RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
CNOT4-211ENST00000498534 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
CNOT4-211ENST00000498534 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
CNOT4-211ENST00000498534 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.97
CNOT4-211ENST00000498534 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
CNOT4-211ENST00000498534 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
CNOT4-211ENST00000498534 IGF1RP08069 1367 aa20.97■□□□□ 0.95
CNOT4-211ENST00000498534 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
CNOT4-211ENST00000498534 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
CNOT4-211ENST00000498534 CUL7Q14999 1698 aa20.87■□□□□ 0.93
CNOT4-211ENST00000498534 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
CNOT4-211ENST00000498534 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
CNOT4-211ENST00000498534 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.92
CNOT4-211ENST00000498534 ABCC10Q5T3U5 1492 aa20.8■□□□□ 0.92
CNOT4-211ENST00000498534 PTPRGP23470 1445 aa20.78■□□□□ 0.92
CNOT4-211ENST00000498534 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
CNOT4-211ENST00000498534 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
CNOT4-211ENST00000498534 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
CNOT4-211ENST00000498534 CARMIL2Q6F5E8 1435 aa20.76■□□□□ 0.91
CNOT4-211ENST00000498534 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
CNOT4-211ENST00000498534 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
CNOT4-211ENST00000498534 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
CNOT4-211ENST00000498534 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
CNOT4-211ENST00000498534 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
CNOT4-211ENST00000498534 ABCC2Q92887 1545 aa20.61■□□□□ 0.89
CNOT4-211ENST00000498534 ADRA2BP18089 450 aa20.6■□□□□ 0.89
CNOT4-211ENST00000498534 TSPOAP1O95153 1857 aa20.59■□□□□ 0.89
CNOT4-211ENST00000498534 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
CNOT4-211ENST00000498534 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
CNOT4-211ENST00000498534 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
CNOT4-211ENST00000498534 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
CNOT4-211ENST00000498534 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
CNOT4-211ENST00000498534 KDM6BO15054 1643 aa20.56■□□□□ 0.88
CNOT4-211ENST00000498534 UGGT2Q9NYU1 1516 aa20.53■□□□□ 0.88
CNOT4-211ENST00000498534 GLI2P10070 1586 aa20.48■□□□□ 0.87
CNOT4-211ENST00000498534 KDM5BQ9UGL1 1544 aa20.47■□□□□ 0.87
CNOT4-211ENST00000498534 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
CNOT4-211ENST00000498534 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
CNOT4-211ENST00000498534 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
CNOT4-211ENST00000498534 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
CNOT4-211ENST00000498534 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
CNOT4-211ENST00000498534 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
CNOT4-211ENST00000498534 ZCCHC11Q5TAX3 1644 aaKnown RBP20.39■□□□□ 0.86
CNOT4-211ENST00000498534 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
CNOT4-211ENST00000498534 TEX14Q8IWB6 1497 aa20.37■□□□□ 0.85
CNOT4-211ENST00000498534 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
CNOT4-211ENST00000498534 PPRC1Q5VV67 1664 aaKnown RBP20.36■□□□□ 0.85
CNOT4-211ENST00000498534 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
CNOT4-211ENST00000498534 MSH5O43196 834 aa20.34■□□□□ 0.85
CNOT4-211ENST00000498534 WDR7Q9Y4E6 1490 aa20.34■□□□□ 0.85
CNOT4-211ENST00000498534 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
CNOT4-211ENST00000498534 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
CNOT4-211ENST00000498534 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
CNOT4-211ENST00000498534 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
CNOT4-211ENST00000498534 ABCA8O94911 1581 aa20.28■□□□□ 0.84
CNOT4-211ENST00000498534 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
CNOT4-211ENST00000498534 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
CNOT4-211ENST00000498534 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
CNOT4-211ENST00000498534 ADGRL1O94910 1474 aa20.21■□□□□ 0.83
CNOT4-211ENST00000498534 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
CNOT4-211ENST00000498534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
CNOT4-211ENST00000498534 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
CNOT4-211ENST00000498534 ATP10BO94823 1461 aa20.17■□□□□ 0.82
CNOT4-211ENST00000498534 EEA1Q15075 1411 aa20.14■□□□□ 0.81
CNOT4-211ENST00000498534 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
CNOT4-211ENST00000498534 PHLDB1Q86UU1 1377 aa20.09■□□□□ 0.81
CNOT4-211ENST00000498534 SAMD9Q5K651 1589 aa20.08■□□□□ 0.81
CNOT4-211ENST00000498534 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
CNOT4-211ENST00000498534 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
CNOT4-211ENST00000498534 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
CNOT4-211ENST00000498534 ABCA9Q8IUA7 1624 aa20.02■□□□□ 0.8
CNOT4-211ENST00000498534 RAPGEF3O95398 923 aa20■□□□□ 0.79
CNOT4-211ENST00000498534 FHOD3Q2V2M9 1422 aa20■□□□□ 0.79
CNOT4-211ENST00000498534 NUP153P49790 1475 aaKnown RBP19.99■□□□□ 0.79
CNOT4-211ENST00000498534 NEO1Q92859 1461 aa19.99■□□□□ 0.79
CNOT4-211ENST00000498534 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
CNOT4-211ENST00000498534 KIF21BO75037 1637 aa19.94■□□□□ 0.78
CNOT4-211ENST00000498534 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
CNOT4-211ENST00000498534 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
CNOT4-211ENST00000498534 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
CNOT4-211ENST00000498534 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
CNOT4-211ENST00000498534 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
CNOT4-211ENST00000498534 ATP1B4Q9UN42 357 aaPredicted RBP19.89■□□□□ 0.77
CNOT4-211ENST00000498534 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
CNOT4-211ENST00000498534 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
CNOT4-211ENST00000498534 FANCAO15360 1455 aa19.84■□□□□ 0.77
CNOT4-211ENST00000498534 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.77
CNOT4-211ENST00000498534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
CNOT4-211ENST00000498534 PTPRMP28827 1452 aa19.81■□□□□ 0.76
CNOT4-211ENST00000498534 FRMPD1Q5SYB0 1578 aa19.8■□□□□ 0.76
CNOT4-211ENST00000498534 CFAP74Q9C0B2 1584 aa19.8■□□□□ 0.76
CNOT4-211ENST00000498534 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
CNOT4-211ENST00000498534 ADAMTSL3P82987 1691 aa19.8■□□□□ 0.76
CNOT4-211ENST00000498534 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
CNOT4-211ENST00000498534 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
CNOT4-211ENST00000498534 BCORL1Q5H9F3 1711 aa19.76■□□□□ 0.75
CNOT4-211ENST00000498534 PLCH2O75038 1416 aa19.76■□□□□ 0.75
CNOT4-211ENST00000498534 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
CNOT4-211ENST00000498534 RICTORQ6R327 1708 aa19.75■□□□□ 0.75
CNOT4-211ENST00000498534 POGZQ7Z3K3 1410 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms