RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
COL4A2-209ENST00000494852 ABCC10Q5T3U5 1492 aa28.24■■■□□ 2.11
COL4A2-209ENST00000494852 NPM1P06748 294 aaKnown RBP eCLIP28.23■■■□□ 2.11
COL4A2-209ENST00000494852 FAM69CQ0P6D2 419 aa28.22■■■□□ 2.11
COL4A2-209ENST00000494852 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
COL4A2-209ENST00000494852 KIAA0586Q9BVV6 1533 aa28.14■■■□□ 2.1
COL4A2-209ENST00000494852 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.09
COL4A2-209ENST00000494852 DIP2BQ9P265 1576 aa28.12■■■□□ 2.09
COL4A2-209ENST00000494852 IGF1RP08069 1367 aa28.11■■■□□ 2.09
COL4A2-209ENST00000494852 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
COL4A2-209ENST00000494852 CUL7Q14999 1698 aa28.05■■■□□ 2.08
COL4A2-209ENST00000494852 KDM6BO15054 1643 aa27.96■■■□□ 2.07
COL4A2-209ENST00000494852 PTPRGP23470 1445 aa27.95■■■□□ 2.07
COL4A2-209ENST00000494852 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
COL4A2-209ENST00000494852 KDM4FA0A1W2PPD8 638 aa27.89■■■□□ 2.06
COL4A2-209ENST00000494852 TSPOAP1O95153 1857 aa27.88■■■□□ 2.05
COL4A2-209ENST00000494852 TNIKQ9UKE5 1360 aa27.87■■■□□ 2.05
COL4A2-209ENST00000494852 CARMIL2Q6F5E8 1435 aa27.87■■■□□ 2.05
COL4A2-209ENST00000494852 ABCC2Q92887 1545 aa27.85■■■□□ 2.05
COL4A2-209ENST00000494852 TTBK1Q5TCY1 1321 aaPredicted RBP27.8■■■□□ 2.04
COL4A2-209ENST00000494852 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
COL4A2-209ENST00000494852 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
COL4A2-209ENST00000494852 UHRF1BP1LA0JNW5 1464 aa27.78■■■□□ 2.04
COL4A2-209ENST00000494852 ASXL2Q76L83 1435 aa27.78■■■□□ 2.04
COL4A2-209ENST00000494852 GLI2P10070 1586 aa27.77■■■□□ 2.04
COL4A2-209ENST00000494852 UACAQ9BZF9 1416 aa27.73■■■□□ 2.03
COL4A2-209ENST00000494852 PPRC1Q5VV67 1664 aaKnown RBP27.7■■■□□ 2.02
COL4A2-209ENST00000494852 DISP1Q96F81 1524 aa27.7■■■□□ 2.02
COL4A2-209ENST00000494852 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
COL4A2-209ENST00000494852 UGGT2Q9NYU1 1516 aa27.62■■■□□ 2.01
COL4A2-209ENST00000494852 EPRSP07814 1512 aaKnown RBP27.62■■■□□ 2.01
COL4A2-209ENST00000494852 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
COL4A2-209ENST00000494852 MAP3K4Q9Y6R4 1608 aa27.58■■■□□ 2.01
COL4A2-209ENST00000494852 COL17A1Q9UMD9 1497 aaPredicted RBP27.57■■■□□ 2
COL4A2-209ENST00000494852 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
COL4A2-209ENST00000494852 ADGRL1O94910 1474 aa27.55■■■□□ 2
COL4A2-209ENST00000494852 ZCCHC11Q5TAX3 1644 aaKnown RBP27.54■■■□□ 2
COL4A2-209ENST00000494852 KIAA0556O60303 1618 aa27.53■■■□□ 2
COL4A2-209ENST00000494852 WDR7Q9Y4E6 1490 aa27.45■■□□□ 1.99
COL4A2-209ENST00000494852 ILDR1Q86SU0 546 aaPredicted RBP27.4■■□□□ 1.98
COL4A2-209ENST00000494852 GOLGA3Q08378 1498 aa27.38■■□□□ 1.97
COL4A2-209ENST00000494852 CTTNBP2Q8WZ74 1663 aa27.36■■□□□ 1.97
COL4A2-209ENST00000494852 MAGI3Q5TCQ9 1506 aa27.35■■□□□ 1.97
COL4A2-209ENST00000494852 CD109Q6YHK3 1445 aa27.33■■□□□ 1.97
COL4A2-209ENST00000494852 ABCA8O94911 1581 aa27.33■■□□□ 1.97
COL4A2-209ENST00000494852 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
COL4A2-209ENST00000494852 HECW2Q9P2P5 1572 aa27.28■■□□□ 1.96
COL4A2-209ENST00000494852 KCNH8Q96L42 1107 aa27.28■■□□□ 1.96
COL4A2-209ENST00000494852 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
COL4A2-209ENST00000494852 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
COL4A2-209ENST00000494852 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
COL4A2-209ENST00000494852 ATP10BO94823 1461 aa27.11■■□□□ 1.93
COL4A2-209ENST00000494852 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
COL4A2-209ENST00000494852 KIF21BO75037 1637 aa27.08■■□□□ 1.93
COL4A2-209ENST00000494852 ARID3CA6NKF2 412 aa27.04■■□□□ 1.92
COL4A2-209ENST00000494852 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
COL4A2-209ENST00000494852 ABCA9Q8IUA7 1624 aa27.04■■□□□ 1.92
COL4A2-209ENST00000494852 SAMD9Q5K651 1589 aa26.98■■□□□ 1.91
COL4A2-209ENST00000494852 NEO1Q92859 1461 aa26.97■■□□□ 1.91
COL4A2-209ENST00000494852 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
COL4A2-209ENST00000494852 RAPGEF3O95398 923 aa26.94■■□□□ 1.9
COL4A2-209ENST00000494852 ADAMTSL3P82987 1691 aa26.94■■□□□ 1.9
COL4A2-209ENST00000494852 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
COL4A2-209ENST00000494852 PTPRMP28827 1452 aa26.93■■□□□ 1.9
COL4A2-209ENST00000494852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
COL4A2-209ENST00000494852 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
COL4A2-209ENST00000494852 NUP153P49790 1475 aaKnown RBP26.86■■□□□ 1.89
COL4A2-209ENST00000494852 FRMPD1Q5SYB0 1578 aa26.85■■□□□ 1.89
COL4A2-209ENST00000494852 FBXO41Q8TF61 875 aa26.84■■□□□ 1.89
COL4A2-209ENST00000494852 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.89
COL4A2-209ENST00000494852 ARID4BQ4LE39 1312 aaPredicted RBP26.8■■□□□ 1.88
COL4A2-209ENST00000494852 PLEKHD1A6NEE1 506 aa26.78■■□□□ 1.88
COL4A2-209ENST00000494852 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
COL4A2-209ENST00000494852 FHOD3Q2V2M9 1422 aa26.76■■□□□ 1.87
COL4A2-209ENST00000494852 DENND4BO75064 1496 aaPredicted RBP26.75■■□□□ 1.87
COL4A2-209ENST00000494852 EEA1Q15075 1411 aa26.75■■□□□ 1.87
COL4A2-209ENST00000494852 PCF11O94913 1555 aaKnown RBP26.74■■□□□ 1.87
COL4A2-209ENST00000494852 ARHGEF40Q8TER5 1519 aa26.74■■□□□ 1.87
COL4A2-209ENST00000494852 AKNAQ7Z591 1439 aa26.73■■□□□ 1.87
COL4A2-209ENST00000494852 RICTORQ6R327 1708 aa26.72■■□□□ 1.87
COL4A2-209ENST00000494852 FANCAO15360 1455 aa26.71■■□□□ 1.87
COL4A2-209ENST00000494852 LMTK3Q96Q04 1460 aa26.71■■□□□ 1.87
COL4A2-209ENST00000494852 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
COL4A2-209ENST00000494852 CFAP74Q9C0B2 1584 aa26.7■■□□□ 1.86
COL4A2-209ENST00000494852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.69■■□□□ 1.86
COL4A2-209ENST00000494852 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
COL4A2-209ENST00000494852 ZMYM4Q5VZL5 1548 aa26.65■■□□□ 1.86
COL4A2-209ENST00000494852 RIMS1Q86UR5 1692 aaKnown RBP26.64■■□□□ 1.86
COL4A2-209ENST00000494852 POGZQ7Z3K3 1410 aa26.64■■□□□ 1.85
COL4A2-209ENST00000494852 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
COL4A2-209ENST00000494852 TTC37Q6PGP7 1564 aa26.61■■□□□ 1.85
COL4A2-209ENST00000494852 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
COL4A2-209ENST00000494852 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
COL4A2-209ENST00000494852 PLCH2O75038 1416 aa26.55■■□□□ 1.84
COL4A2-209ENST00000494852 SIGLEC1Q9BZZ2 1709 aa26.53■■□□□ 1.84
COL4A2-209ENST00000494852 CDK13Q14004 1512 aaKnown RBP26.53■■□□□ 1.84
COL4A2-209ENST00000494852 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
COL4A2-209ENST00000494852 HSPA2P54652 639 aa26.52■■□□□ 1.84
COL4A2-209ENST00000494852 SCAPERQ9BY12 1400 aa26.51■■□□□ 1.83
COL4A2-209ENST00000494852 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms