RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 WDR62O43379 1518 aa25.92■■□□□ 1.74
GABBR1-220ENST00000494877 CTTNBP2Q8WZ74 1663 aa25.92■■□□□ 1.74
GABBR1-220ENST00000494877 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
GABBR1-220ENST00000494877 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
GABBR1-220ENST00000494877 TIAM1Q13009 1591 aa25.85■■□□□ 1.73
GABBR1-220ENST00000494877 RRBP1Q9P2E9 1410 aaKnown RBP25.85■■□□□ 1.73
GABBR1-220ENST00000494877 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
GABBR1-220ENST00000494877 P3H3Q8IVL6 736 aa25.81■■□□□ 1.72
GABBR1-220ENST00000494877 FHOD3Q2V2M9 1422 aa25.79■■□□□ 1.72
GABBR1-220ENST00000494877 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
GABBR1-220ENST00000494877 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.729e-7■■■■■ 29.9
GABBR1-220ENST00000494877 PCF11O94913 1555 aaKnown RBP25.77■■□□□ 1.72
GABBR1-220ENST00000494877 LRRC9Q6ZRR7 1453 aa25.75■■□□□ 1.71
GABBR1-220ENST00000494877 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
GABBR1-220ENST00000494877 FYCO1Q9BQS8 1478 aa25.74■■□□□ 1.71
GABBR1-220ENST00000494877 CCNB3Q8WWL7 1395 aa25.74■■□□□ 1.71
GABBR1-220ENST00000494877 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
GABBR1-220ENST00000494877 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
GABBR1-220ENST00000494877 CASKIN1Q8WXD9 1431 aa25.73■■□□□ 1.71
GABBR1-220ENST00000494877 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
GABBR1-220ENST00000494877 SAMD9Q5K651 1589 aa25.7■■□□□ 1.7
GABBR1-220ENST00000494877 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
GABBR1-220ENST00000494877 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
GABBR1-220ENST00000494877 ATP1B4Q9UN42 357 aaPredicted RBP25.64■■□□□ 1.7
GABBR1-220ENST00000494877 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
GABBR1-220ENST00000494877 SNAPC4Q5SXM2 1469 aa25.61■■□□□ 1.69
GABBR1-220ENST00000494877 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.68
GABBR1-220ENST00000494877 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
GABBR1-220ENST00000494877 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
GABBR1-220ENST00000494877 IQGAP2Q13576 1575 aa25.53■■□□□ 1.68
GABBR1-220ENST00000494877 DHX57Q6P158 1386 aaKnown RBP25.51■■□□□ 1.67
GABBR1-220ENST00000494877 ITGAEP38570 1179 aa25.47■■□□□ 1.67
GABBR1-220ENST00000494877 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
GABBR1-220ENST00000494877 MTUS2Q5JR59 1369 aa25.43■■□□□ 1.66
GABBR1-220ENST00000494877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.663e-13■■□□□ 11.8
GABBR1-220ENST00000494877 UGGT2Q9NYU1 1516 aa25.41■■□□□ 1.66
GABBR1-220ENST00000494877 FAM50AQ14320 339 aaKnown RBP25.41■■□□□ 1.66
GABBR1-220ENST00000494877 FBLN2P98095 1184 aa25.39■■□□□ 1.65
GABBR1-220ENST00000494877 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.65
GABBR1-220ENST00000494877 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
GABBR1-220ENST00000494877 GRIN2AQ12879 1464 aa25.37■■□□□ 1.65
GABBR1-220ENST00000494877 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
GABBR1-220ENST00000494877 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
GABBR1-220ENST00000494877 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
GABBR1-220ENST00000494877 CCDC18Q5T9S5 1454 aa25.36■■□□□ 1.65
GABBR1-220ENST00000494877 SETD5Q9C0A6 1442 aa25.35■■□□□ 1.65
GABBR1-220ENST00000494877 FGD6Q6ZV73 1430 aa25.33■■□□□ 1.65
GABBR1-220ENST00000494877 HECW1Q76N89 1606 aa25.33■■□□□ 1.65
GABBR1-220ENST00000494877 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.65
GABBR1-220ENST00000494877 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
GABBR1-220ENST00000494877 SUPT6HQ7KZ85 1726 aaKnown RBP25.3■■□□□ 1.64
GABBR1-220ENST00000494877 SYNJ2O15056 1496 aa25.3■■□□□ 1.64
GABBR1-220ENST00000494877 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
GABBR1-220ENST00000494877 EPRSP07814 1512 aaKnown RBP25.26■■□□□ 1.63
GABBR1-220ENST00000494877 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
GABBR1-220ENST00000494877 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
GABBR1-220ENST00000494877 MYOM3Q5VTT5 1437 aa25.26■■□□□ 1.63
GABBR1-220ENST00000494877 MYT1Q01538 1121 aa25.25■■□□□ 1.63
GABBR1-220ENST00000494877 MAGI3Q5TCQ9 1506 aa25.23■■□□□ 1.63
GABBR1-220ENST00000494877 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
GABBR1-220ENST00000494877 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
GABBR1-220ENST00000494877 MAPKBP1O60336 1514 aa25.16■■□□□ 1.62
GABBR1-220ENST00000494877 CDK13Q14004 1512 aaKnown RBP25.16■■□□□ 1.62
GABBR1-220ENST00000494877 NUP160Q12769 1436 aa25.14■■□□□ 1.62
GABBR1-220ENST00000494877 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
GABBR1-220ENST00000494877 PTPRKQ15262 1439 aa25.1■■□□□ 1.61
GABBR1-220ENST00000494877 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
GABBR1-220ENST00000494877 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
GABBR1-220ENST00000494877 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.61
GABBR1-220ENST00000494877 TCOF1Q13428 1488 aaKnown RBP25.08■■□□□ 1.61
GABBR1-220ENST00000494877 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
GABBR1-220ENST00000494877 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
GABBR1-220ENST00000494877 MIA2Q96PC5 1412 aa25.05■■□□□ 1.6
GABBR1-220ENST00000494877 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
GABBR1-220ENST00000494877 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
GABBR1-220ENST00000494877 NAIPQ13075 1403 aa25■■□□□ 1.59
GABBR1-220ENST00000494877 CHD1O14646 1710 aa24.97■■□□□ 1.59
GABBR1-220ENST00000494877 PLB1Q6P1J6 1458 aa24.95■■□□□ 1.58
GABBR1-220ENST00000494877 UACAQ9BZF9 1416 aa24.94■■□□□ 1.58
GABBR1-220ENST00000494877 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
GABBR1-220ENST00000494877 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
GABBR1-220ENST00000494877 AKNAQ7Z591 1439 aa24.91■■□□□ 1.58
GABBR1-220ENST00000494877 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
GABBR1-220ENST00000494877 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
GABBR1-220ENST00000494877 GCC2Q8IWJ2 1684 aa24.87■■□□□ 1.57
GABBR1-220ENST00000494877 PRG4Q92954 1404 aaPredicted RBP24.85■■□□□ 1.57
GABBR1-220ENST00000494877 CHIC2Q9UKJ5 165 aa24.85■■□□□ 1.57
GABBR1-220ENST00000494877 RRP7BPQ9NSQ0 103 aa24.85■■□□□ 1.57
GABBR1-220ENST00000494877 ABCA8O94911 1581 aa24.84■■□□□ 1.57
GABBR1-220ENST00000494877 MIER1Q8N108 512 aa24.82■■□□□ 1.56
GABBR1-220ENST00000494877 ADCY10Q96PN6 1610 aa24.81■■□□□ 1.56
GABBR1-220ENST00000494877 DAPK1P53355 1430 aa24.79■■□□□ 1.56
GABBR1-220ENST00000494877 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
GABBR1-220ENST00000494877 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
GABBR1-220ENST00000494877 ITSN2Q9NZM3 1697 aa24.77■■□□□ 1.56
GABBR1-220ENST00000494877 ABCC5O15440 1437 aa24.76■■□□□ 1.55
GABBR1-220ENST00000494877 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
GABBR1-220ENST00000494877 GPATCH8Q9UKJ3 1502 aaKnown RBP24.75■■□□□ 1.55
GABBR1-220ENST00000494877 KIF14Q15058 1648 aa24.75■■□□□ 1.55
GABBR1-220ENST00000494877 ATP10BO94823 1461 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms