RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
SIK3-213ENST00000497049 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
SIK3-213ENST00000497049 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
SIK3-213ENST00000497049 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
SIK3-213ENST00000497049 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
SIK3-213ENST00000497049 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
SIK3-213ENST00000497049 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
SIK3-213ENST00000497049 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
SIK3-213ENST00000497049 ATAD2BQ9ULI0 1458 aa11.17□□□□□ -0.62
SIK3-213ENST00000497049 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
SIK3-213ENST00000497049 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
SIK3-213ENST00000497049 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
SIK3-213ENST00000497049 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
SIK3-213ENST00000497049 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
SIK3-213ENST00000497049 CC2D2AQ9P2K1 1620 aa11.12□□□□□ -0.63
SIK3-213ENST00000497049 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
SIK3-213ENST00000497049 WIZO95785 1651 aa11.08□□□□□ -0.64
SIK3-213ENST00000497049 NUBP1P53384 320 aa11.06□□□□□ -0.64
SIK3-213ENST00000497049 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
SIK3-213ENST00000497049 HAX1O00165 279 aa11.05□□□□□ -0.64
SIK3-213ENST00000497049 GSE1Q14687 1217 aa11.05□□□□□ -0.64
SIK3-213ENST00000497049 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
SIK3-213ENST00000497049 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
SIK3-213ENST00000497049 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
SIK3-213ENST00000497049 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
SIK3-213ENST00000497049 TRIM41Q8WV44 630 aa11□□□□□ -0.65
SIK3-213ENST00000497049 CLCN6P51797 869 aa10.99□□□□□ -0.65
SIK3-213ENST00000497049 RASEFQ8IZ41 740 aa10.99□□□□□ -0.65
SIK3-213ENST00000497049 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
SIK3-213ENST00000497049 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
SIK3-213ENST00000497049 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
SIK3-213ENST00000497049 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
SIK3-213ENST00000497049 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
SIK3-213ENST00000497049 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
SIK3-213ENST00000497049 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
SIK3-213ENST00000497049 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
SIK3-213ENST00000497049 EVX2Q03828 476 aa10.89□□□□□ -0.67
SIK3-213ENST00000497049 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
SIK3-213ENST00000497049 SGIP1Q9BQI5 828 aa10.87□□□□□ -0.67
SIK3-213ENST00000497049 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
SIK3-213ENST00000497049 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
SIK3-213ENST00000497049 CFTRP13569 1480 aa10.81□□□□□ -0.68
SIK3-213ENST00000497049 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
SIK3-213ENST00000497049 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
SIK3-213ENST00000497049 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
SIK3-213ENST00000497049 PYGBP11216 843 aa10.79□□□□□ -0.68
SIK3-213ENST00000497049 PKD2Q13563 968 aa10.79□□□□□ -0.68
SIK3-213ENST00000497049 ZNF467Q7Z7K2 595 aaPredicted RBP10.79□□□□□ -0.68
SIK3-213ENST00000497049 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
SIK3-213ENST00000497049 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
SIK3-213ENST00000497049 MAP3K13O43283 966 aa10.74□□□□□ -0.69
SIK3-213ENST00000497049 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
SIK3-213ENST00000497049 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
SIK3-213ENST00000497049 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
SIK3-213ENST00000497049 NESP48681 1621 aa10.73□□□□□ -0.69
SIK3-213ENST00000497049 GABBR2O75899 941 aa10.71□□□□□ -0.69
SIK3-213ENST00000497049 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
SIK3-213ENST00000497049 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
SIK3-213ENST00000497049 VGFO15240 615 aaPredicted RBP10.67□□□□□ -0.7
SIK3-213ENST00000497049 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
SIK3-213ENST00000497049 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
SIK3-213ENST00000497049 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
SIK3-213ENST00000497049 TIE1P35590 1138 aa10.65□□□□□ -0.7
SIK3-213ENST00000497049 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.7
SIK3-213ENST00000497049 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
SIK3-213ENST00000497049 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
SIK3-213ENST00000497049 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
SIK3-213ENST00000497049 RGL2O15211 777 aa10.61□□□□□ -0.71
SIK3-213ENST00000497049 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
SIK3-213ENST00000497049 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
SIK3-213ENST00000497049 WRNQ14191 1432 aaPredicted RBP eCLIP10.59□□□□□ -0.71
SIK3-213ENST00000497049 PSEN1P49768 467 aa10.59□□□□□ -0.71
SIK3-213ENST00000497049 ERCC6Q03468 1493 aa10.59□□□□□ -0.71
SIK3-213ENST00000497049 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
SIK3-213ENST00000497049 TMEM106CQ9BVX2 250 aa10.56□□□□□ -0.72
SIK3-213ENST00000497049 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
SIK3-213ENST00000497049 LHX8Q68G74 356 aa10.54□□□□□ -0.72
SIK3-213ENST00000497049 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
SIK3-213ENST00000497049 MRC2Q9UBG0 1479 aa10.54□□□□□ -0.72
SIK3-213ENST00000497049 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
SIK3-213ENST00000497049 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
SIK3-213ENST00000497049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
SIK3-213ENST00000497049 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.73
SIK3-213ENST00000497049 CUX1P39880 1505 aa10.52□□□□□ -0.73
SIK3-213ENST00000497049 URB2Q14146 1524 aaKnown RBP10.52□□□□□ -0.73
SIK3-213ENST00000497049 STK25O00506 426 aa10.51□□□□□ -0.73
SIK3-213ENST00000497049 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
SIK3-213ENST00000497049 TOPBP1Q92547 1522 aa10.51□□□□□ -0.73
SIK3-213ENST00000497049 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
SIK3-213ENST00000497049 HS6ST3Q8IZP7 471 aa10.5□□□□□ -0.73
SIK3-213ENST00000497049 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
SIK3-213ENST00000497049 IER5LQ5T953 404 aa10.49□□□□□ -0.73
SIK3-213ENST00000497049 TOP2BQ02880 1626 aa10.48□□□□□ -0.73
SIK3-213ENST00000497049 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
SIK3-213ENST00000497049 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
SIK3-213ENST00000497049 SOGA1O94964 1423 aa10.48□□□□□ -0.73
SIK3-213ENST00000497049 SLC39A7Q92504 469 aa10.47□□□□□ -0.73
SIK3-213ENST00000497049 TRIM35Q9UPQ4 493 aa10.47□□□□□ -0.73
SIK3-213ENST00000497049 WDR62O43379 1518 aa10.47□□□□□ -0.73
SIK3-213ENST00000497049 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms