RNA–Protein interactions for RNA: ENST00000498251.2

CACNA1D-207, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-207ENST00000498251 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
CACNA1D-207ENST00000498251 KDM4FA0A1W2PPD8 638 aa18.66■□□□□ 0.58
CACNA1D-207ENST00000498251 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
CACNA1D-207ENST00000498251 TTBK1Q5TCY1 1321 aaPredicted RBP18.63■□□□□ 0.57
CACNA1D-207ENST00000498251 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
CACNA1D-207ENST00000498251 ABCC10Q5T3U5 1492 aa18.61■□□□□ 0.57
CACNA1D-207ENST00000498251 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
CACNA1D-207ENST00000498251 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
CACNA1D-207ENST00000498251 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
CACNA1D-207ENST00000498251 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
CACNA1D-207ENST00000498251 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
CACNA1D-207ENST00000498251 KDM6BO15054 1643 aa18.56■□□□□ 0.56
CACNA1D-207ENST00000498251 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
CACNA1D-207ENST00000498251 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
CACNA1D-207ENST00000498251 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
CACNA1D-207ENST00000498251 ADGRL1O94910 1474 aa18.37■□□□□ 0.53
CACNA1D-207ENST00000498251 PTPRGP23470 1445 aa18.36■□□□□ 0.53
CACNA1D-207ENST00000498251 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
CACNA1D-207ENST00000498251 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
CACNA1D-207ENST00000498251 IGF1RP08069 1367 aa18.32■□□□□ 0.52
CACNA1D-207ENST00000498251 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
CACNA1D-207ENST00000498251 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
CACNA1D-207ENST00000498251 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
CACNA1D-207ENST00000498251 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
CACNA1D-207ENST00000498251 CUL7Q14999 1698 aa18.25■□□□□ 0.51
CACNA1D-207ENST00000498251 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
CACNA1D-207ENST00000498251 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
CACNA1D-207ENST00000498251 PLB1Q6P1J6 1458 aa18.22■□□□□ 0.51
CACNA1D-207ENST00000498251 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
CACNA1D-207ENST00000498251 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
CACNA1D-207ENST00000498251 GLI2P10070 1586 aa18.18■□□□□ 0.5
CACNA1D-207ENST00000498251 UACAQ9BZF9 1416 aa18.17■□□□□ 0.5
CACNA1D-207ENST00000498251 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
CACNA1D-207ENST00000498251 IQGAP2Q13576 1575 aa18.15■□□□□ 0.5
CACNA1D-207ENST00000498251 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
CACNA1D-207ENST00000498251 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
CACNA1D-207ENST00000498251 UHRF1BP1LA0JNW5 1464 aa18.12■□□□□ 0.49
CACNA1D-207ENST00000498251 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
CACNA1D-207ENST00000498251 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
CACNA1D-207ENST00000498251 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
CACNA1D-207ENST00000498251 FOXD1Q16676 465 aa18.08■□□□□ 0.48
CACNA1D-207ENST00000498251 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.48
CACNA1D-207ENST00000498251 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
CACNA1D-207ENST00000498251 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
CACNA1D-207ENST00000498251 KIAA0556O60303 1618 aa18■□□□□ 0.47
CACNA1D-207ENST00000498251 KIF21BO75037 1637 aa18■□□□□ 0.47
CACNA1D-207ENST00000498251 CD109Q6YHK3 1445 aa17.99■□□□□ 0.47
CACNA1D-207ENST00000498251 FBXO41Q8TF61 875 aa17.98■□□□□ 0.47
CACNA1D-207ENST00000498251 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
CACNA1D-207ENST00000498251 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
CACNA1D-207ENST00000498251 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
CACNA1D-207ENST00000498251 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
CACNA1D-207ENST00000498251 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
CACNA1D-207ENST00000498251 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
CACNA1D-207ENST00000498251 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
CACNA1D-207ENST00000498251 ABCA8O94911 1581 aa17.85■□□□□ 0.45
CACNA1D-207ENST00000498251 PTPRMP28827 1452 aa17.85■□□□□ 0.45
CACNA1D-207ENST00000498251 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
CACNA1D-207ENST00000498251 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
CACNA1D-207ENST00000498251 HSPA2P54652 639 aa17.79■□□□□ 0.44
CACNA1D-207ENST00000498251 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
CACNA1D-207ENST00000498251 ADAMTSL3P82987 1691 aa17.77■□□□□ 0.44
CACNA1D-207ENST00000498251 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
CACNA1D-207ENST00000498251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
CACNA1D-207ENST00000498251 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
CACNA1D-207ENST00000498251 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
CACNA1D-207ENST00000498251 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
CACNA1D-207ENST00000498251 ATP10BO94823 1461 aa17.75■□□□□ 0.43
CACNA1D-207ENST00000498251 PCF11O94913 1555 aaKnown RBP17.73■□□□□ 0.43
CACNA1D-207ENST00000498251 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
CACNA1D-207ENST00000498251 BCORL1Q5H9F3 1711 aa17.7■□□□□ 0.42
CACNA1D-207ENST00000498251 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
CACNA1D-207ENST00000498251 FRMPD1Q5SYB0 1578 aa17.69■□□□□ 0.42
CACNA1D-207ENST00000498251 MLECQ14165 292 aa17.68■□□□□ 0.42
CACNA1D-207ENST00000498251 ABCA9Q8IUA7 1624 aa17.68■□□□□ 0.42
CACNA1D-207ENST00000498251 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
CACNA1D-207ENST00000498251 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
CACNA1D-207ENST00000498251 NEO1Q92859 1461 aa17.62■□□□□ 0.41
CACNA1D-207ENST00000498251 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
CACNA1D-207ENST00000498251 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
CACNA1D-207ENST00000498251 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
CACNA1D-207ENST00000498251 RAPGEF6Q8TEU7 1601 aa17.59■□□□□ 0.41
CACNA1D-207ENST00000498251 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.41
CACNA1D-207ENST00000498251 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
CACNA1D-207ENST00000498251 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
CACNA1D-207ENST00000498251 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
CACNA1D-207ENST00000498251 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
CACNA1D-207ENST00000498251 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
CACNA1D-207ENST00000498251 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
CACNA1D-207ENST00000498251 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
CACNA1D-207ENST00000498251 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
CACNA1D-207ENST00000498251 CEBPAP49715 358 aaPredicted RBP17.53■□□□□ 0.4
CACNA1D-207ENST00000498251 FANCAO15360 1455 aa17.52■□□□□ 0.4
CACNA1D-207ENST00000498251 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
CACNA1D-207ENST00000498251 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
CACNA1D-207ENST00000498251 ZFYVE16Q7Z3T8 1539 aa17.5■□□□□ 0.39
CACNA1D-207ENST00000498251 POGZQ7Z3K3 1410 aa17.49■□□□□ 0.39
CACNA1D-207ENST00000498251 TTC37Q6PGP7 1564 aa17.48■□□□□ 0.39
CACNA1D-207ENST00000498251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1D-207ENST00000498251 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms