RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
SH3D21-204ENST00000496636 FAM69CQ0P6D2 419 aa17.57■□□□□ 0.4
SH3D21-204ENST00000496636 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
SH3D21-204ENST00000496636 DIP2BQ9P265 1576 aa17.55■□□□□ 0.4
SH3D21-204ENST00000496636 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
SH3D21-204ENST00000496636 KDM6BO15054 1643 aa17.51■□□□□ 0.39
SH3D21-204ENST00000496636 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
SH3D21-204ENST00000496636 KDM4FA0A1W2PPD8 638 aa17.45■□□□□ 0.38
SH3D21-204ENST00000496636 KIAA0586Q9BVV6 1533 aa17.41■□□□□ 0.38
SH3D21-204ENST00000496636 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
SH3D21-204ENST00000496636 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
SH3D21-204ENST00000496636 PTPRGP23470 1445 aa17.31■□□□□ 0.36
SH3D21-204ENST00000496636 TSPOAP1O95153 1857 aa17.31■□□□□ 0.36
SH3D21-204ENST00000496636 CUL7Q14999 1698 aa17.31■□□□□ 0.36
SH3D21-204ENST00000496636 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
SH3D21-204ENST00000496636 PLB1Q6P1J6 1458 aa17.3■□□□□ 0.36
SH3D21-204ENST00000496636 GLI2P10070 1586 aa17.29■□□□□ 0.36
SH3D21-204ENST00000496636 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
SH3D21-204ENST00000496636 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
SH3D21-204ENST00000496636 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
SH3D21-204ENST00000496636 ASXL2Q76L83 1435 aa17.27■□□□□ 0.35
SH3D21-204ENST00000496636 IGF1RP08069 1367 aa17.27■□□□□ 0.35
SH3D21-204ENST00000496636 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
SH3D21-204ENST00000496636 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
SH3D21-204ENST00000496636 PPRC1Q5VV67 1664 aaKnown RBP17.21■□□□□ 0.35
SH3D21-204ENST00000496636 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
SH3D21-204ENST00000496636 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
SH3D21-204ENST00000496636 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
SH3D21-204ENST00000496636 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
SH3D21-204ENST00000496636 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
SH3D21-204ENST00000496636 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
SH3D21-204ENST00000496636 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
SH3D21-204ENST00000496636 TTBK1Q5TCY1 1321 aaPredicted RBP17.15■□□□□ 0.34
SH3D21-204ENST00000496636 MAP3K4Q9Y6R4 1608 aa17.14■□□□□ 0.33
SH3D21-204ENST00000496636 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
SH3D21-204ENST00000496636 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
SH3D21-204ENST00000496636 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
SH3D21-204ENST00000496636 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
SH3D21-204ENST00000496636 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
SH3D21-204ENST00000496636 MAGI3Q5TCQ9 1506 aa17.01■□□□□ 0.31
SH3D21-204ENST00000496636 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
SH3D21-204ENST00000496636 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
SH3D21-204ENST00000496636 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
SH3D21-204ENST00000496636 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
SH3D21-204ENST00000496636 CFAP43Q8NDM7 1665 aa16.96■□□□□ 0.31
SH3D21-204ENST00000496636 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
SH3D21-204ENST00000496636 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SH3D21-204ENST00000496636 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
SH3D21-204ENST00000496636 ABCA8O94911 1581 aa16.88■□□□□ 0.29
SH3D21-204ENST00000496636 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
SH3D21-204ENST00000496636 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
SH3D21-204ENST00000496636 PTPRMP28827 1452 aa16.83■□□□□ 0.28
SH3D21-204ENST00000496636 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
SH3D21-204ENST00000496636 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
SH3D21-204ENST00000496636 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
SH3D21-204ENST00000496636 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
SH3D21-204ENST00000496636 NEO1Q92859 1461 aa16.76■□□□□ 0.27
SH3D21-204ENST00000496636 ABCA9Q8IUA7 1624 aa16.75■□□□□ 0.27
SH3D21-204ENST00000496636 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
SH3D21-204ENST00000496636 BCORL1Q5H9F3 1711 aa16.71■□□□□ 0.27
SH3D21-204ENST00000496636 ATP10BO94823 1461 aa16.71■□□□□ 0.27
SH3D21-204ENST00000496636 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
SH3D21-204ENST00000496636 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
SH3D21-204ENST00000496636 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
SH3D21-204ENST00000496636 ARHGEF40Q8TER5 1519 aa16.68■□□□□ 0.26
SH3D21-204ENST00000496636 ARID4BQ4LE39 1312 aaPredicted RBP16.68■□□□□ 0.26
SH3D21-204ENST00000496636 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
SH3D21-204ENST00000496636 ARID3CA6NKF2 412 aa16.64■□□□□ 0.25
SH3D21-204ENST00000496636 POGZQ7Z3K3 1410 aa16.62■□□□□ 0.25
SH3D21-204ENST00000496636 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
SH3D21-204ENST00000496636 FANCAO15360 1455 aa16.61■□□□□ 0.25
SH3D21-204ENST00000496636 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
SH3D21-204ENST00000496636 RIMS1Q86UR5 1692 aaKnown RBP16.6■□□□□ 0.25
SH3D21-204ENST00000496636 AKNAQ7Z591 1439 aa16.6■□□□□ 0.25
SH3D21-204ENST00000496636 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
SH3D21-204ENST00000496636 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
SH3D21-204ENST00000496636 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.24
SH3D21-204ENST00000496636 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
SH3D21-204ENST00000496636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
SH3D21-204ENST00000496636 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
SH3D21-204ENST00000496636 EFCAB5A4FU69 1503 aa16.55■□□□□ 0.24
SH3D21-204ENST00000496636 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
SH3D21-204ENST00000496636 HSPA2P54652 639 aa16.55■□□□□ 0.24
SH3D21-204ENST00000496636 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
SH3D21-204ENST00000496636 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
SH3D21-204ENST00000496636 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
SH3D21-204ENST00000496636 RICTORQ6R327 1708 aa16.54■□□□□ 0.24
SH3D21-204ENST00000496636 ZFYVE16Q7Z3T8 1539 aa16.54■□□□□ 0.24
SH3D21-204ENST00000496636 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
SH3D21-204ENST00000496636 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
SH3D21-204ENST00000496636 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
SH3D21-204ENST00000496636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3D21-204ENST00000496636 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
SH3D21-204ENST00000496636 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
SH3D21-204ENST00000496636 FER1L4A9Z1Z3 1794 aa16.45■□□□□ 0.22
SH3D21-204ENST00000496636 ARHGEF12Q9NZN5 1544 aa16.44■□□□□ 0.22
SH3D21-204ENST00000496636 SOCS7O14512 581 aa16.43■□□□□ 0.22
SH3D21-204ENST00000496636 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
SH3D21-204ENST00000496636 HECW1Q76N89 1606 aa16.43■□□□□ 0.22
SH3D21-204ENST00000496636 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms