RNA–Protein interactions for RNA: ENST00000497520.1

HFM1-209, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 3

Gene HFM1, Length 383 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-209ENST00000497520 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
HFM1-209ENST00000497520 HAX1O00165 279 aa12.17□□□□□ -0.46
HFM1-209ENST00000497520 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
HFM1-209ENST00000497520 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
HFM1-209ENST00000497520 NUBP1P53384 320 aa12.07□□□□□ -0.48
HFM1-209ENST00000497520 EVX2Q03828 476 aa12.07□□□□□ -0.48
HFM1-209ENST00000497520 SCRIBQ14160 1630 aa12.07□□□□□ -0.48
HFM1-209ENST00000497520 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
HFM1-209ENST00000497520 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
HFM1-209ENST00000497520 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
HFM1-209ENST00000497520 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
HFM1-209ENST00000497520 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
HFM1-209ENST00000497520 CUX2O14529 1486 aa11.97□□□□□ -0.49
HFM1-209ENST00000497520 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
HFM1-209ENST00000497520 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.49
HFM1-209ENST00000497520 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
HFM1-209ENST00000497520 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
HFM1-209ENST00000497520 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
HFM1-209ENST00000497520 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
HFM1-209ENST00000497520 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
HFM1-209ENST00000497520 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
HFM1-209ENST00000497520 GSE1Q14687 1217 aa11.89□□□□□ -0.51
HFM1-209ENST00000497520 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
HFM1-209ENST00000497520 GABBR2O75899 941 aa11.82□□□□□ -0.52
HFM1-209ENST00000497520 PYGBP11216 843 aa11.82□□□□□ -0.52
HFM1-209ENST00000497520 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
HFM1-209ENST00000497520 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
HFM1-209ENST00000497520 MAP3K13O43283 966 aa11.78□□□□□ -0.52
HFM1-209ENST00000497520 CLCN6P51797 869 aa11.77□□□□□ -0.53
HFM1-209ENST00000497520 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
HFM1-209ENST00000497520 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
HFM1-209ENST00000497520 CHRM1P11229 460 aaPredicted RBP11.73□□□□□ -0.53
HFM1-209ENST00000497520 PKD2Q13563 968 aa11.73□□□□□ -0.53
HFM1-209ENST00000497520 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
HFM1-209ENST00000497520 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
HFM1-209ENST00000497520 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
HFM1-209ENST00000497520 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
HFM1-209ENST00000497520 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
HFM1-209ENST00000497520 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
HFM1-209ENST00000497520 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
HFM1-209ENST00000497520 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
HFM1-209ENST00000497520 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
HFM1-209ENST00000497520 NESP48681 1621 aa11.62□□□□□ -0.55
HFM1-209ENST00000497520 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
HFM1-209ENST00000497520 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
HFM1-209ENST00000497520 NCAPD3P42695 1498 aa11.6□□□□□ -0.55
HFM1-209ENST00000497520 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
HFM1-209ENST00000497520 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
HFM1-209ENST00000497520 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
HFM1-209ENST00000497520 RGL2O15211 777 aa11.58□□□□□ -0.56
HFM1-209ENST00000497520 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
HFM1-209ENST00000497520 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
HFM1-209ENST00000497520 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
HFM1-209ENST00000497520 TIE1P35590 1138 aa11.56□□□□□ -0.56
HFM1-209ENST00000497520 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
HFM1-209ENST00000497520 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
HFM1-209ENST00000497520 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
HFM1-209ENST00000497520 PSEN1P49768 467 aa11.53□□□□□ -0.56
HFM1-209ENST00000497520 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
HFM1-209ENST00000497520 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
HFM1-209ENST00000497520 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
HFM1-209ENST00000497520 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
HFM1-209ENST00000497520 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
HFM1-209ENST00000497520 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
HFM1-209ENST00000497520 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
HFM1-209ENST00000497520 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
HFM1-209ENST00000497520 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
HFM1-209ENST00000497520 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
HFM1-209ENST00000497520 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.57
HFM1-209ENST00000497520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
HFM1-209ENST00000497520 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
HFM1-209ENST00000497520 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
HFM1-209ENST00000497520 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
HFM1-209ENST00000497520 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
HFM1-209ENST00000497520 STK25O00506 426 aa11.39□□□□□ -0.59
HFM1-209ENST00000497520 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
HFM1-209ENST00000497520 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
HFM1-209ENST00000497520 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
HFM1-209ENST00000497520 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
HFM1-209ENST00000497520 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
HFM1-209ENST00000497520 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
HFM1-209ENST00000497520 WDR62O43379 1518 aa11.36□□□□□ -0.59
HFM1-209ENST00000497520 C7P10643 843 aa11.35□□□□□ -0.59
HFM1-209ENST00000497520 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
HFM1-209ENST00000497520 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
HFM1-209ENST00000497520 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
HFM1-209ENST00000497520 IER5LQ5T953 404 aa11.33□□□□□ -0.6
HFM1-209ENST00000497520 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
HFM1-209ENST00000497520 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
HFM1-209ENST00000497520 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
HFM1-209ENST00000497520 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
HFM1-209ENST00000497520 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
HFM1-209ENST00000497520 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
HFM1-209ENST00000497520 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
HFM1-209ENST00000497520 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
HFM1-209ENST00000497520 SEC24BO95487 1268 aa11.29□□□□□ -0.6
HFM1-209ENST00000497520 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
HFM1-209ENST00000497520 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
HFM1-209ENST00000497520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
HFM1-209ENST00000497520 PLCG2P16885 1265 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms