RNA–Protein interactions for RNA: ENST00000494322.5

SLC11A1-217, Transcript of solute carrier family 11 member 1, humanhuman

TSL 1 (best)

Gene SLC11A1, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-217ENST00000494322 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
SLC11A1-217ENST00000494322 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
SLC11A1-217ENST00000494322 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
SLC11A1-217ENST00000494322 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
SLC11A1-217ENST00000494322 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
SLC11A1-217ENST00000494322 SAMD9Q5K651 1589 aa26.21■■□□□ 1.79
SLC11A1-217ENST00000494322 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
SLC11A1-217ENST00000494322 SYNJ2O15056 1496 aa26.18■■□□□ 1.78
SLC11A1-217ENST00000494322 IQGAP2Q13576 1575 aa26.17■■□□□ 1.78
SLC11A1-217ENST00000494322 FHOD3Q2V2M9 1422 aa26.12■■□□□ 1.77
SLC11A1-217ENST00000494322 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
SLC11A1-217ENST00000494322 PCF11O94913 1555 aaKnown RBP26.08■■□□□ 1.77
SLC11A1-217ENST00000494322 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
SLC11A1-217ENST00000494322 P3H3Q8IVL6 736 aa26.05■■□□□ 1.76
SLC11A1-217ENST00000494322 UGGT2Q9NYU1 1516 aa26.04■■□□□ 1.76
SLC11A1-217ENST00000494322 NUP160Q12769 1436 aa26.02■■□□□ 1.76
SLC11A1-217ENST00000494322 CHD1O14646 1710 aa26.02■■□□□ 1.76
SLC11A1-217ENST00000494322 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
SLC11A1-217ENST00000494322 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
SLC11A1-217ENST00000494322 CFAP43Q8NDM7 1665 aa25.97■■□□□ 1.75
SLC11A1-217ENST00000494322 TIAM1Q13009 1591 aa25.95■■□□□ 1.75
SLC11A1-217ENST00000494322 FYCO1Q9BQS8 1478 aa25.95■■□□□ 1.74
SLC11A1-217ENST00000494322 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 FBLN2P98095 1184 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 FMN1Q68DA7 1419 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 LRRIQ1Q96JM4 1722 aa25.93■■□□□ 1.74
SLC11A1-217ENST00000494322 APLP2Q06481 763 aa25.92■■□□□ 1.74
SLC11A1-217ENST00000494322 KANK4Q5T7N3 995 aaPredicted RBP25.89■■□□□ 1.73
SLC11A1-217ENST00000494322 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
SLC11A1-217ENST00000494322 HECW1Q76N89 1606 aa25.74■■□□□ 1.71
SLC11A1-217ENST00000494322 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
SLC11A1-217ENST00000494322 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
SLC11A1-217ENST00000494322 ATP1B4Q9UN42 357 aaPredicted RBP25.69■■□□□ 1.7
SLC11A1-217ENST00000494322 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
SLC11A1-217ENST00000494322 RAPGEF6Q8TEU7 1601 aa25.67■■□□□ 1.7
SLC11A1-217ENST00000494322 CARMIL2Q6F5E8 1435 aa25.66■■□□□ 1.7
SLC11A1-217ENST00000494322 CCDC18Q5T9S5 1454 aa25.64■■□□□ 1.7
SLC11A1-217ENST00000494322 EPRSP07814 1512 aaKnown RBP25.63■■□□□ 1.69
SLC11A1-217ENST00000494322 MAGI3Q5TCQ9 1506 aa25.63■■□□□ 1.69
SLC11A1-217ENST00000494322 RRBP1Q9P2E9 1410 aaKnown RBP25.62■■□□□ 1.69
SLC11A1-217ENST00000494322 CDK13Q14004 1512 aaKnown RBP25.61■■□□□ 1.69
SLC11A1-217ENST00000494322 NUP153P49790 1475 aaKnown RBP25.61■■□□□ 1.69
SLC11A1-217ENST00000494322 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
SLC11A1-217ENST00000494322 PLB1Q6P1J6 1458 aa25.58■■□□□ 1.68
SLC11A1-217ENST00000494322 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
SLC11A1-217ENST00000494322 PHLDB1Q86UU1 1377 aa25.57■■□□□ 1.68
SLC11A1-217ENST00000494322 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
SLC11A1-217ENST00000494322 ABCA8O94911 1581 aa25.55■■□□□ 1.68
SLC11A1-217ENST00000494322 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
SLC11A1-217ENST00000494322 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
SLC11A1-217ENST00000494322 HRCP23327 699 aa25.5■■□□□ 1.67
SLC11A1-217ENST00000494322 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
SLC11A1-217ENST00000494322 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
SLC11A1-217ENST00000494322 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
SLC11A1-217ENST00000494322 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
SLC11A1-217ENST00000494322 HNRNPUL2Q1KMD3 747 aaKnown RBP25.41■■□□□ 1.66
SLC11A1-217ENST00000494322 PTPRGP23470 1445 aa25.41■■□□□ 1.66
SLC11A1-217ENST00000494322 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
SLC11A1-217ENST00000494322 MYOM3Q5VTT5 1437 aa25.34■■□□□ 1.65
SLC11A1-217ENST00000494322 ADCY10Q96PN6 1610 aa25.33■■□□□ 1.65
SLC11A1-217ENST00000494322 ATP10BO94823 1461 aa25.33■■□□□ 1.65
SLC11A1-217ENST00000494322 TROQ12816 1431 aaPredicted RBP25.3■■□□□ 1.64
SLC11A1-217ENST00000494322 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
SLC11A1-217ENST00000494322 KIF14Q15058 1648 aa25.29■■□□□ 1.64
SLC11A1-217ENST00000494322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.28■■□□□ 1.64
SLC11A1-217ENST00000494322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
SLC11A1-217ENST00000494322 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
SLC11A1-217ENST00000494322 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
SLC11A1-217ENST00000494322 FAM50AQ14320 339 aaKnown RBP25.22■■□□□ 1.63
SLC11A1-217ENST00000494322 TCOF1Q13428 1488 aaKnown RBP25.22■■□□□ 1.63
SLC11A1-217ENST00000494322 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
SLC11A1-217ENST00000494322 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
SLC11A1-217ENST00000494322 UHRF1BP1LA0JNW5 1464 aa25.19■■□□□ 1.62
SLC11A1-217ENST00000494322 ITGAEP38570 1179 aa25.18■■□□□ 1.62
SLC11A1-217ENST00000494322 MIA2Q96PC5 1412 aa25.17■■□□□ 1.62
SLC11A1-217ENST00000494322 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
SLC11A1-217ENST00000494322 ZCCHC11Q5TAX3 1644 aaKnown RBP25.16■■□□□ 1.62
SLC11A1-217ENST00000494322 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
SLC11A1-217ENST00000494322 ABCC10Q5T3U5 1492 aa25.14■■□□□ 1.62
SLC11A1-217ENST00000494322 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
SLC11A1-217ENST00000494322 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
SLC11A1-217ENST00000494322 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
SLC11A1-217ENST00000494322 GPATCH8Q9UKJ3 1502 aaKnown RBP25.1■■□□□ 1.61
SLC11A1-217ENST00000494322 PLEKHD1A6NEE1 506 aa25.08■■□□□ 1.61
SLC11A1-217ENST00000494322 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
SLC11A1-217ENST00000494322 RAB3GAP2Q9H2M9 1393 aa25.03■■□□□ 1.6
SLC11A1-217ENST00000494322 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
SLC11A1-217ENST00000494322 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
SLC11A1-217ENST00000494322 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
SLC11A1-217ENST00000494322 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.59
SLC11A1-217ENST00000494322 PREX2Q70Z35 1606 aa25.01■■□□□ 1.59
SLC11A1-217ENST00000494322 CDC42BPBQ9Y5S2 1711 aa25.01■■□□□ 1.59
SLC11A1-217ENST00000494322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.99■■□□□ 1.59
SLC11A1-217ENST00000494322 DHX57Q6P158 1386 aaKnown RBP24.98■■□□□ 1.59
SLC11A1-217ENST00000494322 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
SLC11A1-217ENST00000494322 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
SLC11A1-217ENST00000494322 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms