RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TTBK1Q5TCY1 1321 aaPredicted RBP12.23□□□□□ -0.45
RBM39-239ENST00000494274 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
RBM39-239ENST00000494274 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
RBM39-239ENST00000494274 KIAA0586Q9BVV6 1533 aa12.19□□□□□ -0.46
RBM39-239ENST00000494274 NPM1P06748 294 aaKnown RBP eCLIP12.16□□□□□ -0.46
RBM39-239ENST00000494274 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
RBM39-239ENST00000494274 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
RBM39-239ENST00000494274 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
RBM39-239ENST00000494274 CUL7Q14999 1698 aa12.13□□□□□ -0.47
RBM39-239ENST00000494274 PTPRGP23470 1445 aa12.11□□□□□ -0.47
RBM39-239ENST00000494274 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
RBM39-239ENST00000494274 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
RBM39-239ENST00000494274 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
RBM39-239ENST00000494274 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
RBM39-239ENST00000494274 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
RBM39-239ENST00000494274 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
RBM39-239ENST00000494274 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
RBM39-239ENST00000494274 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
RBM39-239ENST00000494274 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
RBM39-239ENST00000494274 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
RBM39-239ENST00000494274 EEA1Q15075 1411 aa11.99□□□□□ -0.49
RBM39-239ENST00000494274 UACAQ9BZF9 1416 aa11.98□□□□□ -0.49
RBM39-239ENST00000494274 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
RBM39-239ENST00000494274 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
RBM39-239ENST00000494274 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
RBM39-239ENST00000494274 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
RBM39-239ENST00000494274 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
RBM39-239ENST00000494274 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
RBM39-239ENST00000494274 ABCC10Q5T3U5 1492 aa11.94□□□□□ -0.5
RBM39-239ENST00000494274 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
RBM39-239ENST00000494274 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
RBM39-239ENST00000494274 ASXL2Q76L83 1435 aa11.92□□□□□ -0.5
RBM39-239ENST00000494274 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
RBM39-239ENST00000494274 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
RBM39-239ENST00000494274 KIAA0556O60303 1618 aa11.9□□□□□ -0.5
RBM39-239ENST00000494274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
RBM39-239ENST00000494274 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
RBM39-239ENST00000494274 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
RBM39-239ENST00000494274 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
RBM39-239ENST00000494274 ATP1B4Q9UN42 357 aaPredicted RBP11.85□□□□□ -0.51
RBM39-239ENST00000494274 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
RBM39-239ENST00000494274 FHOD3Q2V2M9 1422 aa11.83□□□□□ -0.52
RBM39-239ENST00000494274 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
RBM39-239ENST00000494274 EPRSP07814 1512 aaKnown RBP11.81□□□□□ -0.52
RBM39-239ENST00000494274 ATP10BO94823 1461 aa11.79□□□□□ -0.52
RBM39-239ENST00000494274 WDR7Q9Y4E6 1490 aa11.79□□□□□ -0.52
RBM39-239ENST00000494274 PLEKHD1A6NEE1 506 aa11.79□□□□□ -0.52
RBM39-239ENST00000494274 ABCA8O94911 1581 aa11.79□□□□□ -0.52
RBM39-239ENST00000494274 KIF21BO75037 1637 aa11.78□□□□□ -0.52
RBM39-239ENST00000494274 KIF13AQ9H1H9 1805 aa11.77□□□□□ -0.52
RBM39-239ENST00000494274 CD109Q6YHK3 1445 aa11.77□□□□□ -0.53
RBM39-239ENST00000494274 ZCCHC11Q5TAX3 1644 aaKnown RBP11.76□□□□□ -0.53
RBM39-239ENST00000494274 GLI2P10070 1586 aa11.75□□□□□ -0.53
RBM39-239ENST00000494274 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
RBM39-239ENST00000494274 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
RBM39-239ENST00000494274 TEX14Q8IWB6 1497 aa11.7□□□□□ -0.54
RBM39-239ENST00000494274 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
RBM39-239ENST00000494274 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
RBM39-239ENST00000494274 TSPOAP1O95153 1857 aa11.7□□□□□ -0.54
RBM39-239ENST00000494274 KDM6BO15054 1643 aa11.7□□□□□ -0.54
RBM39-239ENST00000494274 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
RBM39-239ENST00000494274 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
RBM39-239ENST00000494274 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
RBM39-239ENST00000494274 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
RBM39-239ENST00000494274 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
RBM39-239ENST00000494274 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
RBM39-239ENST00000494274 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
RBM39-239ENST00000494274 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
RBM39-239ENST00000494274 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
RBM39-239ENST00000494274 CLIP1P30622 1438 aa11.64□□□□□ -0.55
RBM39-239ENST00000494274 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
RBM39-239ENST00000494274 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
RBM39-239ENST00000494274 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
RBM39-239ENST00000494274 EFCAB2Q5VUJ9 269 aa11.59□□□□□ -0.55
RBM39-239ENST00000494274 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
RBM39-239ENST00000494274 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.56
RBM39-239ENST00000494274 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
RBM39-239ENST00000494274 ARID4BQ4LE39 1312 aaPredicted RBP11.57□□□□□ -0.56
RBM39-239ENST00000494274 NEO1Q92859 1461 aa11.57□□□□□ -0.56
RBM39-239ENST00000494274 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
RBM39-239ENST00000494274 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
RBM39-239ENST00000494274 ABCA9Q8IUA7 1624 aa11.56□□□□□ -0.56
RBM39-239ENST00000494274 PLCH2O75038 1416 aa11.55□□□□□ -0.56
RBM39-239ENST00000494274 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
RBM39-239ENST00000494274 FANCAO15360 1455 aa11.55□□□□□ -0.56
RBM39-239ENST00000494274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
RBM39-239ENST00000494274 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
RBM39-239ENST00000494274 CEP162Q5TB80 1403 aa11.53□□□□□ -0.56
RBM39-239ENST00000494274 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
RBM39-239ENST00000494274 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
RBM39-239ENST00000494274 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
RBM39-239ENST00000494274 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
RBM39-239ENST00000494274 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
RBM39-239ENST00000494274 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
RBM39-239ENST00000494274 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
RBM39-239ENST00000494274 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
RBM39-239ENST00000494274 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
RBM39-239ENST00000494274 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
RBM39-239ENST00000494274 MLECQ14165 292 aa11.48□□□□□ -0.57
RBM39-239ENST00000494274 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms