RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 SLC4A1APQ9BWU0 796 aaKnown RBP7.19□□□□□ -1.26
PALMD-202ENST00000496843 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
PALMD-202ENST00000496843 ZRSR1Q15695 479 aaKnown RBP7.19□□□□□ -1.26
PALMD-202ENST00000496843 NOP58Q9Y2X3 529 aaKnown RBP7.16□□□□□ -1.26
PALMD-202ENST00000496843 TULP1O00294 542 aaPredicted RBP7.16□□□□□ -1.26
PALMD-202ENST00000496843 NOC3LQ8WTT2 800 aaKnown RBP7.16□□□□□ -1.26
PALMD-202ENST00000496843 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
PALMD-202ENST00000496843 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.26
PALMD-202ENST00000496843 NEUROD1Q13562 356 aa7.14□□□□□ -1.27
PALMD-202ENST00000496843 PLCB2Q00722 1185 aa7.14□□□□□ -1.27
PALMD-202ENST00000496843 UBTFP17480 764 aaKnown RBP7.13□□□□□ -1.27
PALMD-202ENST00000496843 GOLGA6L4A6NEF3 574 aa7.13□□□□□ -1.27
PALMD-202ENST00000496843 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.13□□□□□ -1.27
PALMD-202ENST00000496843 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
PALMD-202ENST00000496843 TAF7LQ5H9L4 462 aa7.12□□□□□ -1.27
PALMD-202ENST00000496843 KIAA2012Q0VF49 1180 aa7.12□□□□□ -1.27
PALMD-202ENST00000496843 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
PALMD-202ENST00000496843 CCDC9Q9Y3X0 531 aaKnown RBP7.11□□□□□ -1.27
PALMD-202ENST00000496843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.11□□□□□ -1.27
PALMD-202ENST00000496843 PDIA4P13667 645 aaKnown RBP7.09□□□□□ -1.27
PALMD-202ENST00000496843 TRIM41Q8WV44 630 aa7.09□□□□□ -1.27
PALMD-202ENST00000496843 HNRNPUL2Q1KMD3 747 aaKnown RBP7.09□□□□□ -1.27
PALMD-202ENST00000496843 RRP12Q5JTH9 1297 aaKnown RBP7.09□□□□□ -1.27
PALMD-202ENST00000496843 TIMELESSQ9UNS1 1208 aa7.08□□□□□ -1.28
PALMD-202ENST00000496843 ITGAEP38570 1179 aa7.07□□□□□ -1.28
PALMD-202ENST00000496843 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
PALMD-202ENST00000496843 TAF3Q5VWG9 929 aa7.06□□□□□ -1.28
PALMD-202ENST00000496843 MAP7D2Q96T17 732 aa7.06□□□□□ -1.28
PALMD-202ENST00000496843 CCDC66A2RUB6 948 aa7.05□□□□□ -1.28
PALMD-202ENST00000496843 RDXP35241 583 aaKnown RBP7.04□□□□□ -1.28
PALMD-202ENST00000496843 TEX35Q5T0J7 233 aa7.04□□□□□ -1.28
PALMD-202ENST00000496843 DRC7Q8IY82 874 aa7.04□□□□□ -1.28
PALMD-202ENST00000496843 HNRNPUQ00839 825 aaKnown RBP eCLIP7.03□□□□□ -1.28
PALMD-202ENST00000496843 GPS2Q13227 327 aa7.03□□□□□ -1.28
PALMD-202ENST00000496843 HTATSF1O43719 755 aaKnown RBP7.02□□□□□ -1.29
PALMD-202ENST00000496843 HSP90B1P14625 803 aaKnown RBP7.02□□□□□ -1.29
PALMD-202ENST00000496843 CCDC191Q8NCU4 936 aa7.02□□□□□ -1.29
PALMD-202ENST00000496843 TPRNQ4KMQ1 711 aa7.01□□□□□ -1.29
PALMD-202ENST00000496843 HMMRO75330 724 aa7.01□□□□□ -1.29
PALMD-202ENST00000496843 LMOD2Q6P5Q4 547 aa7.01□□□□□ -1.29
PALMD-202ENST00000496843 CC2D1BQ5T0F9 858 aaKnown RBP7□□□□□ -1.29
PALMD-202ENST00000496843 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
PALMD-202ENST00000496843 DYDC1Q8WWB3 177 aa7□□□□□ -1.29
PALMD-202ENST00000496843 ANO8Q9HCE9 1232 aaPredicted RBP7□□□□□ -1.29
PALMD-202ENST00000496843 MTERF4Q7Z6M4 381 aaKnown RBP7□□□□□ -1.29
PALMD-202ENST00000496843 CWC15Q9P013 229 aaKnown RBP7□□□□□ -1.29
PALMD-202ENST00000496843 ZBTB7CA1YPR0 619 aa6.99□□□□□ -1.29
PALMD-202ENST00000496843 SSR1P43307 286 aaKnown RBP6.99□□□□□ -1.29
PALMD-202ENST00000496843 TMX4Q9H1E5 349 aaPredicted RBP6.98□□□□□ -1.29
PALMD-202ENST00000496843 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
PALMD-202ENST00000496843 WDR43Q15061 677 aaKnown RBP eCLIP6.97□□□□□ -1.29
PALMD-202ENST00000496843 OS9Q13438 667 aaPredicted RBP6.96□□□□□ -1.29
PALMD-202ENST00000496843 AEBP1Q8IUX7 1158 aa6.96□□□□□ -1.29
PALMD-202ENST00000496843 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.29
PALMD-202ENST00000496843 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
PALMD-202ENST00000496843 UBE2Q2Q8WVN8 375 aa6.96□□□□□ -1.3
PALMD-202ENST00000496843 H0YHG0 523 aa6.95□□□□□ -1.3
PALMD-202ENST00000496843 MYH16Q9H6N6 1097 aa6.95□□□□□ -1.3
PALMD-202ENST00000496843 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
PALMD-202ENST00000496843 USP8P40818 1118 aa6.94□□□□□ -1.3
PALMD-202ENST00000496843 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
PALMD-202ENST00000496843 PSMD1Q99460 953 aa6.94□□□□□ -1.3
PALMD-202ENST00000496843 PAIP2Q9BPZ3 127 aaKnown RBP6.94□□□□□ -1.3
PALMD-202ENST00000496843 IRX6P78412 446 aaPredicted RBP6.93□□□□□ -1.3
PALMD-202ENST00000496843 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
PALMD-202ENST00000496843 NCBP3Q53F19 620 aaKnown RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 PAXIP1Q6ZW49 1069 aaPredicted RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 TSPYL1Q9H0U9 437 aa6.92□□□□□ -1.3
PALMD-202ENST00000496843 RBM19Q9Y4C8 960 aaKnown RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 CLGNO14967 610 aa6.92□□□□□ -1.3
PALMD-202ENST00000496843 IRX3P78415 501 aaPredicted RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 BBXQ8WY36 941 aaPredicted RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
PALMD-202ENST00000496843 CASC1Q6TDU7 716 aa6.92□□□□□ -1.3
PALMD-202ENST00000496843 GBP4Q96PP9 640 aa6.91□□□□□ -1.3
PALMD-202ENST00000496843 BCCIPQ9P287 314 aaKnown RBP eCLIP6.91□□□□□ -1.3
PALMD-202ENST00000496843 TMCO5BA8MYB1 307 aa6.91□□□□□ -1.3
PALMD-202ENST00000496843 WWC1Q8IX03 1113 aa6.91□□□□□ -1.3
PALMD-202ENST00000496843 FAM9BQ8IZU0 186 aa6.91□□□□□ -1.3
PALMD-202ENST00000496843 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
PALMD-202ENST00000496843 MAPK8IP2Q13387 824 aaPredicted RBP6.9□□□□□ -1.3
PALMD-202ENST00000496843 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
PALMD-202ENST00000496843 GIMAP7Q8NHV1 300 aa6.9□□□□□ -1.3
PALMD-202ENST00000496843 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
PALMD-202ENST00000496843 HSCBQ8IWL3 235 aa6.9□□□□□ -1.31
PALMD-202ENST00000496843 SYAP1Q96A49 352 aaPredicted RBP6.9□□□□□ -1.31
PALMD-202ENST00000496843 RRP9O43818 475 aaKnown RBP6.9□□□□□ -1.31
PALMD-202ENST00000496843 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.31
PALMD-202ENST00000496843 DCTN1Q14203 1278 aa6.89□□□□□ -1.31
PALMD-202ENST00000496843 CHMP3Q9Y3E7 222 aa6.89□□□□□ -1.31
PALMD-202ENST00000496843 CDR1P51861 262 aa6.89□□□□□ -1.31
PALMD-202ENST00000496843 GZF1Q9H116 711 aaPredicted RBP6.89□□□□□ -1.31
PALMD-202ENST00000496843 PLEKHG5O94827 1062 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 TPM2P07951 284 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 TPM3P06753 285 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 PAF1Q8N7H5 531 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 ACBD3Q9H3P7 528 aa6.88□□□□□ -1.31
PALMD-202ENST00000496843 SETSIPP0DME0 302 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms