498837 HECW2Q9P2P5 1572 aa25.14■■□□□ 1.62
SEC61A1-207ENST00000498837 KIF21BO75037 1637 aa25.07■■□□□ 1.6
SEC61A1-207ENST00000498837 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
SEC61A1-207ENST00000498837 P3H3Q8IVL6 736 aa25.06■■□□□ 1.6
SEC61A1-207ENST00000498837 ATP10BO94823 1461 aa25.02■■□□□ 1.6
SEC61A1-207ENST00000498837 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
SEC61A1-207ENST00000498837 ABCA9Q8IUA7 1624 aa24.97■■□□□ 1.59
SEC61A1-207ENST00000498837 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SEC61A1-207ENST00000498837 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
SEC61A1-207ENST00000498837 RAPGEF6Q8TEU7 1601 aa24.94■■□□□ 1.58
SEC61A1-207ENST00000498837 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
SEC61A1-207ENST00000498837 ADAMTSL3P82987 1691 aa24.87■■□□□ 1.57
SEC61A1-207ENST00000498837 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
SEC61A1-207ENST00000498837 RAPGEF3O95398 923 aa24.86■■□□□ 1.57
SEC61A1-207ENST00000498837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
SEC61A1-207ENST00000498837 HNRNPUL2Q1KMD3 747 aaKnown RBP24.84■■□□□ 1.57
SEC61A1-207ENST00000498837 NEO1Q92859 1461 aa24.83■■□□□ 1.56
SEC61A1-207ENST00000498837 FRMPD1Q5SYB0 1578 aa24.81■■□□□ 1.56
SEC61A1-207ENST00000498837 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
SEC61A1-207ENST00000498837 NUP153P49790 1475 aaKnown RBP24.81■■□□□ 1.56
SEC61A1-207ENST00000498837 PTPRMP28827 1452 aa24.79■■□□□ 1.56
SEC61A1-207ENST00000498837 BCORL1Q5H9F3 1711 aa24.79■■□□□ 1.56
SEC61A1-207ENST00000498837 FHOD3Q2V2M9 1422 aa24.77■■□□□ 1.56
SEC61A1-207ENST00000498837 MADDQ8WXG6 1647 aa24.74■■□□□ 1.55
SEC61A1-207ENST00000498837 RICTORQ6R327 1708 aa24.73■■□□□ 1.55
SEC61A1-207ENST00000498837 ARID4BQ4LE39 1312 aaPredicted RBP24.7■■□□□ 1.54
SEC61A1-207ENST00000498837 PLEKHD1A6NEE1 506 aa24.69■■□□□ 1.54
SEC61A1-207ENST00000498837 EEA1Q15075 1411 aa24.69■■□□□ 1.54
SEC61A1-207ENST00000498837 RIMS1Q86UR5 1692 aaKnown RBP24.67■■□□□ 1.54
SEC61A1-207ENST00000498837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.66■■□□□ 1.54
SEC61A1-207ENST00000498837 ARHGEF40Q8TER5 1519 aa24.66■■□□□ 1.54
SEC61A1-207ENST00000498837 AKNAQ7Z591 1439 aa24.66■■□□□ 1.54
SEC61A1-207ENST00000498837 DENND4BO75064 1496 aaPredicted RBP24.65■■□□□ 1.54
SEC61A1-207ENST00000498837 TTC37Q6PGP7 1564 aa24.64■■□□□ 1.54
SEC61A1-207ENST00000498837 CFAP74Q9C0B2 1584 aa24.64■■□□□ 1.54
SEC61A1-207ENST00000498837 FANCAO15360 1455 aa24.63■■□□□ 1.53
SEC61A1-207ENST00000498837 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
SEC61A1-207ENST00000498837 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
SEC61A1-207ENST00000498837 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
SEC61A1-207ENST00000498837 FBXO41Q8TF61 875 aa24.6■■□□□ 1.53
SEC61A1-207ENST00000498837 LMTK3Q96Q04 1460 aa24.58■■□□□ 1.53
SEC61A1-207ENST00000498837 CDK13Q14004 1512 aaKnown RBP24.58■■□□□ 1.53
SEC61A1-207ENST00000498837 ZMYM4Q5VZL5 1548 aa24.56■■□□□ 1.52
SEC61A1-207ENST00000498837 YEATS2Q9ULM3 1422 aa24.53■■□□□ 1.52
SEC61A1-207ENST00000498837 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
SEC61A1-207ENST00000498837 HECW1Q76N89 1606 aa24.53■■□□□ 1.52
SEC61A1-207ENST00000498837 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
SEC61A1-207ENST00000498837 FER1L4A9Z1Z3 1794 aa24.49■■□□□ 1.51
SEC61A1-207ENST00000498837 POGZQ7Z3K3 1410 aa24.49■■□□□ 1.51
SEC61A1-207ENST00000498837 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
SEC61A1-207ENST00000498837 MAGI2Q86UL8 1455 aa24.47■■□□□ 1.51
SEC61A1-207ENST00000498837 HSPA2P54652 639 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms