RNA–Protein interactions for RNA: ENST00000498666.5

ITGB2-212, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best)

Gene ITGB2, Length 4,781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-212ENST00000498666 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
ITGB2-212ENST00000498666 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
ITGB2-212ENST00000498666 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
ITGB2-212ENST00000498666 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
ITGB2-212ENST00000498666 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
ITGB2-212ENST00000498666 ANP32EQ9BTT0 268 aa18.14■□□□□ 0.49
ITGB2-212ENST00000498666 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
ITGB2-212ENST00000498666 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
ITGB2-212ENST00000498666 NBR1Q14596 966 aa18.1■□□□□ 0.49
ITGB2-212ENST00000498666 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
ITGB2-212ENST00000498666 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
ITGB2-212ENST00000498666 STAG3Q9UJ98 1225 aa18.1■□□□□ 0.49
ITGB2-212ENST00000498666 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
ITGB2-212ENST00000498666 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
ITGB2-212ENST00000498666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
ITGB2-212ENST00000498666 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
ITGB2-212ENST00000498666 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
ITGB2-212ENST00000498666 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.47
ITGB2-212ENST00000498666 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.47
ITGB2-212ENST00000498666 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
ITGB2-212ENST00000498666 CCER2I3L3R5 266 aa18■□□□□ 0.47
ITGB2-212ENST00000498666 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
ITGB2-212ENST00000498666 PPP4R2Q9NY27 417 aa17.98■□□□□ 0.47
ITGB2-212ENST00000498666 ANP32BQ92688 251 aaKnown RBP17.98■□□□□ 0.47
ITGB2-212ENST00000498666 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
ITGB2-212ENST00000498666 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
ITGB2-212ENST00000498666 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
ITGB2-212ENST00000498666 WIZO95785 1651 aa17.96■□□□□ 0.47
ITGB2-212ENST00000498666 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
ITGB2-212ENST00000498666 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
ITGB2-212ENST00000498666 CUX2O14529 1486 aa17.92■□□□□ 0.46
ITGB2-212ENST00000498666 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
ITGB2-212ENST00000498666 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
ITGB2-212ENST00000498666 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
ITGB2-212ENST00000498666 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
ITGB2-212ENST00000498666 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
ITGB2-212ENST00000498666 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
ITGB2-212ENST00000498666 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
ITGB2-212ENST00000498666 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
ITGB2-212ENST00000498666 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
ITGB2-212ENST00000498666 RBM19Q9Y4C8 960 aaKnown RBP17.83■□□□□ 0.45
ITGB2-212ENST00000498666 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
ITGB2-212ENST00000498666 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
ITGB2-212ENST00000498666 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
ITGB2-212ENST00000498666 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
ITGB2-212ENST00000498666 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
ITGB2-212ENST00000498666 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
ITGB2-212ENST00000498666 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.44
ITGB2-212ENST00000498666 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.44
ITGB2-212ENST00000498666 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.44
ITGB2-212ENST00000498666 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
ITGB2-212ENST00000498666 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
ITGB2-212ENST00000498666 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
ITGB2-212ENST00000498666 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
ITGB2-212ENST00000498666 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
ITGB2-212ENST00000498666 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
ITGB2-212ENST00000498666 BECN1Q14457 450 aa17.73■□□□□ 0.43
ITGB2-212ENST00000498666 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
ITGB2-212ENST00000498666 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
ITGB2-212ENST00000498666 ARXQ96QS3 562 aa17.67■□□□□ 0.42
ITGB2-212ENST00000498666 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
ITGB2-212ENST00000498666 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
ITGB2-212ENST00000498666 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
ITGB2-212ENST00000498666 CHMP4BQ9H444 224 aaKnown RBP17.63■□□□□ 0.41
ITGB2-212ENST00000498666 FOXD1Q16676 465 aa17.63■□□□□ 0.41
ITGB2-212ENST00000498666 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
ITGB2-212ENST00000498666 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
ITGB2-212ENST00000498666 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
ITGB2-212ENST00000498666 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
ITGB2-212ENST00000498666 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
ITGB2-212ENST00000498666 PKD2Q13563 968 aa17.59■□□□□ 0.41
ITGB2-212ENST00000498666 TMF1P82094 1093 aa17.59■□□□□ 0.41
ITGB2-212ENST00000498666 RGS3P49796 1198 aa17.58■□□□□ 0.4
ITGB2-212ENST00000498666 MS4A1P11836 297 aa17.57■□□□□ 0.4
ITGB2-212ENST00000498666 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
ITGB2-212ENST00000498666 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
ITGB2-212ENST00000498666 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
ITGB2-212ENST00000498666 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
ITGB2-212ENST00000498666 DEKP35659 375 aaKnown RBP17.55■□□□□ 0.4
ITGB2-212ENST00000498666 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
ITGB2-212ENST00000498666 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
ITGB2-212ENST00000498666 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
ITGB2-212ENST00000498666 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
ITGB2-212ENST00000498666 RALBP1Q15311 655 aa17.52■□□□□ 0.39
ITGB2-212ENST00000498666 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
ITGB2-212ENST00000498666 KANK1Q14678 1352 aa17.51■□□□□ 0.39
ITGB2-212ENST00000498666 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
ITGB2-212ENST00000498666 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
ITGB2-212ENST00000498666 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
ITGB2-212ENST00000498666 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
ITGB2-212ENST00000498666 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
ITGB2-212ENST00000498666 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
ITGB2-212ENST00000498666 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
ITGB2-212ENST00000498666 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
ITGB2-212ENST00000498666 TRIM44Q96DX7 344 aaPredicted RBP17.47■□□□□ 0.39
ITGB2-212ENST00000498666 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
ITGB2-212ENST00000498666 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
ITGB2-212ENST00000498666 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
ITGB2-212ENST00000498666 NUP155O75694 1391 aa17.45■□□□□ 0.38
ITGB2-212ENST00000498666 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms