RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
CHRNA4-206ENST00000498043 TRIM26Q12899 539 aaPredicted RBP27.87■■■□□ 2.05
CHRNA4-206ENST00000498043 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
CHRNA4-206ENST00000498043 TTBK1Q5TCY1 1321 aaPredicted RBP27.75■■■□□ 2.03
CHRNA4-206ENST00000498043 EFCAB5A4FU69 1503 aa27.73■■■□□ 2.03
CHRNA4-206ENST00000498043 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
CHRNA4-206ENST00000498043 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
CHRNA4-206ENST00000498043 FHOD3Q2V2M9 1422 aa27.64■■■□□ 2.02
CHRNA4-206ENST00000498043 IQGAP2Q13576 1575 aa27.64■■■□□ 2.02
CHRNA4-206ENST00000498043 P3H3Q8IVL6 736 aa27.64■■■□□ 2.01
CHRNA4-206ENST00000498043 SAMD9Q5K651 1589 aa27.64■■■□□ 2.01
CHRNA4-206ENST00000498043 APLP2Q06481 763 aa27.63■■■□□ 2.01
CHRNA4-206ENST00000498043 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
CHRNA4-206ENST00000498043 PCF11O94913 1555 aaKnown RBP27.57■■■□□ 2
CHRNA4-206ENST00000498043 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
CHRNA4-206ENST00000498043 CEP170Q5SW79 1584 aa27.52■■■□□ 2
CHRNA4-206ENST00000498043 FBLN2P98095 1184 aa27.52■■■□□ 2
CHRNA4-206ENST00000498043 KIAA0586Q9BVV6 1533 aa27.5■■□□□ 1.99
CHRNA4-206ENST00000498043 UGGT2Q9NYU1 1516 aa27.46■■□□□ 1.99
CHRNA4-206ENST00000498043 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
CHRNA4-206ENST00000498043 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
CHRNA4-206ENST00000498043 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
CHRNA4-206ENST00000498043 CFAP43Q8NDM7 1665 aa27.42■■□□□ 1.98
CHRNA4-206ENST00000498043 NUP160Q12769 1436 aa27.42■■□□□ 1.98
CHRNA4-206ENST00000498043 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
CHRNA4-206ENST00000498043 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
CHRNA4-206ENST00000498043 CHD1O14646 1710 aa27.4■■□□□ 1.98
CHRNA4-206ENST00000498043 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
CHRNA4-206ENST00000498043 KIAA0556O60303 1618 aa27.37■■□□□ 1.97
CHRNA4-206ENST00000498043 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
CHRNA4-206ENST00000498043 DISP1Q96F81 1524 aa27.34■■□□□ 1.97
CHRNA4-206ENST00000498043 LRRIQ1Q96JM4 1722 aa27.31■■□□□ 1.96
CHRNA4-206ENST00000498043 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
CHRNA4-206ENST00000498043 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
CHRNA4-206ENST00000498043 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
CHRNA4-206ENST00000498043 HRCP23327 699 aa27.16■■□□□ 1.94
CHRNA4-206ENST00000498043 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
CHRNA4-206ENST00000498043 CCDC18Q5T9S5 1454 aa27.13■■□□□ 1.93
CHRNA4-206ENST00000498043 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
CHRNA4-206ENST00000498043 RRBP1Q9P2E9 1410 aaKnown RBP27.1■■□□□ 1.93
CHRNA4-206ENST00000498043 EPRSP07814 1512 aaKnown RBP27.09■■□□□ 1.93
CHRNA4-206ENST00000498043 CDK13Q14004 1512 aaKnown RBP27.08■■□□□ 1.93
CHRNA4-206ENST00000498043 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
CHRNA4-206ENST00000498043 MTUS2Q5JR59 1369 aa27.07■■□□□ 1.92
CHRNA4-206ENST00000498043 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
CHRNA4-206ENST00000498043 PHLDB1Q86UU1 1377 aa27.06■■□□□ 1.92
CHRNA4-206ENST00000498043 EHBP1L1Q8N3D4 1523 aa27.05■■□□□ 1.92
CHRNA4-206ENST00000498043 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
CHRNA4-206ENST00000498043 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
CHRNA4-206ENST00000498043 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
CHRNA4-206ENST00000498043 PLB1Q6P1J6 1458 aa27.02■■□□□ 1.92
CHRNA4-206ENST00000498043 CCNB3Q8WWL7 1395 aa27.02■■□□□ 1.92
CHRNA4-206ENST00000498043 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
CHRNA4-206ENST00000498043 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
CHRNA4-206ENST00000498043 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
CHRNA4-206ENST00000498043 NCOA2Q15596 1464 aa26.94■■□□□ 1.9
CHRNA4-206ENST00000498043 ABCA8O94911 1581 aa26.93■■□□□ 1.9
CHRNA4-206ENST00000498043 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
CHRNA4-206ENST00000498043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
CHRNA4-206ENST00000498043 PTPRGP23470 1445 aa26.87■■□□□ 1.89
CHRNA4-206ENST00000498043 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
CHRNA4-206ENST00000498043 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
CHRNA4-206ENST00000498043 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
CHRNA4-206ENST00000498043 ITGAEP38570 1179 aa26.82■■□□□ 1.88
CHRNA4-206ENST00000498043 FAM50AQ14320 339 aaKnown RBP26.82■■□□□ 1.88
CHRNA4-206ENST00000498043 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
CHRNA4-206ENST00000498043 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
CHRNA4-206ENST00000498043 ATP10BO94823 1461 aa26.74■■□□□ 1.87
CHRNA4-206ENST00000498043 TROQ12816 1431 aaPredicted RBP26.74■■□□□ 1.87
CHRNA4-206ENST00000498043 PTPN23Q9H3S7 1636 aa26.73■■□□□ 1.87
CHRNA4-206ENST00000498043 UACAQ9BZF9 1416 aa26.73■■□□□ 1.87
CHRNA4-206ENST00000498043 ZEB1P37275 1124 aaPredicted RBP26.72■■□□□ 1.87
CHRNA4-206ENST00000498043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.72■■□□□ 1.87
CHRNA4-206ENST00000498043 ADCY10Q96PN6 1610 aa26.71■■□□□ 1.87
CHRNA4-206ENST00000498043 KIF14Q15058 1648 aa26.7■■□□□ 1.87
CHRNA4-206ENST00000498043 ABCC2Q92887 1545 aa26.68■■□□□ 1.86
CHRNA4-206ENST00000498043 TCOF1Q13428 1488 aaKnown RBP26.63■■□□□ 1.85
CHRNA4-206ENST00000498043 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
CHRNA4-206ENST00000498043 MIA2Q96PC5 1412 aa26.61■■□□□ 1.85
CHRNA4-206ENST00000498043 ITSN2Q9NZM3 1697 aa26.6■■□□□ 1.85
CHRNA4-206ENST00000498043 PLEKHD1A6NEE1 506 aa26.59■■□□□ 1.85
CHRNA4-206ENST00000498043 PTPRKQ15262 1439 aa26.55■■□□□ 1.84
CHRNA4-206ENST00000498043 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
CHRNA4-206ENST00000498043 RAB3GAP2Q9H2M9 1393 aa26.55■■□□□ 1.84
CHRNA4-206ENST00000498043 ZCCHC11Q5TAX3 1644 aaKnown RBP26.55■■□□□ 1.84
CHRNA4-206ENST00000498043 SETD5Q9C0A6 1442 aa26.53■■□□□ 1.84
CHRNA4-206ENST00000498043 CDC42BPAQ5VT25 1732 aa26.52■■□□□ 1.84
CHRNA4-206ENST00000498043 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
CHRNA4-206ENST00000498043 ABCC10Q5T3U5 1492 aa26.51■■□□□ 1.83
CHRNA4-206ENST00000498043 DHX57Q6P158 1386 aaKnown RBP26.48■■□□□ 1.83
CHRNA4-206ENST00000498043 KDM5BQ9UGL1 1544 aa26.47■■□□□ 1.83
CHRNA4-206ENST00000498043 CAMSAP2Q08AD1 1489 aa26.46■■□□□ 1.83
CHRNA4-206ENST00000498043 ZNF644Q9H582 1327 aaPredicted RBP26.45■■□□□ 1.82
CHRNA4-206ENST00000498043 DNMT1P26358 1616 aaKnown RBP26.44■■□□□ 1.82
CHRNA4-206ENST00000498043 CFDP1Q9UEE9 299 aaPredicted RBP26.44■■□□□ 1.82
CHRNA4-206ENST00000498043 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
CHRNA4-206ENST00000498043 TTC37Q6PGP7 1564 aa26.41■■□□□ 1.82
CHRNA4-206ENST00000498043 DAPK1P53355 1430 aa26.4■■□□□ 1.82
CHRNA4-206ENST00000498043 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
CHRNA4-206ENST00000498043 GCC2Q8IWJ2 1684 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms